RNA–Protein interactions for RNA: ENST00000300213.8

CCNDBP1-201, Transcript of cyclin D1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNDBP1, Length 3,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-201ENST00000300213 TEX11Q8IYF3 940 aa16.34■□□□□ 0.21
CCNDBP1-201ENST00000300213 TRIM58Q8NG06 486 aa16.34■□□□□ 0.21
CCNDBP1-201ENST00000300213 UPP2O95045 317 aa16.34■□□□□ 0.21
CCNDBP1-201ENST00000300213 RPN1P04843 607 aaKnown RBP16.34■□□□□ 0.21
CCNDBP1-201ENST00000300213 PTGISQ16647 500 aa16.34■□□□□ 0.21
CCNDBP1-201ENST00000300213 TTC38Q5R3I4 469 aa16.34■□□□□ 0.21
CCNDBP1-201ENST00000300213 KSR1Q8IVT5 923 aa16.34■□□□□ 0.21
CCNDBP1-201ENST00000300213 MAGEB6Q8N7X4 407 aa16.34■□□□□ 0.21
CCNDBP1-201ENST00000300213 AENQ8WTP8 325 aaKnown RBP16.34■□□□□ 0.21
CCNDBP1-201ENST00000300213 TMEM87BQ96K49 555 aa16.34■□□□□ 0.21
CCNDBP1-201ENST00000300213 STRN4Q9NRL3 753 aa16.34■□□□□ 0.21
CCNDBP1-201ENST00000300213 ABCF2Q9UG63 623 aa16.34■□□□□ 0.21
CCNDBP1-201ENST00000300213 SNX12Q9UMY4 172 aa16.34■□□□□ 0.21
CCNDBP1-201ENST00000300213 STK38LQ9Y2H1 464 aa16.34■□□□□ 0.21
CCNDBP1-201ENST00000300213 SNAP23O00161 211 aa16.34■□□□□ 0.21
CCNDBP1-201ENST00000300213 FMNL1O95466 1100 aaPredicted RBP16.34■□□□□ 0.21
CCNDBP1-201ENST00000300213 EHHADHQ08426 723 aa16.34■□□□□ 0.21
CCNDBP1-201ENST00000300213 PAK2Q13177 524 aa16.34■□□□□ 0.21
CCNDBP1-201ENST00000300213 LY9Q9HBG7 655 aa16.34■□□□□ 0.21
CCNDBP1-201ENST00000300213 UBA7P41226 1012 aa16.33■□□□□ 0.21
CCNDBP1-201ENST00000300213 IFIT5Q13325 482 aaKnown RBP16.33■□□□□ 0.21
CCNDBP1-201ENST00000300213 MSL3Q8N5Y2 521 aaKnown RBP16.33■□□□□ 0.21
CCNDBP1-201ENST00000300213 FAM167BQ9BTA0 163 aa16.33■□□□□ 0.21
CCNDBP1-201ENST00000300213 NOVA2Q9UNW9 492 aaKnown RBP16.33■□□□□ 0.21
CCNDBP1-201ENST00000300213 HYOU1Q9Y4L1 999 aa16.33■□□□□ 0.21
CCNDBP1-201ENST00000300213 DLC1Q96QB1 1528 aa16.33■□□□□ 0.21
CCNDBP1-201ENST00000300213 USP31Q70CQ4 1352 aa16.33■□□□□ 0.21
CCNDBP1-201ENST00000300213 SRCAPQ6ZRS2 3230 aa16.33■□□□□ 0.2
CCNDBP1-201ENST00000300213 GLI1P08151 1106 aa16.33■□□□□ 0.2
CCNDBP1-201ENST00000300213 MDH1P40925 334 aaKnown RBP16.33■□□□□ 0.2
CCNDBP1-201ENST00000300213 PAPD7Q5XG87 772 aaKnown RBP16.33■□□□□ 0.2
CCNDBP1-201ENST00000300213 ALS2CLQ60I27 953 aa16.33■□□□□ 0.2
CCNDBP1-201ENST00000300213 DDX42Q86XP3 938 aaKnown RBP eCLIP16.33■□□□□ 0.2
CCNDBP1-201ENST00000300213 CYFIP2Q96F07 1278 aa16.33■□□□□ 0.2
CCNDBP1-201ENST00000300213 TPX2Q9ULW0 747 aaKnown RBP16.33■□□□□ 0.2
CCNDBP1-201ENST00000300213 L3MBTL1Q9Y468 752 aa16.33■□□□□ 0.2
CCNDBP1-201ENST00000300213 PP2D1A8MPX8 630 aa16.33■□□□□ 0.2
CCNDBP1-201ENST00000300213 EIF4A3P38919 411 aaKnown RBP16.33■□□□□ 0.2
CCNDBP1-201ENST00000300213 TAF4BQ92750 862 aa16.33■□□□□ 0.2
CCNDBP1-201ENST00000300213 YIPF3Q9GZM5 350 aa16.33■□□□□ 0.2
CCNDBP1-201ENST00000300213 VCPKMTQ9H867 229 aa16.33■□□□□ 0.2
CCNDBP1-201ENST00000300213 KIF9Q9HAQ2 790 aa16.33■□□□□ 0.2
CCNDBP1-201ENST00000300213 MYO5BQ9ULV0 1848 aa16.33■□□□□ 0.2
CCNDBP1-201ENST00000300213 SIGLEC1Q9BZZ2 1709 aa16.32■□□□□ 0.2
CCNDBP1-201ENST00000300213 EMBQ6PCB8 327 aa16.32■□□□□ 0.2
CCNDBP1-201ENST00000300213 PBX1P40424 430 aa16.32■□□□□ 0.2
CCNDBP1-201ENST00000300213 PMS1P54277 932 aaKnown RBP16.32■□□□□ 0.2
CCNDBP1-201ENST00000300213 TCIRG1Q13488 830 aa16.32■□□□□ 0.2
CCNDBP1-201ENST00000300213 NTRK3Q16288 839 aa16.32■□□□□ 0.2
CCNDBP1-201ENST00000300213 KRT71Q3SY84 523 aa16.32■□□□□ 0.2
CCNDBP1-201ENST00000300213 CFAP221Q4G0U5 840 aa16.32■□□□□ 0.2
CCNDBP1-201ENST00000300213 TRIM68Q6AZZ1 485 aa16.32■□□□□ 0.2
CCNDBP1-201ENST00000300213 EXOC1Q9NV70 894 aa16.32■□□□□ 0.2
CCNDBP1-201ENST00000300213 JCADQ9P266 1359 aa16.32■□□□□ 0.2
CCNDBP1-201ENST00000300213 WNT7AO00755 349 aa16.32■□□□□ 0.2
CCNDBP1-201ENST00000300213 IFNAR2P48551 515 aa16.32■□□□□ 0.2
CCNDBP1-201ENST00000300213 SMTNP53814 917 aa16.32■□□□□ 0.2
CCNDBP1-201ENST00000300213 MAEAQ7L5Y9 396 aa16.32■□□□□ 0.2
CCNDBP1-201ENST00000300213 FANCBQ8NB91 859 aa16.32■□□□□ 0.2
CCNDBP1-201ENST00000300213 RWDD2AQ9UIY3 292 aa16.32■□□□□ 0.2
CCNDBP1-201ENST00000300213 FOXP2O15409 715 aa16.31■□□□□ 0.2
CCNDBP1-201ENST00000300213 VIMP08670 466 aaKnown RBP16.31■□□□□ 0.2
CCNDBP1-201ENST00000300213 PRPF4BQ13523 1007 aaKnown RBP16.31■□□□□ 0.2
CCNDBP1-201ENST00000300213 ACCSLQ4AC99 568 aa16.31■□□□□ 0.2
CCNDBP1-201ENST00000300213 RASGRP4Q8TDF6 673 aa16.31■□□□□ 0.2
CCNDBP1-201ENST00000300213 IGDCC4Q8TDY8 1250 aa16.31■□□□□ 0.2
CCNDBP1-201ENST00000300213 HPS3Q969F9 1004 aa16.31■□□□□ 0.2
CCNDBP1-201ENST00000300213 SH3GL2Q99962 352 aa16.31■□□□□ 0.2
CCNDBP1-201ENST00000300213 FOXP1Q9H334 677 aaPredicted RBP16.31■□□□□ 0.2
CCNDBP1-201ENST00000300213 FAM217BQ9NTX9 383 aaPredicted RBP16.31■□□□□ 0.2
CCNDBP1-201ENST00000300213 LIMA1Q9UHB6 759 aaKnown RBP16.31■□□□□ 0.2
CCNDBP1-201ENST00000300213 PHF8Q9UPP1 1060 aa16.31■□□□□ 0.2
CCNDBP1-201ENST00000300213 PCDHA13Q9Y5I0 950 aa16.31■□□□□ 0.2
CCNDBP1-201ENST00000300213 NCAPD2Q15021 1401 aa16.31■□□□□ 0.2
CCNDBP1-201ENST00000300213 ZC3H4Q9UPT8 1303 aaKnown RBP16.31■□□□□ 0.2
CCNDBP1-201ENST00000300213 ZNF233A6NK53 670 aa16.31■□□□□ 0.2
CCNDBP1-201ENST00000300213 FSBPO95073 299 aa16.31■□□□□ 0.2
CCNDBP1-201ENST00000300213 IFNAR1P17181 557 aa16.31■□□□□ 0.2
CCNDBP1-201ENST00000300213 FNTAP49354 379 aa16.31■□□□□ 0.2
CCNDBP1-201ENST00000300213 ASIC1P78348 528 aa16.31■□□□□ 0.2
CCNDBP1-201ENST00000300213 WDR59Q6PJI9 974 aa16.31■□□□□ 0.2
CCNDBP1-201ENST00000300213 CREG2Q8IUH2 290 aa16.31■□□□□ 0.2
CCNDBP1-201ENST00000300213 ARFGAP2Q8N6H7 521 aa16.31■□□□□ 0.2
CCNDBP1-201ENST00000300213 MCM8Q9UJA3 840 aa16.31■□□□□ 0.2
CCNDBP1-201ENST00000300213 MLH3Q9UHC1 1453 aa16.31■□□□□ 0.2
CCNDBP1-201ENST00000300213 XRN1Q8IZH2 1706 aaKnown RBP16.31■□□□□ 0.2
CCNDBP1-201ENST00000300213 HECW2Q9P2P5 1572 aa16.31■□□□□ 0.2
CCNDBP1-201ENST00000300213 ADAT2Q7Z6V5 191 aaKnown RBP16.31■□□□□ 0.2
CCNDBP1-201ENST00000300213 ZNF654Q8IZM8 581 aa16.31■□□□□ 0.2
CCNDBP1-201ENST00000300213 SYNE4Q8N205 404 aa16.31■□□□□ 0.2
CCNDBP1-201ENST00000300213 MDM1Q8TC05 714 aa16.31■□□□□ 0.2
CCNDBP1-201ENST00000300213 CCDC47Q96A33 483 aaKnown RBP16.31■□□□□ 0.2
CCNDBP1-201ENST00000300213 ZBTB10Q96DT7 871 aa16.31■□□□□ 0.2
CCNDBP1-201ENST00000300213 CARD10Q9BWT7 1032 aa16.31■□□□□ 0.2
CCNDBP1-201ENST00000300213 RMND1Q9NWS8 449 aa16.31■□□□□ 0.2
CCNDBP1-201ENST00000300213 PPP1R12AO14974 1030 aaPredicted RBP16.3■□□□□ 0.2
CCNDBP1-201ENST00000300213 PREPLQ4J6C6 727 aaPredicted RBP16.3■□□□□ 0.2
CCNDBP1-201ENST00000300213 NT5DC1Q5TFE4 455 aa16.3■□□□□ 0.2
CCNDBP1-201ENST00000300213 GKAP1Q5VSY0 366 aaPredicted RBP16.3■□□□□ 0.2
CCNDBP1-201ENST00000300213 CRACR2BQ8N4Y2 399 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms