RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 TROAPQ12815 778 aa14.1□□□□□ -0.15
SCFD1-201ENST00000311943 IRF5Q13568 498 aa14.1□□□□□ -0.15
SCFD1-201ENST00000311943 WTAPQ15007 396 aa14.1□□□□□ -0.15
SCFD1-201ENST00000311943 USH1GQ495M9 461 aa14.1□□□□□ -0.15
SCFD1-201ENST00000311943 ADGRF4Q8IZF3 695 aa14.1□□□□□ -0.15
SCFD1-201ENST00000311943 MB21D1Q8N884 522 aa14.1□□□□□ -0.15
SCFD1-201ENST00000311943 TRPV1Q8NER1 839 aa14.1□□□□□ -0.15
SCFD1-201ENST00000311943 FGD4Q96M96 766 aa14.1□□□□□ -0.15
SCFD1-201ENST00000311943 NEK1Q96PY6 1258 aa14.1□□□□□ -0.15
SCFD1-201ENST00000311943 GTF3C3Q9Y5Q9 886 aa14.1□□□□□ -0.15
SCFD1-201ENST00000311943 EXOSC10Q01780 885 aaKnown RBP14.1□□□□□ -0.15
SCFD1-201ENST00000311943 CACNB2Q08289 660 aaPredicted RBP14.1□□□□□ -0.15
SCFD1-201ENST00000311943 ARHGEF6Q15052 776 aa14.1□□□□□ -0.15
SCFD1-201ENST00000311943 BTNL9Q6UXG8 535 aa14.1□□□□□ -0.15
SCFD1-201ENST00000311943 CCDC82Q8N4S0 544 aa14.1□□□□□ -0.15
SCFD1-201ENST00000311943 GTF3C2Q8WUA4 911 aaPredicted RBP14.1□□□□□ -0.15
SCFD1-201ENST00000311943 SHISA4Q96DD7 197 aa14.1□□□□□ -0.15
SCFD1-201ENST00000311943 JAKMIP1Q96N16 626 aaKnown RBP14.1□□□□□ -0.15
SCFD1-201ENST00000311943 MMP19Q99542 508 aa14.1□□□□□ -0.15
SCFD1-201ENST00000311943 RNF208Q9H0X6 261 aa14.1□□□□□ -0.15
SCFD1-201ENST00000311943 RANBP17Q9H2T7 1088 aaKnown RBP14.1□□□□□ -0.15
SCFD1-201ENST00000311943 IVNS1ABPQ9Y6Y0 642 aa14.1□□□□□ -0.15
SCFD1-201ENST00000311943 IRX5P78411 483 aaPredicted RBP14.09□□□□□ -0.15
SCFD1-201ENST00000311943 DPP9Q86TI2 863 aa14.09□□□□□ -0.15
SCFD1-201ENST00000311943 CHURC1Q8WUH1 139 aa14.09□□□□□ -0.15
SCFD1-201ENST00000311943 JMJD4Q9H9V9 463 aa14.09□□□□□ -0.15
SCFD1-201ENST00000311943 SLC15A5A6NIM6 579 aa14.08□□□□□ -0.15
SCFD1-201ENST00000311943 KLRF2D3W0D1 207 aa14.08□□□□□ -0.15
SCFD1-201ENST00000311943 PLEKHA8P1O95397 391 aa14.08□□□□□ -0.15
SCFD1-201ENST00000311943 FCER1AP12319 257 aa14.08□□□□□ -0.15
SCFD1-201ENST00000311943 PRKAR2AP13861 404 aaKnown RBP14.08□□□□□ -0.15
SCFD1-201ENST00000311943 FAM160B2Q86V87 743 aa14.08□□□□□ -0.15
SCFD1-201ENST00000311943 SLAIN1Q8ND83 568 aa14.08□□□□□ -0.15
SCFD1-201ENST00000311943 LENG1Q96BZ8 264 aaPredicted RBP14.08□□□□□ -0.15
SCFD1-201ENST00000311943 DEFB118Q96PH6 123 aa14.08□□□□□ -0.15
SCFD1-201ENST00000311943 TRERF1Q96PN7 1200 aa14.08□□□□□ -0.15
SCFD1-201ENST00000311943 UPF3BQ9BZI7 483 aaKnown RBP14.08□□□□□ -0.15
SCFD1-201ENST00000311943 A1CFQ9NQ94 594 aaKnown RBP14.08□□□□□ -0.15
SCFD1-201ENST00000311943 RNF146Q9NTX7 359 aa14.08□□□□□ -0.15
SCFD1-201ENST00000311943 CCPG1Q9ULG6 757 aa14.08□□□□□ -0.15
SCFD1-201ENST00000311943 RBAK-RBAKDNI3L0D1 243 aa14.08□□□□□ -0.16
SCFD1-201ENST00000311943 DHX16O60231 1041 aaKnown RBP14.08□□□□□ -0.16
SCFD1-201ENST00000311943 PARP1P09874 1014 aaKnown RBP14.08□□□□□ -0.16
SCFD1-201ENST00000311943 MCM5P33992 734 aa14.08□□□□□ -0.16
SCFD1-201ENST00000311943 RGS2P41220 211 aa14.08□□□□□ -0.16
SCFD1-201ENST00000311943 PRMT2P55345 433 aa14.08□□□□□ -0.16
SCFD1-201ENST00000311943 TMEM63BQ5T3F8 832 aa14.08□□□□□ -0.16
SCFD1-201ENST00000311943 HOMER1Q86YM7 354 aa14.08□□□□□ -0.16
SCFD1-201ENST00000311943 ZNF654Q8IZM8 581 aa14.08□□□□□ -0.16
SCFD1-201ENST00000311943 SHCBP1Q8NEM2 672 aa14.08□□□□□ -0.16
SCFD1-201ENST00000311943 PXYLP1Q8TE99 480 aa14.08□□□□□ -0.16
SCFD1-201ENST00000311943 KCNB2Q92953 911 aa14.08□□□□□ -0.16
SCFD1-201ENST00000311943 MAML3Q96JK9 1138 aa14.08□□□□□ -0.16
SCFD1-201ENST00000311943 APBA2Q99767 749 aa14.08□□□□□ -0.16
SCFD1-201ENST00000311943 MROH8Q9H579 483 aa14.08□□□□□ -0.16
SCFD1-201ENST00000311943 CTDP1Q9Y5B0 961 aaPredicted RBP14.08□□□□□ -0.16
SCFD1-201ENST00000311943 PALM3A6NDB9 673 aaPredicted RBP14.07□□□□□ -0.16
SCFD1-201ENST00000311943 ATP2A1O14983 1001 aa14.07□□□□□ -0.16
SCFD1-201ENST00000311943 CDC37Q16543 378 aaPredicted RBP14.07□□□□□ -0.16
SCFD1-201ENST00000311943 QRICH1Q2TAL8 776 aa14.07□□□□□ -0.16
SCFD1-201ENST00000311943 SOCS4Q8WXH5 440 aa14.07□□□□□ -0.16
SCFD1-201ENST00000311943 CLEC4DQ8WXI8 215 aa14.07□□□□□ -0.16
SCFD1-201ENST00000311943 IGHA2P01877 340 aa14.07□□□□□ -0.16
SCFD1-201ENST00000311943 HMGCRP04035 888 aa14.07□□□□□ -0.16
SCFD1-201ENST00000311943 ZKSCAN1P17029 563 aaPredicted RBP14.07□□□□□ -0.16
SCFD1-201ENST00000311943 ZNF792Q3KQV3 632 aa14.07□□□□□ -0.16
SCFD1-201ENST00000311943 C8orf34Q49A92 452 aa14.07□□□□□ -0.16
SCFD1-201ENST00000311943 NSMFQ6X4W1 530 aa14.07□□□□□ -0.16
SCFD1-201ENST00000311943 SLC30A10Q6XR72 485 aa14.07□□□□□ -0.16
SCFD1-201ENST00000311943 NFXL1Q6ZNB6 911 aa14.07□□□□□ -0.16
SCFD1-201ENST00000311943 PIGSQ96S52 555 aa14.07□□□□□ -0.16
SCFD1-201ENST00000311943 DNAJC25-GNG10A0A024R161 153 aa14.06□□□□□ -0.16
SCFD1-201ENST00000311943 ERICH2A1L162 156 aa14.06□□□□□ -0.16
SCFD1-201ENST00000311943 SOWAHBA6NEL2 793 aa14.06□□□□□ -0.16
SCFD1-201ENST00000311943 PLA2G6O60733 806 aa14.06□□□□□ -0.16
SCFD1-201ENST00000311943 SLC25A27O95847 323 aa14.06□□□□□ -0.16
SCFD1-201ENST00000311943 ICAM1P05362 532 aa14.06□□□□□ -0.16
SCFD1-201ENST00000311943 APOBRQ0VD83 1088 aa14.06□□□□□ -0.16
SCFD1-201ENST00000311943 KCTD2Q14681 263 aa14.06□□□□□ -0.16
SCFD1-201ENST00000311943 GRM4Q14833 912 aa14.06□□□□□ -0.16
SCFD1-201ENST00000311943 TSGA10IPQ3SY00 556 aa14.06□□□□□ -0.16
SCFD1-201ENST00000311943 DHX32Q7L7V1 743 aaKnown RBP14.06□□□□□ -0.16
SCFD1-201ENST00000311943 MICU3Q86XE3 530 aa14.06□□□□□ -0.16
SCFD1-201ENST00000311943 ANKRD35Q8N283 1001 aa14.06□□□□□ -0.16
SCFD1-201ENST00000311943 DIS3LQ8TF46 1054 aaKnown RBP14.06□□□□□ -0.16
SCFD1-201ENST00000311943 DDX11Q96FC9 970 aa14.06□□□□□ -0.16
SCFD1-201ENST00000311943 LCTP09848 1927 aa14.06□□□□□ -0.16
SCFD1-201ENST00000311943 MCM3APO60318 1980 aa14.06□□□□□ -0.16
SCFD1-201ENST00000311943 OPLAHO14841 1288 aa14.05□□□□□ -0.16
SCFD1-201ENST00000311943 HOXC6P09630 235 aa14.05□□□□□ -0.16
SCFD1-201ENST00000311943 XRCC5P13010 732 aaKnown RBP14.05□□□□□ -0.16
SCFD1-201ENST00000311943 CASTP20810 708 aaKnown RBP14.05□□□□□ -0.16
SCFD1-201ENST00000311943 PPP4R3BQ5MIZ7 849 aa14.05□□□□□ -0.16
SCFD1-201ENST00000311943 MAP3K21Q5TCX8 1036 aa14.05□□□□□ -0.16
SCFD1-201ENST00000311943 RNF20Q5VTR2 975 aa14.05□□□□□ -0.16
SCFD1-201ENST00000311943 Q6ZUG5 572 aa14.05□□□□□ -0.16
SCFD1-201ENST00000311943 SRBD1Q8N5C6 995 aaKnown RBP14.05□□□□□ -0.16
SCFD1-201ENST00000311943 ZFP91Q96JP5 570 aaPredicted RBP14.05□□□□□ -0.16
SCFD1-201ENST00000311943 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.05□□□□□ -0.16
SCFD1-201ENST00000311943 PLXNA1Q9UIW2 1896 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms