RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 PCDHA4Q9UN74 947 aa11.38□□□□□ -0.59
FOXN4-201ENST00000299162 SCAF8Q9UPN6 1271 aaKnown RBP11.38□□□□□ -0.59
FOXN4-201ENST00000299162 SSBP05455 408 aaKnown RBP eCLIP11.38□□□□□ -0.59
FOXN4-201ENST00000299162 PNMA6AP0CW24 399 aaPredicted RBP11.38□□□□□ -0.59
FOXN4-201ENST00000299162 ATP2C1P98194 919 aaPredicted RBP11.38□□□□□ -0.59
FOXN4-201ENST00000299162 UBE2SQ16763 222 aa11.38□□□□□ -0.59
FOXN4-201ENST00000299162 GRIPAP1Q4V328 841 aa11.38□□□□□ -0.59
FOXN4-201ENST00000299162 DGKHQ86XP1 1220 aa11.38□□□□□ -0.59
FOXN4-201ENST00000299162 VSTM4Q8IW00 320 aa11.38□□□□□ -0.59
FOXN4-201ENST00000299162 FERMT2Q96AC1 680 aa11.38□□□□□ -0.59
FOXN4-201ENST00000299162 CARD6Q9BX69 1037 aa11.38□□□□□ -0.59
FOXN4-201ENST00000299162 OSBPL5Q9H0X9 879 aaPredicted RBP11.38□□□□□ -0.59
FOXN4-201ENST00000299162 DACH1Q9UI36 760 aa11.38□□□□□ -0.59
FOXN4-201ENST00000299162 PCDHA6Q9UN73 950 aa11.38□□□□□ -0.59
FOXN4-201ENST00000299162 PCDHA8Q9Y5H6 950 aa11.38□□□□□ -0.59
FOXN4-201ENST00000299162 A0A0U1RQJ8 604 aa11.37□□□□□ -0.59
FOXN4-201ENST00000299162 N4BP3O15049 544 aa11.37□□□□□ -0.59
FOXN4-201ENST00000299162 PHACTR2O75167 634 aa11.37□□□□□ -0.59
FOXN4-201ENST00000299162 CALML3P27482 149 aa11.37□□□□□ -0.59
FOXN4-201ENST00000299162 KANK3Q6NY19 840 aa11.37□□□□□ -0.59
FOXN4-201ENST00000299162 TOGARAM2Q6ZUX3 1019 aa11.37□□□□□ -0.59
FOXN4-201ENST00000299162 ZFPM1Q8IX07 1006 aa11.37□□□□□ -0.59
FOXN4-201ENST00000299162 CERS5Q8N5B7 392 aa11.37□□□□□ -0.59
FOXN4-201ENST00000299162 ATRIPQ8WXE1 791 aa11.37□□□□□ -0.59
FOXN4-201ENST00000299162 TNFRSF25Q93038 417 aa11.37□□□□□ -0.59
FOXN4-201ENST00000299162 MTRQ99707 1265 aa11.37□□□□□ -0.59
FOXN4-201ENST00000299162 MKRN1Q9UHC7 482 aaKnown RBP11.37□□□□□ -0.59
FOXN4-201ENST00000299162 DUOX1Q9NRD9 1551 aa11.37□□□□□ -0.59
FOXN4-201ENST00000299162 POLRMTO00411 1230 aaKnown RBP11.37□□□□□ -0.59
FOXN4-201ENST00000299162 FGRP09769 529 aa11.37□□□□□ -0.59
FOXN4-201ENST00000299162 BAG1Q99933 345 aaPredicted RBP11.37□□□□□ -0.59
FOXN4-201ENST00000299162 SOWAHDA6NJG2 315 aa11.37□□□□□ -0.59
FOXN4-201ENST00000299162 BTAF1O14981 1849 aa11.37□□□□□ -0.59
FOXN4-201ENST00000299162 PCP11498 1178 aaKnown RBP11.37□□□□□ -0.59
FOXN4-201ENST00000299162 CHRNA5P30532 468 aa11.37□□□□□ -0.59
FOXN4-201ENST00000299162 PPFIBP1Q86W92 1011 aa11.37□□□□□ -0.59
FOXN4-201ENST00000299162 COL23A1Q86Y22 540 aaPredicted RBP11.37□□□□□ -0.59
FOXN4-201ENST00000299162 IGSF22Q8N9C0 903 aa11.37□□□□□ -0.59
FOXN4-201ENST00000299162 RRP36Q96EU6 259 aaKnown RBP11.37□□□□□ -0.59
FOXN4-201ENST00000299162 MTA3Q9BTC8 594 aa11.37□□□□□ -0.59
FOXN4-201ENST00000299162 ARGLU1Q9NWB6 273 aaPredicted RBP11.37□□□□□ -0.59
FOXN4-201ENST00000299162 IMPACTQ9P2X3 320 aa11.37□□□□□ -0.59
FOXN4-201ENST00000299162 BBOX1O75936 387 aa11.36□□□□□ -0.59
FOXN4-201ENST00000299162 RHBDL3P58872 404 aa11.36□□□□□ -0.59
FOXN4-201ENST00000299162 GNG11P61952 73 aa11.36□□□□□ -0.59
FOXN4-201ENST00000299162 GRM4Q14833 912 aa11.36□□□□□ -0.59
FOXN4-201ENST00000299162 DNAJC21Q5F1R6 531 aaKnown RBP11.36□□□□□ -0.59
FOXN4-201ENST00000299162 SPECC1LQ69YQ0 1117 aa11.36□□□□□ -0.59
FOXN4-201ENST00000299162 DYMQ7RTS9 669 aa11.36□□□□□ -0.59
FOXN4-201ENST00000299162 ZNF579Q8NAF0 562 aaKnown RBP11.36□□□□□ -0.59
FOXN4-201ENST00000299162 TBCKQ8TEA7 893 aa11.36□□□□□ -0.59
FOXN4-201ENST00000299162 PCMTD1Q96MG8 357 aaPredicted RBP11.36□□□□□ -0.59
FOXN4-201ENST00000299162 PLEKHA4Q9H4M7 779 aa11.36□□□□□ -0.59
FOXN4-201ENST00000299162 LCMT1Q9UIC8 334 aa11.36□□□□□ -0.59
FOXN4-201ENST00000299162 MYH6P13533 1939 aa11.36□□□□□ -0.59
FOXN4-201ENST00000299162 IDEP14735 1019 aa11.36□□□□□ -0.59
FOXN4-201ENST00000299162 OAS2P29728 719 aaKnown RBP11.36□□□□□ -0.59
FOXN4-201ENST00000299162 RCAN1P53805 252 aa11.36□□□□□ -0.59
FOXN4-201ENST00000299162 MCM6Q14566 821 aa11.36□□□□□ -0.59
FOXN4-201ENST00000299162 NELFBQ8WX92 580 aa11.36□□□□□ -0.59
FOXN4-201ENST00000299162 GPR75-ASB3A0A0A6YYF3 556 aa11.36□□□□□ -0.59
FOXN4-201ENST00000299162 STXBP3O00186 592 aa11.36□□□□□ -0.59
FOXN4-201ENST00000299162 RBL2Q08999 1139 aa11.36□□□□□ -0.59
FOXN4-201ENST00000299162 ZNF287Q9HBT7 754 aa11.36□□□□□ -0.59
FOXN4-201ENST00000299162 FAM237AA0A1B0GTK4 181 aa11.35□□□□□ -0.59
FOXN4-201ENST00000299162 GDF11O95390 407 aa11.35□□□□□ -0.59
FOXN4-201ENST00000299162 SARSP49591 514 aaKnown RBP11.35□□□□□ -0.59
FOXN4-201ENST00000299162 POTEDQ86YR6 584 aa11.35□□□□□ -0.59
FOXN4-201ENST00000299162 ENOX1Q8TC92 643 aaKnown RBP11.35□□□□□ -0.59
FOXN4-201ENST00000299162 MYCBPQ99417 103 aaPredicted RBP11.35□□□□□ -0.59
FOXN4-201ENST00000299162 NUP88Q99567 741 aaPredicted RBP11.35□□□□□ -0.59
FOXN4-201ENST00000299162 DOCK2Q92608 1830 aa11.35□□□□□ -0.59
FOXN4-201ENST00000299162 TNRC6CQ9HCJ0 1690 aaKnown RBP11.35□□□□□ -0.59
FOXN4-201ENST00000299162 SPATA31A6Q5VVP1 1343 aa11.35□□□□□ -0.59
FOXN4-201ENST00000299162 IRS2Q9Y4H2 1338 aa11.35□□□□□ -0.59
FOXN4-201ENST00000299162 RPN1P04843 607 aaKnown RBP11.35□□□□□ -0.59
FOXN4-201ENST00000299162 CASP14P31944 242 aa11.35□□□□□ -0.59
FOXN4-201ENST00000299162 PRCPP42785 496 aa11.35□□□□□ -0.59
FOXN4-201ENST00000299162 GNAQP50148 359 aa11.35□□□□□ -0.59
FOXN4-201ENST00000299162 ASIC1P78348 528 aa11.35□□□□□ -0.59
FOXN4-201ENST00000299162 CCDC148Q8NFR7 591 aa11.35□□□□□ -0.59
FOXN4-201ENST00000299162 TSPYL1Q9H0U9 437 aa11.35□□□□□ -0.59
FOXN4-201ENST00000299162 POLD4Q9HCU8 107 aa11.35□□□□□ -0.59
FOXN4-201ENST00000299162 BARHL2Q9NY43 387 aa11.35□□□□□ -0.59
FOXN4-201ENST00000299162 WNK3Q9BYP7 1800 aa11.35□□□□□ -0.59
FOXN4-201ENST00000299162 POTEMA6NI47 508 aa11.34□□□□□ -0.59
FOXN4-201ENST00000299162 TDP2O95551 362 aa11.34□□□□□ -0.59
FOXN4-201ENST00000299162 CYP2C19P33261 490 aa11.34□□□□□ -0.59
FOXN4-201ENST00000299162 ZSCAN26Q16670 478 aa11.34□□□□□ -0.59
FOXN4-201ENST00000299162 SPICE1Q8N0Z3 855 aa11.34□□□□□ -0.59
FOXN4-201ENST00000299162 TRIM47Q96LD4 638 aa11.34□□□□□ -0.59
FOXN4-201ENST00000299162 ZHX3Q9H4I2 956 aa11.34□□□□□ -0.59
FOXN4-201ENST00000299162 PPP1R3GB7ZBB8 358 aa11.34□□□□□ -0.59
FOXN4-201ENST00000299162 BMP15O95972 392 aa11.34□□□□□ -0.59
FOXN4-201ENST00000299162 PLCG1P19174 1290 aa11.34□□□□□ -0.59
FOXN4-201ENST00000299162 PLA2G4AP47712 749 aa11.34□□□□□ -0.59
FOXN4-201ENST00000299162 GPS2Q13227 327 aa11.34□□□□□ -0.59
FOXN4-201ENST00000299162 FILIP1LQ4L180 1135 aa11.34□□□□□ -0.59
FOXN4-201ENST00000299162 NYAP1Q6ZVC0 841 aa11.34□□□□□ -0.59
FOXN4-201ENST00000299162 C16orf86Q6ZW13 317 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms