RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 TMEM67Q5HYA8 995 aa9.86□□□□□ -0.83
ERCC8-201ENST00000265038 RNF20Q5VTR2 975 aa9.86□□□□□ -0.83
ERCC8-201ENST00000265038 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.86□□□□□ -0.83
ERCC8-201ENST00000265038 STAG2Q8N3U4 1231 aa9.86□□□□□ -0.83
ERCC8-201ENST00000265038 CHST13Q8NET6 341 aa9.86□□□□□ -0.83
ERCC8-201ENST00000265038 HTTP42858 3142 aa9.86□□□□□ -0.83
ERCC8-201ENST00000265038 ICAM1P05362 532 aa9.85□□□□□ -0.83
ERCC8-201ENST00000265038 GJB1P08034 283 aa9.85□□□□□ -0.83
ERCC8-201ENST00000265038 PARP1P09874 1014 aaKnown RBP9.85□□□□□ -0.83
ERCC8-201ENST00000265038 MCM5P33992 734 aa9.85□□□□□ -0.83
ERCC8-201ENST00000265038 HSPA4P34932 840 aa9.85□□□□□ -0.83
ERCC8-201ENST00000265038 ASPRV1Q53RT3 343 aa9.85□□□□□ -0.83
ERCC8-201ENST00000265038 OLFML2BQ68BL8 750 aa9.85□□□□□ -0.83
ERCC8-201ENST00000265038 NEK1Q96PY6 1258 aa9.85□□□□□ -0.83
ERCC8-201ENST00000265038 MTA3Q9BTC8 594 aa9.85□□□□□ -0.83
ERCC8-201ENST00000265038 LY9Q9HBG7 655 aa9.85□□□□□ -0.83
ERCC8-201ENST00000265038 PAK6Q9NQU5 681 aaPredicted RBP9.85□□□□□ -0.83
ERCC8-201ENST00000265038 MAD2L2Q9UI95 211 aa9.85□□□□□ -0.83
ERCC8-201ENST00000265038 RPTORQ8N122 1335 aa9.85□□□□□ -0.83
ERCC8-201ENST00000265038 DNAJC25-GNG10A0A024R161 153 aa9.85□□□□□ -0.83
ERCC8-201ENST00000265038 SH2B2O14492 632 aaPredicted RBP9.85□□□□□ -0.83
ERCC8-201ENST00000265038 REC8O95072 547 aa9.85□□□□□ -0.83
ERCC8-201ENST00000265038 PRKAR2AP13861 404 aaKnown RBP9.85□□□□□ -0.83
ERCC8-201ENST00000265038 CYP2C19P33261 490 aa9.85□□□□□ -0.83
ERCC8-201ENST00000265038 GJA8P48165 433 aa9.85□□□□□ -0.83
ERCC8-201ENST00000265038 EXOSC10Q01780 885 aaKnown RBP9.85□□□□□ -0.83
ERCC8-201ENST00000265038 TROAPQ12815 778 aa9.85□□□□□ -0.83
ERCC8-201ENST00000265038 SART3Q15020 963 aaKnown RBP9.85□□□□□ -0.83
ERCC8-201ENST00000265038 TKFCQ3LXA3 575 aa9.85□□□□□ -0.83
ERCC8-201ENST00000265038 MUM1L1Q5H9M0 696 aa9.85□□□□□ -0.83
ERCC8-201ENST00000265038 ADGRF4Q8IZF3 695 aa9.85□□□□□ -0.83
ERCC8-201ENST00000265038 SHISA4Q96DD7 197 aa9.85□□□□□ -0.83
ERCC8-201ENST00000265038 MAML3Q96JK9 1138 aa9.85□□□□□ -0.83
ERCC8-201ENST00000265038 TRERF1Q96PN7 1200 aa9.85□□□□□ -0.83
ERCC8-201ENST00000265038 HOMER2Q9NSB8 354 aa9.85□□□□□ -0.83
ERCC8-201ENST00000265038 RNF146Q9NTX7 359 aa9.85□□□□□ -0.83
ERCC8-201ENST00000265038 FBXO40Q9UH90 709 aa9.85□□□□□ -0.83
ERCC8-201ENST00000265038 CCPG1Q9ULG6 757 aa9.85□□□□□ -0.83
ERCC8-201ENST00000265038 LAMA4Q16363 1823 aa9.84□□□□□ -0.83
ERCC8-201ENST00000265038 PALM3A6NDB9 673 aaPredicted RBP9.84□□□□□ -0.83
ERCC8-201ENST00000265038 ALAS1P13196 640 aa9.84□□□□□ -0.83
ERCC8-201ENST00000265038 CCND3P30281 292 aaPredicted RBP9.84□□□□□ -0.83
ERCC8-201ENST00000265038 GRM4Q14833 912 aa9.84□□□□□ -0.83
ERCC8-201ENST00000265038 SLC35G1Q2M3R5 365 aa9.84□□□□□ -0.83
ERCC8-201ENST00000265038 MFSD14CQ5VZR4 134 aa9.84□□□□□ -0.83
ERCC8-201ENST00000265038 U2AF1L4Q8WU68 220 aaKnown RBP9.84□□□□□ -0.83
ERCC8-201ENST00000265038 DDX11Q96FC9 970 aa9.84□□□□□ -0.83
ERCC8-201ENST00000265038 TMEM87BQ96K49 555 aa9.84□□□□□ -0.83
ERCC8-201ENST00000265038 USP26Q9BXU7 913 aa9.84□□□□□ -0.83
ERCC8-201ENST00000265038 LRRC2Q9BYS8 371 aa9.84□□□□□ -0.83
ERCC8-201ENST00000265038 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.84□□□□□ -0.83
ERCC8-201ENST00000265038 ACAD9Q9H845 621 aa9.84□□□□□ -0.83
ERCC8-201ENST00000265038 JMJD4Q9H9V9 463 aa9.84□□□□□ -0.83
ERCC8-201ENST00000265038 HMX1Q9NP08 348 aaPredicted RBP9.84□□□□□ -0.83
ERCC8-201ENST00000265038 SLC5A4Q9NY91 659 aa9.84□□□□□ -0.83
ERCC8-201ENST00000265038 DIS3Q9Y2L1 958 aaKnown RBP9.84□□□□□ -0.83
ERCC8-201ENST00000265038 SNX14Q9Y5W7 946 aa9.84□□□□□ -0.83
ERCC8-201ENST00000265038 KLRF2D3W0D1 207 aa9.83□□□□□ -0.84
ERCC8-201ENST00000265038 EPB41L2O43491 1005 aaKnown RBP9.83□□□□□ -0.84
ERCC8-201ENST00000265038 SGPL1O95470 568 aa9.83□□□□□ -0.84
ERCC8-201ENST00000265038 LIFRP42702 1097 aa9.83□□□□□ -0.84
ERCC8-201ENST00000265038 DHX32Q7L7V1 743 aaKnown RBP9.83□□□□□ -0.84
ERCC8-201ENST00000265038 ANKRD35Q8N283 1001 aa9.83□□□□□ -0.84
ERCC8-201ENST00000265038 TMTC2Q8N394 836 aa9.83□□□□□ -0.84
ERCC8-201ENST00000265038 TRPV1Q8NER1 839 aa9.83□□□□□ -0.84
ERCC8-201ENST00000265038 FGD4Q96M96 766 aa9.83□□□□□ -0.84
ERCC8-201ENST00000265038 DEFB118Q96PH6 123 aa9.83□□□□□ -0.84
ERCC8-201ENST00000265038 VAT1LQ9HCJ6 419 aa9.83□□□□□ -0.84
ERCC8-201ENST00000265038 A1CFQ9NQ94 594 aaKnown RBP9.83□□□□□ -0.84
ERCC8-201ENST00000265038 PLXNB2O15031 1838 aa9.83□□□□□ -0.84
ERCC8-201ENST00000265038 MGAMO43451 1857 aa9.83□□□□□ -0.84
ERCC8-201ENST00000265038 KRT32Q14532 448 aa9.83□□□□□ -0.84
ERCC8-201ENST00000265038 CDC37Q16543 378 aaPredicted RBP9.83□□□□□ -0.84
ERCC8-201ENST00000265038 PRAMEF19Q5SWL8 479 aa9.83□□□□□ -0.84
ERCC8-201ENST00000265038 CATIPQ7Z7H3 387 aa9.83□□□□□ -0.84
ERCC8-201ENST00000265038 ZNF654Q8IZM8 581 aa9.83□□□□□ -0.84
ERCC8-201ENST00000265038 CLEC4DQ8WXI8 215 aa9.83□□□□□ -0.84
ERCC8-201ENST00000265038 TCEANC2Q96MN5 208 aa9.83□□□□□ -0.84
ERCC8-201ENST00000265038 MYL10Q9BUA6 226 aa9.83□□□□□ -0.84
ERCC8-201ENST00000265038 CRISPLD2Q9H0B8 497 aa9.83□□□□□ -0.84
ERCC8-201ENST00000265038 WDR19Q8NEZ3 1342 aa9.83□□□□□ -0.84
ERCC8-201ENST00000265038 MYH4Q9Y623 1939 aa9.83□□□□□ -0.84
ERCC8-201ENST00000265038 NFIBO00712 420 aa9.82□□□□□ -0.84
ERCC8-201ENST00000265038 DDAH1O94760 285 aa9.82□□□□□ -0.84
ERCC8-201ENST00000265038 CYBAP13498 195 aa9.82□□□□□ -0.84
ERCC8-201ENST00000265038 CPA1P15085 419 aa9.82□□□□□ -0.84
ERCC8-201ENST00000265038 CNTN2Q02246 1040 aa9.82□□□□□ -0.84
ERCC8-201ENST00000265038 MLLT1Q03111 559 aaPredicted RBP9.82□□□□□ -0.84
ERCC8-201ENST00000265038 QRICH1Q2TAL8 776 aa9.82□□□□□ -0.84
ERCC8-201ENST00000265038 NUP133Q8WUM0 1156 aa9.82□□□□□ -0.84
ERCC8-201ENST00000265038 MTMR8Q96EF0 704 aa9.82□□□□□ -0.84
ERCC8-201ENST00000265038 PARP14Q460N5 1801 aa9.82□□□□□ -0.84
ERCC8-201ENST00000265038 CCDC69A6NI79 296 aa9.82□□□□□ -0.84
ERCC8-201ENST00000265038 CYTH3O43739 400 aa9.82□□□□□ -0.84
ERCC8-201ENST00000265038 LHX8Q68G74 356 aa9.82□□□□□ -0.84
ERCC8-201ENST00000265038 MAMDC4Q6UXC1 1216 aa9.82□□□□□ -0.84
ERCC8-201ENST00000265038 NFXL1Q6ZNB6 911 aa9.82□□□□□ -0.84
ERCC8-201ENST00000265038 SGMS1Q86VZ5 419 aa9.82□□□□□ -0.84
ERCC8-201ENST00000265038 FAM133AQ8N9E0 248 aa9.82□□□□□ -0.84
ERCC8-201ENST00000265038 JAKMIP1Q96N16 626 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms