RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 RNF146Q9NTX7 359 aa7.62□□□□□ -1.19
CD44-204ENST00000279452 SLC5A4Q9NY91 659 aa7.62□□□□□ -1.19
CD44-204ENST00000279452 ZNF214Q9UL59 606 aaPredicted RBP7.62□□□□□ -1.19
CD44-204ENST00000279452 KLRF2D3W0D1 207 aa7.61□□□□□ -1.19
CD44-204ENST00000279452 DDAH1O94760 285 aa7.61□□□□□ -1.19
CD44-204ENST00000279452 HMGCRP04035 888 aa7.61□□□□□ -1.19
CD44-204ENST00000279452 INHAP05111 366 aa7.61□□□□□ -1.19
CD44-204ENST00000279452 ICAM1P05362 532 aa7.61□□□□□ -1.19
CD44-204ENST00000279452 PGK2P07205 417 aa7.61□□□□□ -1.19
CD44-204ENST00000279452 SNHG28P0DPA3 235 aa7.61□□□□□ -1.19
CD44-204ENST00000279452 FDX1P10109 184 aa7.61□□□□□ -1.19
CD44-204ENST00000279452 KIF5BP33176 963 aa7.61□□□□□ -1.19
CD44-204ENST00000279452 OAZ1P54368 228 aa7.61□□□□□ -1.19
CD44-204ENST00000279452 MAP2K5Q13163 448 aa7.61□□□□□ -1.19
CD44-204ENST00000279452 COL9A3Q14050 684 aaPredicted RBP7.61□□□□□ -1.19
CD44-204ENST00000279452 GRB14Q14449 540 aa7.61□□□□□ -1.19
CD44-204ENST00000279452 CCL14Q16627 93 aa7.61□□□□□ -1.19
CD44-204ENST00000279452 NSMFQ6X4W1 530 aa7.61□□□□□ -1.19
CD44-204ENST00000279452 DHX32Q7L7V1 743 aaKnown RBP7.61□□□□□ -1.19
CD44-204ENST00000279452 TMTC2Q8N394 836 aa7.61□□□□□ -1.19
CD44-204ENST00000279452 STAG2Q8N3U4 1231 aa7.61□□□□□ -1.19
CD44-204ENST00000279452 REPS2Q8NFH8 660 aa7.61□□□□□ -1.19
CD44-204ENST00000279452 ANKS1AQ92625 1134 aa7.61□□□□□ -1.19
CD44-204ENST00000279452 TRERF1Q96PN7 1200 aa7.61□□□□□ -1.19
CD44-204ENST00000279452 USP26Q9BXU7 913 aa7.61□□□□□ -1.19
CD44-204ENST00000279452 RANBP17Q9H2T7 1088 aaKnown RBP7.61□□□□□ -1.19
CD44-204ENST00000279452 ACAD9Q9H845 621 aa7.61□□□□□ -1.19
CD44-204ENST00000279452 FBXO40Q9UH90 709 aa7.61□□□□□ -1.19
CD44-204ENST00000279452 ADAMTS5Q9UNA0 930 aa7.61□□□□□ -1.19
CD44-204ENST00000279452 RIPK3Q9Y572 518 aa7.61□□□□□ -1.19
CD44-204ENST00000279452 KLF18A0A0U1RQI7 1052 aa7.6□□□□□ -1.19
CD44-204ENST00000279452 PTPDC1A2A3K4 754 aa7.6□□□□□ -1.19
CD44-204ENST00000279452 GOLGA8AA7E2F4 631 aa7.6□□□□□ -1.19
CD44-204ENST00000279452 GOLGA8BA8MQT2 603 aa7.6□□□□□ -1.19
CD44-204ENST00000279452 ATP2A1O14983 1001 aa7.6□□□□□ -1.19
CD44-204ENST00000279452 STRNO43815 780 aa7.6□□□□□ -1.19
CD44-204ENST00000279452 PLA2G6O60733 806 aa7.6□□□□□ -1.19
CD44-204ENST00000279452 ABCB7O75027 752 aa7.6□□□□□ -1.19
CD44-204ENST00000279452 CALM1P0DP23 149 aa7.6□□□□□ -1.19
CD44-204ENST00000279452 CALM2P0DP24 149 aa7.6□□□□□ -1.19
CD44-204ENST00000279452 CALM3P0DP25 149 aa7.6□□□□□ -1.19
CD44-204ENST00000279452 CNGA1P29973 690 aa7.6□□□□□ -1.19
CD44-204ENST00000279452 IRF5Q13568 498 aa7.6□□□□□ -1.19
CD44-204ENST00000279452 GRM4Q14833 912 aa7.6□□□□□ -1.19
CD44-204ENST00000279452 MORN1Q5T089 497 aa7.6□□□□□ -1.19
CD44-204ENST00000279452 MFSD14CQ5VZR4 134 aa7.6□□□□□ -1.19
CD44-204ENST00000279452 BTNL9Q6UXG8 535 aa7.6□□□□□ -1.19
CD44-204ENST00000279452 Q6ZUG5 572 aa7.6□□□□□ -1.19
CD44-204ENST00000279452 ADGRF4Q8IZF3 695 aa7.6□□□□□ -1.19
CD44-204ENST00000279452 CHST13Q8NET6 341 aa7.6□□□□□ -1.19
CD44-204ENST00000279452 IGDCC4Q8TDY8 1250 aa7.6□□□□□ -1.19
CD44-204ENST00000279452 TRIB2Q92519 343 aa7.6□□□□□ -1.19
CD44-204ENST00000279452 BRF1Q92994 677 aa7.6□□□□□ -1.19
CD44-204ENST00000279452 ZNF333Q96JL9 665 aa7.6□□□□□ -1.19
CD44-204ENST00000279452 MTA3Q9BTC8 594 aa7.6□□□□□ -1.19
CD44-204ENST00000279452 UPF3BQ9BZI7 483 aaKnown RBP7.6□□□□□ -1.19
CD44-204ENST00000279452 RNF208Q9H0X6 261 aa7.6□□□□□ -1.19
CD44-204ENST00000279452 UPF2Q9HAU5 1272 aaKnown RBP7.6□□□□□ -1.19
CD44-204ENST00000279452 SEC63Q9UGP8 760 aaKnown RBP7.6□□□□□ -1.19
CD44-204ENST00000279452 MAD2L2Q9UI95 211 aa7.6□□□□□ -1.19
CD44-204ENST00000279452 GJD2Q9UKL4 321 aa7.6□□□□□ -1.19
CD44-204ENST00000279452 CYP46A1Q9Y6A2 500 aa7.6□□□□□ -1.19
CD44-204ENST00000279452 ZNF536O15090 1300 aa7.59□□□□□ -1.19
CD44-204ENST00000279452 WDR19Q8NEZ3 1342 aa7.59□□□□□ -1.19
CD44-204ENST00000279452 POTEB2H3BUK9 544 aa7.59□□□□□ -1.19
CD44-204ENST00000279452 ZBTB43O43298 467 aa7.59□□□□□ -1.19
CD44-204ENST00000279452 EPB41L2O43491 1005 aaKnown RBP7.59□□□□□ -1.19
CD44-204ENST00000279452 CCL5P13501 91 aa7.59□□□□□ -1.19
CD44-204ENST00000279452 PRKAR2AP13861 404 aaKnown RBP7.59□□□□□ -1.19
CD44-204ENST00000279452 RPS6KB1P23443 525 aa7.59□□□□□ -1.19
CD44-204ENST00000279452 CALML3P27482 149 aa7.59□□□□□ -1.19
CD44-204ENST00000279452 LIFRP42702 1097 aa7.59□□□□□ -1.19
CD44-204ENST00000279452 APOBRQ0VD83 1088 aa7.59□□□□□ -1.19
CD44-204ENST00000279452 TROAPQ12815 778 aa7.59□□□□□ -1.19
CD44-204ENST00000279452 TRIM32Q13049 653 aa7.59□□□□□ -1.19
CD44-204ENST00000279452 MTFR1Q15390 333 aa7.59□□□□□ -1.19
CD44-204ENST00000279452 QRICH1Q2TAL8 776 aa7.59□□□□□ -1.19
CD44-204ENST00000279452 TKFCQ3LXA3 575 aa7.59□□□□□ -1.19
CD44-204ENST00000279452 TSGA10IPQ3SY00 556 aa7.59□□□□□ -1.19
CD44-204ENST00000279452 MUM1L1Q5H9M0 696 aa7.59□□□□□ -1.19
CD44-204ENST00000279452 NOL8Q76FK4 1167 aaKnown RBP7.59□□□□□ -1.19
CD44-204ENST00000279452 FBXO11Q86XK2 927 aa7.59□□□□□ -1.19
CD44-204ENST00000279452 TRMT44Q8IYL2 757 aaKnown RBP7.59□□□□□ -1.19
CD44-204ENST00000279452 ABRAQ8N0Z2 381 aa7.59□□□□□ -1.19
CD44-204ENST00000279452 CMTR1Q8N1G2 835 aaKnown RBP7.59□□□□□ -1.19
CD44-204ENST00000279452 CCDC82Q8N4S0 544 aa7.59□□□□□ -1.19
CD44-204ENST00000279452 NPLOC4Q8TAT6 608 aa7.59□□□□□ -1.19
CD44-204ENST00000279452 PXYLP1Q8TE99 480 aa7.59□□□□□ -1.19
CD44-204ENST00000279452 ARMC5Q96C12 935 aa7.59□□□□□ -1.19
CD44-204ENST00000279452 PIGSQ96S52 555 aa7.59□□□□□ -1.19
CD44-204ENST00000279452 PNMA2Q9UL42 364 aa7.59□□□□□ -1.19
CD44-204ENST00000279452 PFASO15067 1338 aa7.58□□□□□ -1.2
CD44-204ENST00000279452 ABCB11O95342 1321 aa7.58□□□□□ -1.2
CD44-204ENST00000279452 MGAMO43451 1857 aa7.58□□□□□ -1.2
CD44-204ENST00000279452 PALM3A6NDB9 673 aaPredicted RBP7.58□□□□□ -1.2
CD44-204ENST00000279452 NFIBO00712 420 aa7.58□□□□□ -1.2
CD44-204ENST00000279452 ZBTB5O15062 677 aa7.58□□□□□ -1.2
CD44-204ENST00000279452 COBLO75128 1261 aa7.58□□□□□ -1.2
CD44-204ENST00000279452 PLEKHA8P1O95397 391 aa7.58□□□□□ -1.2
CD44-204ENST00000279452 SEC24BO95487 1268 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms