RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 LRCH3Q96II8 777 aa18.4■□□□□ 0.54
FOXR1-201ENST00000317011 AGBL1Q96MI9 1066 aa18.4■□□□□ 0.54
FOXR1-201ENST00000317011 TTC14Q96N46 770 aa18.4■□□□□ 0.54
FOXR1-201ENST00000317011 UBE2OQ9C0C9 1292 aaKnown RBP18.4■□□□□ 0.54
FOXR1-201ENST00000317011 KATNBL1Q9H079 304 aa18.4■□□□□ 0.54
FOXR1-201ENST00000317011 FAM184BQ9ULE4 1060 aa18.4■□□□□ 0.54
FOXR1-201ENST00000317011 CNPY2Q9Y2B0 182 aa18.4■□□□□ 0.54
FOXR1-201ENST00000317011 CTDP1Q9Y5B0 961 aaPredicted RBP18.4■□□□□ 0.54
FOXR1-201ENST00000317011 MYH4Q9Y623 1939 aa18.39■□□□□ 0.53
FOXR1-201ENST00000317011 TRIM6-TRIM34B2RNG4 842 aa18.39■□□□□ 0.53
FOXR1-201ENST00000317011 PGK1P00558 417 aa18.39■□□□□ 0.53
FOXR1-201ENST00000317011 NEFLP07196 543 aa18.39■□□□□ 0.53
FOXR1-201ENST00000317011 NKX3-2P78367 333 aa18.39■□□□□ 0.53
FOXR1-201ENST00000317011 ACVR2BQ13705 512 aa18.39■□□□□ 0.53
FOXR1-201ENST00000317011 KCTD1Q719H9 257 aa18.39■□□□□ 0.53
FOXR1-201ENST00000317011 RNF180Q86T96 592 aa18.39■□□□□ 0.53
FOXR1-201ENST00000317011 ANKRD35Q8N283 1001 aa18.39■□□□□ 0.53
FOXR1-201ENST00000317011 RILPL2Q969X0 211 aa18.39■□□□□ 0.53
FOXR1-201ENST00000317011 ABHD16BQ9H3Z7 469 aa18.39■□□□□ 0.53
FOXR1-201ENST00000317011 PRR12Q9ULL5 1215 aa18.39■□□□□ 0.53
FOXR1-201ENST00000317011 CCDC171Q6TFL3 1326 aa18.39■□□□□ 0.53
FOXR1-201ENST00000317011 DUSP11O75319 330 aaKnown RBP18.38■□□□□ 0.53
FOXR1-201ENST00000317011 TOP1P11387 765 aaKnown RBP18.38■□□□□ 0.53
FOXR1-201ENST00000317011 MDM2Q00987 491 aaPredicted RBP18.38■□□□□ 0.53
FOXR1-201ENST00000317011 AKNAD1Q5T1N1 836 aa18.38■□□□□ 0.53
FOXR1-201ENST00000317011 DCAF4Q8WV16 495 aa18.38■□□□□ 0.53
FOXR1-201ENST00000317011 TMEM47Q9BQJ4 181 aa18.38■□□□□ 0.53
FOXR1-201ENST00000317011 ACAD9Q9H845 621 aa18.38■□□□□ 0.53
FOXR1-201ENST00000317011 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.38■□□□□ 0.53
FOXR1-201ENST00000317011 SLC4A3P48751 1232 aa18.37■□□□□ 0.53
FOXR1-201ENST00000317011 CNTN2Q02246 1040 aa18.37■□□□□ 0.53
FOXR1-201ENST00000317011 TRIM60Q495X7 471 aa18.37■□□□□ 0.53
FOXR1-201ENST00000317011 FERMT2Q96AC1 680 aa18.37■□□□□ 0.53
FOXR1-201ENST00000317011 TRERF1Q96PN7 1200 aa18.37■□□□□ 0.53
FOXR1-201ENST00000317011 A1CFQ9NQ94 594 aaKnown RBP18.37■□□□□ 0.53
FOXR1-201ENST00000317011 ATP11BQ9Y2G3 1177 aa18.37■□□□□ 0.53
FOXR1-201ENST00000317011 SOWAHBA6NEL2 793 aa18.36■□□□□ 0.53
FOXR1-201ENST00000317011 SNHG28P0DPA3 235 aa18.36■□□□□ 0.53
FOXR1-201ENST00000317011 CST5P28325 142 aaPredicted RBP18.36■□□□□ 0.53
FOXR1-201ENST00000317011 NT5C2P49902 561 aa18.36■□□□□ 0.53
FOXR1-201ENST00000317011 MFAP1P55081 439 aaKnown RBP18.36■□□□□ 0.53
FOXR1-201ENST00000317011 TTBK2Q6IQ55 1244 aa18.36■□□□□ 0.53
FOXR1-201ENST00000317011 ARMCX2Q7L311 632 aa18.36■□□□□ 0.53
FOXR1-201ENST00000317011 RASGRP2Q7LDG7 609 aa18.36■□□□□ 0.53
FOXR1-201ENST00000317011 UPF3AQ9H1J1 476 aaKnown RBP18.36■□□□□ 0.53
FOXR1-201ENST00000317011 RANBP17Q9H2T7 1088 aaKnown RBP18.36■□□□□ 0.53
FOXR1-201ENST00000317011 RNF146Q9NTX7 359 aa18.36■□□□□ 0.53
FOXR1-201ENST00000317011 TRIM43BA6NCK2 446 aa18.35■□□□□ 0.53
FOXR1-201ENST00000317011 ADCY6O43306 1168 aa18.35■□□□□ 0.53
FOXR1-201ENST00000317011 GJA9P57773 515 aa18.35■□□□□ 0.53
FOXR1-201ENST00000317011 TLE2Q04725 743 aa18.35■□□□□ 0.53
FOXR1-201ENST00000317011 CCDC144BQ3MJ40 725 aa18.35■□□□□ 0.53
FOXR1-201ENST00000317011 MFSD6Q6ZSS7 791 aa18.35■□□□□ 0.53
FOXR1-201ENST00000317011 TBC1D10CQ8IV04 446 aa18.35■□□□□ 0.53
FOXR1-201ENST00000317011 CCDC144CPQ8IYA2 1237 aa18.35■□□□□ 0.53
FOXR1-201ENST00000317011 ANKS1AQ92625 1134 aa18.35■□□□□ 0.53
FOXR1-201ENST00000317011 TRIM43Q96BQ3 446 aaPredicted RBP18.35■□□□□ 0.53
FOXR1-201ENST00000317011 LENG1Q96BZ8 264 aaPredicted RBP18.35■□□□□ 0.53
FOXR1-201ENST00000317011 TOX2Q96NM4 488 aa18.35■□□□□ 0.53
FOXR1-201ENST00000317011 PDLIM7Q9NR12 457 aa18.35■□□□□ 0.53
FOXR1-201ENST00000317011 PLXNA1Q9UIW2 1896 aa18.35■□□□□ 0.53
FOXR1-201ENST00000317011 ASTN1O14525 1302 aa18.34■□□□□ 0.53
FOXR1-201ENST00000317011 SYNRGQ9UMZ2 1314 aa18.34■□□□□ 0.53
FOXR1-201ENST00000317011 A0A1W2PQ45 241 aaPredicted RBP18.34■□□□□ 0.53
FOXR1-201ENST00000317011 A0A1W2PQY0 241 aa18.34■□□□□ 0.53
FOXR1-201ENST00000317011 MOXD2PA6NHM9 499 aa18.34■□□□□ 0.53
FOXR1-201ENST00000317011 POTEB2H3BUK9 544 aa18.34■□□□□ 0.53
FOXR1-201ENST00000317011 CTAGE5O15320 804 aa18.34■□□□□ 0.53
FOXR1-201ENST00000317011 ICAM1P05362 532 aa18.34■□□□□ 0.53
FOXR1-201ENST00000317011 ACLYP53396 1101 aa18.34■□□□□ 0.53
FOXR1-201ENST00000317011 SNAP25P60880 206 aa18.34■□□□□ 0.53
FOXR1-201ENST00000317011 HAND2P61296 217 aa18.34■□□□□ 0.53
FOXR1-201ENST00000317011 KCNA10Q16322 511 aa18.34■□□□□ 0.53
FOXR1-201ENST00000317011 MUM1L1Q5H9M0 696 aa18.34■□□□□ 0.53
FOXR1-201ENST00000317011 ANKRD33Q7Z3H0 272 aa18.34■□□□□ 0.53
FOXR1-201ENST00000317011 SH3RF1Q7Z6J0 888 aa18.34■□□□□ 0.53
FOXR1-201ENST00000317011 DGKHQ86XP1 1220 aa18.34■□□□□ 0.53
FOXR1-201ENST00000317011 MORC4Q8TE76 937 aa18.34■□□□□ 0.53
FOXR1-201ENST00000317011 CHMP4CQ96CF2 233 aa18.34■□□□□ 0.53
FOXR1-201ENST00000317011 LBHD1Q9BQE6 289 aaPredicted RBP18.34■□□□□ 0.53
FOXR1-201ENST00000317011 HOMER2Q9NSB8 354 aa18.34■□□□□ 0.53
FOXR1-201ENST00000317011 CYP39A1Q9NYL5 469 aa18.34■□□□□ 0.53
FOXR1-201ENST00000317011 PRKAG2Q9UGJ0 569 aa18.34■□□□□ 0.53
FOXR1-201ENST00000317011 ASB14A6NK59 587 aa18.33■□□□□ 0.52
FOXR1-201ENST00000317011 HIP1O00291 1037 aa18.33■□□□□ 0.52
FOXR1-201ENST00000317011 MYCNP04198 464 aaPredicted RBP18.33■□□□□ 0.52
FOXR1-201ENST00000317011 PDHBP11177 359 aa18.33■□□□□ 0.52
FOXR1-201ENST00000317011 ALAS1P13196 640 aa18.33■□□□□ 0.52
FOXR1-201ENST00000317011 CDK7P50613 346 aa18.33■□□□□ 0.52
FOXR1-201ENST00000317011 IKQ13123 557 aaPredicted RBP18.33■□□□□ 0.52
FOXR1-201ENST00000317011 RRP12Q5JTH9 1297 aaKnown RBP18.33■□□□□ 0.52
FOXR1-201ENST00000317011 CCDC174Q6PII3 467 aa18.33■□□□□ 0.52
FOXR1-201ENST00000317011 DSCC1Q9BVC3 393 aa18.33■□□□□ 0.52
FOXR1-201ENST00000317011 RNF41Q9H4P4 317 aaPredicted RBP18.33■□□□□ 0.52
FOXR1-201ENST00000317011 TOMM22Q9NS69 142 aa18.33■□□□□ 0.52
FOXR1-201ENST00000317011 ZHX1Q9UKY1 873 aaPredicted RBP18.33■□□□□ 0.52
FOXR1-201ENST00000317011 ELP1O95163 1332 aa18.32■□□□□ 0.52
FOXR1-201ENST00000317011 MYADML2A6NDP7 307 aa18.32■□□□□ 0.52
FOXR1-201ENST00000317011 ZNF213O14771 459 aa18.32■□□□□ 0.52
FOXR1-201ENST00000317011 KIAA0355O15063 1070 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms