RNA–Protein interactions for RNA: ENST00000269033.7

SSH2-201, Transcript of slingshot protein phosphatase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH2, Length 9,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-201ENST00000269033 GIPC2Q8TF65 315 aa6.54□□□□□ -1.36
SSH2-201ENST00000269033 RNF139Q8WU17 664 aa6.54□□□□□ -1.36
SSH2-201ENST00000269033 ZFP91Q96JP5 570 aaPredicted RBP6.54□□□□□ -1.36
SSH2-201ENST00000269033 USP21Q9UK80 565 aa6.54□□□□□ -1.36
SSH2-201ENST00000269033 SETD1BQ9UPS6 1966 aaKnown RBP6.54□□□□□ -1.36
SSH2-201ENST00000269033 HSPA6P17066 643 aa6.54□□□□□ -1.36
SSH2-201ENST00000269033 PKD2L1Q9P0L9 805 aa6.54□□□□□ -1.36
SSH2-201ENST00000269033 CDV3Q9UKY7 258 aaKnown RBP6.54□□□□□ -1.36
SSH2-201ENST00000269033 ARHGAP42A6NI28 874 aa6.54□□□□□ -1.36
SSH2-201ENST00000269033 APBA3O96018 575 aa6.54□□□□□ -1.36
SSH2-201ENST00000269033 FBXW4P57775 412 aa6.54□□□□□ -1.36
SSH2-201ENST00000269033 TTC31Q49AM3 519 aaPredicted RBP6.54□□□□□ -1.36
SSH2-201ENST00000269033 MIGA1Q8NAN2 632 aa6.54□□□□□ -1.36
SSH2-201ENST00000269033 GANCQ8TET4 914 aa6.54□□□□□ -1.36
SSH2-201ENST00000269033 TMX3Q96JJ7 454 aa6.54□□□□□ -1.36
SSH2-201ENST00000269033 DDX50Q9BQ39 737 aaKnown RBP6.54□□□□□ -1.36
SSH2-201ENST00000269033 MAGEB5Q9BZ81 275 aa6.54□□□□□ -1.36
SSH2-201ENST00000269033 BTG4Q9NY30 223 aa6.54□□□□□ -1.36
SSH2-201ENST00000269033 PCDHB8Q9UN66 801 aa6.54□□□□□ -1.36
SSH2-201ENST00000269033 CLGNO14967 610 aa6.54□□□□□ -1.36
SSH2-201ENST00000269033 KDM1AO60341 852 aa6.54□□□□□ -1.36
SSH2-201ENST00000269033 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.54□□□□□ -1.36
SSH2-201ENST00000269033 RNF168Q8IYW5 571 aaPredicted RBP6.54□□□□□ -1.36
SSH2-201ENST00000269033 ATP6V1E2Q96A05 226 aa6.54□□□□□ -1.36
SSH2-201ENST00000269033 SCYL1Q96KG9 808 aa6.54□□□□□ -1.36
SSH2-201ENST00000269033 ZBED2Q9BTP6 218 aa6.54□□□□□ -1.36
SSH2-201ENST00000269033 TRPC5Q9UL62 973 aaPredicted RBP6.54□□□□□ -1.36
SSH2-201ENST00000269033 SMIM23A6NLE4 172 aa6.54□□□□□ -1.36
SSH2-201ENST00000269033 LUC7L3O95232 432 aaKnown RBP6.54□□□□□ -1.36
SSH2-201ENST00000269033 ITGA6P23229 1130 aa6.54□□□□□ -1.36
SSH2-201ENST00000269033 GTF2A1P52655 376 aaPredicted RBP6.54□□□□□ -1.36
SSH2-201ENST00000269033 GRIN1Q05586 938 aa6.54□□□□□ -1.36
SSH2-201ENST00000269033 PPP2R5CQ13362 524 aa6.54□□□□□ -1.36
SSH2-201ENST00000269033 PAWRQ96IZ0 340 aaKnown RBP6.54□□□□□ -1.36
SSH2-201ENST00000269033 VPS39Q96JC1 886 aa6.54□□□□□ -1.36
SSH2-201ENST00000269033 TUBB6Q9BUF5 446 aa6.54□□□□□ -1.36
SSH2-201ENST00000269033 METTL22Q9BUU2 404 aaPredicted RBP6.54□□□□□ -1.36
SSH2-201ENST00000269033 GPBP1L1Q9HC44 474 aaPredicted RBP6.54□□□□□ -1.36
SSH2-201ENST00000269033 KCNH3Q9ULD8 1083 aa6.54□□□□□ -1.36
SSH2-201ENST00000269033 CTNND2Q9UQB3 1225 aa6.54□□□□□ -1.36
SSH2-201ENST00000269033 SMCO2A6NFE2 343 aa6.54□□□□□ -1.36
SSH2-201ENST00000269033 SDSP20132 328 aa6.54□□□□□ -1.36
SSH2-201ENST00000269033 PTK2Q05397 1052 aa6.54□□□□□ -1.36
SSH2-201ENST00000269033 MFSD14BQ5SR56 506 aa6.54□□□□□ -1.36
SSH2-201ENST00000269033 NME8Q8N427 588 aa6.54□□□□□ -1.36
SSH2-201ENST00000269033 RYBPQ8N488 228 aaPredicted RBP6.54□□□□□ -1.36
SSH2-201ENST00000269033 SNX21Q969T3 373 aa6.54□□□□□ -1.36
SSH2-201ENST00000269033 MTBPQ96DY7 904 aa6.54□□□□□ -1.36
SSH2-201ENST00000269033 ZSWIM4Q9H7M6 989 aa6.54□□□□□ -1.36
SSH2-201ENST00000269033 SUCLA2Q9P2R7 463 aaPredicted RBP6.54□□□□□ -1.36
SSH2-201ENST00000269033 DPYSL4O14531 572 aa6.53□□□□□ -1.36
SSH2-201ENST00000269033 NSFP46459 744 aaKnown RBP6.53□□□□□ -1.36
SSH2-201ENST00000269033 CDC37Q16543 378 aaPredicted RBP6.53□□□□□ -1.36
SSH2-201ENST00000269033 TTC23LQ6PF05 361 aa6.53□□□□□ -1.36
SSH2-201ENST00000269033 FAM196AQ6ZSG2 479 aa6.53□□□□□ -1.36
SSH2-201ENST00000269033 TSC1Q92574 1164 aa6.53□□□□□ -1.36
SSH2-201ENST00000269033 THUMPD2Q9BTF0 503 aaKnown RBP6.53□□□□□ -1.36
SSH2-201ENST00000269033 CDK13Q14004 1512 aaKnown RBP6.53□□□□□ -1.36
SSH2-201ENST00000269033 ARHGAP27Q6ZUM4 889 aa6.53□□□□□ -1.36
SSH2-201ENST00000269033 CCDC186Q7Z3E2 898 aa6.53□□□□□ -1.36
SSH2-201ENST00000269033 CTAGE3PQ8IX95 158 aa6.53□□□□□ -1.36
SSH2-201ENST00000269033 FAM178BQ8IXR5 827 aa6.53□□□□□ -1.36
SSH2-201ENST00000269033 MMTAG2Q9BU76 263 aaKnown RBP6.53□□□□□ -1.36
SSH2-201ENST00000269033 IFIH1Q9BYX4 1025 aaKnown RBP6.53□□□□□ -1.36
SSH2-201ENST00000269033 SUDS3Q9H7L9 328 aaPredicted RBP6.53□□□□□ -1.36
SSH2-201ENST00000269033 MRPL40Q9NQ50 206 aaKnown RBP6.53□□□□□ -1.36
SSH2-201ENST00000269033 PASKQ96RG2 1323 aa6.53□□□□□ -1.36
SSH2-201ENST00000269033 OCM2P0CE71 109 aa6.53□□□□□ -1.36
SSH2-201ENST00000269033 OCMP0CE72 109 aaPredicted RBP6.53□□□□□ -1.36
SSH2-201ENST00000269033 GCFC2P16383 781 aaKnown RBP6.53□□□□□ -1.36
SSH2-201ENST00000269033 ARL4AP40617 200 aa6.53□□□□□ -1.36
SSH2-201ENST00000269033 APBA1Q02410 837 aa6.53□□□□□ -1.36
SSH2-201ENST00000269033 ACBD5Q5T8D3 534 aaPredicted RBP6.53□□□□□ -1.36
SSH2-201ENST00000269033 CREB3L3Q68CJ9 461 aa6.53□□□□□ -1.36
SSH2-201ENST00000269033 HOMEZQ8IX15 550 aa6.53□□□□□ -1.36
SSH2-201ENST00000269033 KIRREL3Q8IZU9 778 aa6.53□□□□□ -1.36
SSH2-201ENST00000269033 THEM5Q8N1Q8 247 aa6.53□□□□□ -1.36
SSH2-201ENST00000269033 PAGR1Q9BTK6 254 aa6.53□□□□□ -1.36
SSH2-201ENST00000269033 HPCAL4Q9UM19 191 aa6.53□□□□□ -1.36
SSH2-201ENST00000269033 TESPA1A2RU30 521 aaPredicted RBP6.53□□□□□ -1.36
SSH2-201ENST00000269033 STK25O00506 426 aa6.53□□□□□ -1.36
SSH2-201ENST00000269033 RGS16O15492 202 aaPredicted RBP6.53□□□□□ -1.36
SSH2-201ENST00000269033 ESRRGP62508 458 aa6.53□□□□□ -1.36
SSH2-201ENST00000269033 URGCPQ8TCY9 931 aa6.53□□□□□ -1.36
SSH2-201ENST00000269033 RABGGTAQ92696 567 aa6.53□□□□□ -1.36
SSH2-201ENST00000269033 WDR11Q9BZH6 1224 aa6.53□□□□□ -1.36
SSH2-201ENST00000269033 EHD2Q9NZN4 543 aa6.53□□□□□ -1.36
SSH2-201ENST00000269033 KRT87PA6NCN2 255 aa6.53□□□□□ -1.36
SSH2-201ENST00000269033 PMLP29590 882 aa6.53□□□□□ -1.36
SSH2-201ENST00000269033 KRT39Q6A163 491 aa6.53□□□□□ -1.36
SSH2-201ENST00000269033 PDCD7Q8N8D1 485 aaKnown RBP6.53□□□□□ -1.36
SSH2-201ENST00000269033 PDZD8Q8NEN9 1154 aa6.53□□□□□ -1.36
SSH2-201ENST00000269033 NUDCD1Q96RS6 583 aa6.53□□□□□ -1.36
SSH2-201ENST00000269033 ARMCX3Q9UH62 379 aaPredicted RBP6.53□□□□□ -1.36
SSH2-201ENST00000269033 SBNO1A3KN83 1393 aa6.53□□□□□ -1.36
SSH2-201ENST00000269033 STX2P32856 288 aa6.53□□□□□ -1.36
SSH2-201ENST00000269033 RAD51Q06609 339 aa6.53□□□□□ -1.36
SSH2-201ENST00000269033 STX19Q8N4C7 294 aa6.53□□□□□ -1.36
SSH2-201ENST00000269033 SCG3Q8WXD2 468 aaKnown RBP6.53□□□□□ -1.36
SSH2-201ENST00000269033 DACT1Q9NYF0 836 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms