RNA–Protein interactions for RNA: ENST00000306593.1

PCDHGC4-201, Transcript of protocadherin gamma subfamily C, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC4, Length 4,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4-201ENST00000306593 SERPINB13Q9UIV8 391 aa12.14□□□□□ -0.47
PCDHGC4-201ENST00000306593 PDS5AQ29RF7 1337 aaKnown RBP12.13□□□□□ -0.47
PCDHGC4-201ENST00000306593 FOSP01100 380 aaPredicted RBP12.13□□□□□ -0.47
PCDHGC4-201ENST00000306593 KCNQ4P56696 695 aa12.13□□□□□ -0.47
PCDHGC4-201ENST00000306593 TTLL12Q14166 644 aaPredicted RBP12.13□□□□□ -0.47
PCDHGC4-201ENST00000306593 DIXDC1Q155Q3 683 aa12.13□□□□□ -0.47
PCDHGC4-201ENST00000306593 SH3RF3Q8TEJ3 882 aaPredicted RBP12.13□□□□□ -0.47
PCDHGC4-201ENST00000306593 SECISBP2LQ93073 1101 aaKnown RBP12.13□□□□□ -0.47
PCDHGC4-201ENST00000306593 DYNLL2Q96FJ2 89 aa12.13□□□□□ -0.47
PCDHGC4-201ENST00000306593 SAMM50Q9Y512 469 aa12.13□□□□□ -0.47
PCDHGC4-201ENST00000306593 TCRBV5S4A2TA0A5A2 114 aa12.13□□□□□ -0.47
PCDHGC4-201ENST00000306593 SEPT2Q15019 361 aa12.13□□□□□ -0.47
PCDHGC4-201ENST00000306593 BRD3Q15059 726 aa12.13□□□□□ -0.47
PCDHGC4-201ENST00000306593 SLC9C1Q4G0N8 1177 aa12.13□□□□□ -0.47
PCDHGC4-201ENST00000306593 MYOCDQ8IZQ8 938 aa12.13□□□□□ -0.47
PCDHGC4-201ENST00000306593 DHX36Q9H2U1 1008 aaKnown RBP12.13□□□□□ -0.47
PCDHGC4-201ENST00000306593 SAMSN1Q9NSI8 373 aaKnown RBP12.13□□□□□ -0.47
PCDHGC4-201ENST00000306593 TSKSQ9UJT2 592 aa12.13□□□□□ -0.47
PCDHGC4-201ENST00000306593 PCDHA12Q9UN75 941 aa12.13□□□□□ -0.47
PCDHGC4-201ENST00000306593 PPP4R3AQ6IN85 833 aa12.13□□□□□ -0.47
PCDHGC4-201ENST00000306593 METTL16Q86W50 562 aaKnown RBP12.13□□□□□ -0.47
PCDHGC4-201ENST00000306593 SLF1Q9BQI6 1058 aa12.13□□□□□ -0.47
PCDHGC4-201ENST00000306593 ERICH4A6NGS2 130 aa12.12□□□□□ -0.47
PCDHGC4-201ENST00000306593 HERC4Q5GLZ8 1057 aaPredicted RBP12.12□□□□□ -0.47
PCDHGC4-201ENST00000306593 C12orf60Q5U649 245 aa12.12□□□□□ -0.47
PCDHGC4-201ENST00000306593 DYMQ7RTS9 669 aa12.12□□□□□ -0.47
PCDHGC4-201ENST00000306593 LRRC47Q8N1G4 583 aaKnown RBP12.12□□□□□ -0.47
PCDHGC4-201ENST00000306593 CD209Q9NNX6 404 aa12.12□□□□□ -0.47
PCDHGC4-201ENST00000306593 DDX25Q9UHL0 483 aaKnown RBP12.12□□□□□ -0.47
PCDHGC4-201ENST00000306593 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.12□□□□□ -0.47
PCDHGC4-201ENST00000306593 FRMPD2Q68DX3 1309 aaPredicted RBP12.12□□□□□ -0.47
PCDHGC4-201ENST00000306593 TMCO5BA8MYB1 307 aa12.12□□□□□ -0.47
PCDHGC4-201ENST00000306593 GTF2F1P35269 517 aaKnown RBP eCLIP12.12□□□□□ -0.47
PCDHGC4-201ENST00000306593 CETN2P41208 172 aa12.12□□□□□ -0.47
PCDHGC4-201ENST00000306593 SLC27A3Q5K4L6 730 aa12.12□□□□□ -0.47
PCDHGC4-201ENST00000306593 PPP1R18Q6NYC8 613 aa12.12□□□□□ -0.47
PCDHGC4-201ENST00000306593 VGLL2Q8N8G2 317 aa12.12□□□□□ -0.47
PCDHGC4-201ENST00000306593 LINC00116Q8NCU8 138 aa12.12□□□□□ -0.47
PCDHGC4-201ENST00000306593 P2RX5Q93086 422 aa12.12□□□□□ -0.47
PCDHGC4-201ENST00000306593 GOPCQ9HD26 462 aa12.12□□□□□ -0.47
PCDHGC4-201ENST00000306593 SUGT1Q9Y2Z0 365 aa12.12□□□□□ -0.47
PCDHGC4-201ENST00000306593 USP17L3A6NCW0 530 aa12.12□□□□□ -0.47
PCDHGC4-201ENST00000306593 USP17L4A6NCW7 530 aa12.12□□□□□ -0.47
PCDHGC4-201ENST00000306593 ATP8B1O43520 1251 aa12.12□□□□□ -0.47
PCDHGC4-201ENST00000306593 CYP2D6P10635 497 aa12.12□□□□□ -0.47
PCDHGC4-201ENST00000306593 CASP14P31944 242 aa12.12□□□□□ -0.47
PCDHGC4-201ENST00000306593 GUCY1A2P33402 732 aa12.12□□□□□ -0.47
PCDHGC4-201ENST00000306593 CERKLQ49MI3 558 aaPredicted RBP12.12□□□□□ -0.47
PCDHGC4-201ENST00000306593 USP17L1Q7RTZ2 530 aa12.12□□□□□ -0.47
PCDHGC4-201ENST00000306593 RBL2Q08999 1139 aa12.12□□□□□ -0.47
PCDHGC4-201ENST00000306593 LARP4BQ92615 738 aaKnown RBP12.12□□□□□ -0.47
PCDHGC4-201ENST00000306593 TMEM47Q9BQJ4 181 aa12.12□□□□□ -0.47
PCDHGC4-201ENST00000306593 NPR1P16066 1061 aa12.11□□□□□ -0.47
PCDHGC4-201ENST00000306593 MCM6Q14566 821 aa12.11□□□□□ -0.47
PCDHGC4-201ENST00000306593 RASGRP4Q8TDF6 673 aa12.11□□□□□ -0.47
PCDHGC4-201ENST00000306593 TBCKQ8TEA7 893 aa12.11□□□□□ -0.47
PCDHGC4-201ENST00000306593 TSC1Q92574 1164 aa12.11□□□□□ -0.47
PCDHGC4-201ENST00000306593 CNKSR1Q969H4 720 aa12.11□□□□□ -0.47
PCDHGC4-201ENST00000306593 RIC8AQ9NPQ8 531 aa12.11□□□□□ -0.47
PCDHGC4-201ENST00000306593 NEFHP12036 1026 aa12.11□□□□□ -0.47
PCDHGC4-201ENST00000306593 CCNE1P24864 410 aa12.11□□□□□ -0.47
PCDHGC4-201ENST00000306593 PSMD2Q13200 908 aa12.11□□□□□ -0.47
PCDHGC4-201ENST00000306593 PIGSQ96S52 555 aa12.11□□□□□ -0.47
PCDHGC4-201ENST00000306593 TUBGCP2Q9BSJ2 902 aa12.11□□□□□ -0.47
PCDHGC4-201ENST00000306593 DESI2Q9BSY9 194 aa12.11□□□□□ -0.47
PCDHGC4-201ENST00000306593 KANSL2Q9H9L4 492 aa12.11□□□□□ -0.47
PCDHGC4-201ENST00000306593 BARHL2Q9NY43 387 aa12.11□□□□□ -0.47
PCDHGC4-201ENST00000306593 EPN1Q9Y6I3 576 aaPredicted RBP12.11□□□□□ -0.47
PCDHGC4-201ENST00000306593 SHTN1A0MZ66 631 aa12.11□□□□□ -0.47
PCDHGC4-201ENST00000306593 OPA1O60313 960 aa12.11□□□□□ -0.47
PCDHGC4-201ENST00000306593 ERCC6LQ2NKX8 1250 aa12.11□□□□□ -0.47
PCDHGC4-201ENST00000306593 RABGGTAQ92696 567 aa12.11□□□□□ -0.47
PCDHGC4-201ENST00000306593 NOX5Q96PH1 765 aa12.11□□□□□ -0.47
PCDHGC4-201ENST00000306593 STK32BQ9NY57 414 aa12.11□□□□□ -0.47
PCDHGC4-201ENST00000306593 ATRNO75882 1429 aa12.11□□□□□ -0.47
PCDHGC4-201ENST00000306593 HSF2BPO75031 334 aa12.1□□□□□ -0.47
PCDHGC4-201ENST00000306593 RHOXF2BP0C7M4 288 aa12.1□□□□□ -0.47
PCDHGC4-201ENST00000306593 PTPAQ15257 358 aa12.1□□□□□ -0.47
PCDHGC4-201ENST00000306593 TRIM58Q8NG06 486 aa12.1□□□□□ -0.47
PCDHGC4-201ENST00000306593 RHOXF2Q9BQY4 288 aa12.1□□□□□ -0.47
PCDHGC4-201ENST00000306593 VEZTQ9HBM0 779 aa12.1□□□□□ -0.47
PCDHGC4-201ENST00000306593 GOLGA6L10A0A0M3HER8 536 aa12.1□□□□□ -0.47
PCDHGC4-201ENST00000306593 MACROD2A1Z1Q3 448 aa12.1□□□□□ -0.47
PCDHGC4-201ENST00000306593 KIAA0754O94854 1291 aa12.1□□□□□ -0.47
PCDHGC4-201ENST00000306593 ARID5BQ14865 1188 aa12.1□□□□□ -0.47
PCDHGC4-201ENST00000306593 NCAPH2Q6IBW4 605 aa12.1□□□□□ -0.47
PCDHGC4-201ENST00000306593 NEDD1Q8NHV4 660 aa12.1□□□□□ -0.47
PCDHGC4-201ENST00000306593 CHURC1Q8WUH1 139 aa12.1□□□□□ -0.47
PCDHGC4-201ENST00000306593 FAM107BQ9H098 131 aa12.1□□□□□ -0.47
PCDHGC4-201ENST00000306593 FRMD4BQ9Y2L6 1034 aa12.1□□□□□ -0.47
PCDHGC4-201ENST00000306593 RIC1Q4ADV7 1423 aa12.1□□□□□ -0.47
PCDHGC4-201ENST00000306593 PNMA6FA0A0J9YX94 578 aa12.1□□□□□ -0.47
PCDHGC4-201ENST00000306593 ICA1Q05084 483 aa12.1□□□□□ -0.47
PCDHGC4-201ENST00000306593 TCP11X2Q5H9J9 407 aa12.1□□□□□ -0.47
PCDHGC4-201ENST00000306593 SLFN13Q68D06 897 aa12.1□□□□□ -0.47
PCDHGC4-201ENST00000306593 CNOT6LQ96LI5 555 aaKnown RBP12.1□□□□□ -0.47
PCDHGC4-201ENST00000306593 DRC1Q96MC2 740 aa12.1□□□□□ -0.47
PCDHGC4-201ENST00000306593 SPZ1Q9BXG8 430 aa12.1□□□□□ -0.47
PCDHGC4-201ENST00000306593 TSPYL1Q9H0U9 437 aa12.1□□□□□ -0.47
PCDHGC4-201ENST00000306593 HPSEQ9Y251 543 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms