RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 ECM2O94769 699 aaPredicted RBP22.11■■□□□ 1.13
CSPG5-201ENST00000264723 CFBP00751 764 aa22.11■■□□□ 1.13
CSPG5-201ENST00000264723 GRAPQ13588 217 aa22.11■■□□□ 1.13
CSPG5-201ENST00000264723 ZSCAN26Q16670 478 aa22.11■■□□□ 1.13
CSPG5-201ENST00000264723 SPICE1Q8N0Z3 855 aa22.11■■□□□ 1.13
CSPG5-201ENST00000264723 GRAPLQ8TC17 118 aaPredicted RBP22.11■■□□□ 1.13
CSPG5-201ENST00000264723 RRAGAQ7L523 313 aa22.11■■□□□ 1.13
CSPG5-201ENST00000264723 LINC00116Q8NCU8 138 aa22.11■■□□□ 1.13
CSPG5-201ENST00000264723 DCP1AQ9NPI6 582 aaPredicted RBP22.11■■□□□ 1.13
CSPG5-201ENST00000264723 GJA3Q9Y6H8 435 aa22.11■■□□□ 1.13
CSPG5-201ENST00000264723 ZEB2O60315 1214 aa22.11■■□□□ 1.13
CSPG5-201ENST00000264723 TC2NQ8N9U0 490 aa22.11■■□□□ 1.13
CSPG5-201ENST00000264723 TFRCP02786 760 aaKnown RBP22.1■■□□□ 1.13
CSPG5-201ENST00000264723 CXCR5P32302 372 aa22.1■■□□□ 1.13
CSPG5-201ENST00000264723 SSR1P43307 286 aaKnown RBP22.1■■□□□ 1.13
CSPG5-201ENST00000264723 NFIXQ14938 502 aa22.1■■□□□ 1.13
CSPG5-201ENST00000264723 MAEAQ7L5Y9 396 aa22.1■■□□□ 1.13
CSPG5-201ENST00000264723 GOLGA6L10A6NI86 522 aa22.1■■□□□ 1.13
CSPG5-201ENST00000264723 SEMA3EO15041 775 aa22.1■■□□□ 1.13
CSPG5-201ENST00000264723 DDAH1O94760 285 aa22.1■■□□□ 1.13
CSPG5-201ENST00000264723 ALDH1B1P30837 517 aa22.1■■□□□ 1.13
CSPG5-201ENST00000264723 MAATS1Q7Z4T9 603 aa22.1■■□□□ 1.13
CSPG5-201ENST00000264723 EHBP1Q8NDI1 1231 aa22.1■■□□□ 1.13
CSPG5-201ENST00000264723 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.1■■□□□ 1.13
CSPG5-201ENST00000264723 SAR1BQ9Y6B6 198 aa22.1■■□□□ 1.13
CSPG5-201ENST00000264723 SALL1Q9NSC2 1324 aa22.1■■□□□ 1.13
CSPG5-201ENST00000264723 CKAP4Q07065 602 aaKnown RBP22.1■■□□□ 1.13
CSPG5-201ENST00000264723 LRRC41Q15345 812 aa22.1■■□□□ 1.13
CSPG5-201ENST00000264723 NKX2-3Q8TAU0 364 aa22.1■■□□□ 1.13
CSPG5-201ENST00000264723 COA7Q96BR5 231 aa22.1■■□□□ 1.13
CSPG5-201ENST00000264723 LRRC27Q9C0I9 530 aa22.1■■□□□ 1.13
CSPG5-201ENST00000264723 FXR1P51114 621 aaKnown RBP eCLIP22.09■■□□□ 1.13
CSPG5-201ENST00000264723 HERC4Q5GLZ8 1057 aaPredicted RBP22.09■■□□□ 1.13
CSPG5-201ENST00000264723 KRT27Q7Z3Y8 459 aa22.09■■□□□ 1.13
CSPG5-201ENST00000264723 NAA15Q9BXJ9 866 aaKnown RBP22.09■■□□□ 1.13
CSPG5-201ENST00000264723 MON2Q7Z3U7 1717 aa22.09■■□□□ 1.13
CSPG5-201ENST00000264723 SPATA31A1Q5TZJ5 1347 aa22.09■■□□□ 1.13
CSPG5-201ENST00000264723 BICDL2A1A5D9 508 aa22.09■■□□□ 1.13
CSPG5-201ENST00000264723 PRPF3O43395 683 aaKnown RBP22.09■■□□□ 1.13
CSPG5-201ENST00000264723 STK32BQ9NY57 414 aa22.09■■□□□ 1.13
CSPG5-201ENST00000264723 HDAC6Q9UBN7 1215 aa22.09■■□□□ 1.13
CSPG5-201ENST00000264723 FAM196BA6NMK8 535 aa22.09■■□□□ 1.13
CSPG5-201ENST00000264723 TCP10L2B9ZVM9 353 aa22.09■■□□□ 1.13
CSPG5-201ENST00000264723 MFAP3LO75121 409 aa22.09■■□□□ 1.13
CSPG5-201ENST00000264723 TADA3O75528 432 aa22.09■■□□□ 1.13
CSPG5-201ENST00000264723 HNRNPH2P55795 449 aaKnown RBP22.09■■□□□ 1.13
CSPG5-201ENST00000264723 RAD9BQ6WBX8 426 aa22.09■■□□□ 1.13
CSPG5-201ENST00000264723 KCTD1Q719H9 257 aa22.09■■□□□ 1.13
CSPG5-201ENST00000264723 LRP10Q7Z4F1 713 aa22.09■■□□□ 1.13
CSPG5-201ENST00000264723 HOMER2Q9NSB8 354 aa22.09■■□□□ 1.13
CSPG5-201ENST00000264723 ADGRG1Q9Y653 693 aa22.09■■□□□ 1.13
CSPG5-201ENST00000264723 RAPGEF1Q13905 1077 aa22.08■■□□□ 1.13
CSPG5-201ENST00000264723 TUBGCP2Q9BSJ2 902 aa22.08■■□□□ 1.13
CSPG5-201ENST00000264723 ABCB6Q9NP58 842 aa22.08■■□□□ 1.13
CSPG5-201ENST00000264723 PPEF1O14829 653 aaPredicted RBP22.08■■□□□ 1.13
CSPG5-201ENST00000264723 PRKG1Q13976 671 aa22.08■■□□□ 1.13
CSPG5-201ENST00000264723 NTRK3Q16288 839 aa22.08■■□□□ 1.13
CSPG5-201ENST00000264723 CC2D1AQ6P1N0 951 aaPredicted RBP22.08■■□□□ 1.13
CSPG5-201ENST00000264723 SRBD1Q8N5C6 995 aaKnown RBP22.08■■□□□ 1.13
CSPG5-201ENST00000264723 MAP3K14Q99558 947 aa22.08■■□□□ 1.13
CSPG5-201ENST00000264723 FAN1Q9Y2M0 1017 aa22.08■■□□□ 1.13
CSPG5-201ENST00000264723 BUB1O43683 1085 aa22.08■■□□□ 1.12
CSPG5-201ENST00000264723 PRCPP42785 496 aa22.08■■□□□ 1.12
CSPG5-201ENST00000264723 NLGN1Q8N2Q7 840 aa22.08■■□□□ 1.12
CSPG5-201ENST00000264723 CHP1Q99653 195 aa22.08■■□□□ 1.12
CSPG5-201ENST00000264723 TRIM10Q9UDY6 481 aa22.08■■□□□ 1.12
CSPG5-201ENST00000264723 OVOS2A0A0G2JMS6 1433 aa22.08■■□□□ 1.12
CSPG5-201ENST00000264723 AFF2P51816 1311 aa22.07■■□□□ 1.12
CSPG5-201ENST00000264723 CLRN2A0PK11 232 aa22.07■■□□□ 1.12
CSPG5-201ENST00000264723 DDX39AO00148 427 aaKnown RBP22.07■■□□□ 1.12
CSPG5-201ENST00000264723 MMP10P09238 476 aa22.07■■□□□ 1.12
CSPG5-201ENST00000264723 DCAF17Q5H9S7 520 aaPredicted RBP22.07■■□□□ 1.12
CSPG5-201ENST00000264723 SUGCTQ9HAC7 445 aa22.07■■□□□ 1.12
CSPG5-201ENST00000264723 KLRK1P26718 216 aa22.07■■□□□ 1.12
CSPG5-201ENST00000264723 MAGEA1P43355 309 aa22.07■■□□□ 1.12
CSPG5-201ENST00000264723 CCDC174Q6PII3 467 aa22.07■■□□□ 1.12
CSPG5-201ENST00000264723 SND1Q7KZF4 910 aaKnown RBP eCLIP22.07■■□□□ 1.12
CSPG5-201ENST00000264723 VPS36Q86VN1 386 aa22.07■■□□□ 1.12
CSPG5-201ENST00000264723 REXO1L1PQ8IX06 675 aa22.07■■□□□ 1.12
CSPG5-201ENST00000264723 STAG2Q8N3U4 1231 aa22.07■■□□□ 1.12
CSPG5-201ENST00000264723 HPS3Q969F9 1004 aa22.07■■□□□ 1.12
CSPG5-201ENST00000264723 PIGSQ96S52 555 aa22.07■■□□□ 1.12
CSPG5-201ENST00000264723 NBPF3Q9H094 633 aa22.07■■□□□ 1.12
CSPG5-201ENST00000264723 MCM3P25205 808 aa22.07■■□□□ 1.12
CSPG5-201ENST00000264723 TTC19Q6DKK2 380 aaPredicted RBP22.07■■□□□ 1.12
CSPG5-201ENST00000264723 TMTC3Q6ZXV5 915 aa22.07■■□□□ 1.12
CSPG5-201ENST00000264723 EHMT1Q9H9B1 1298 aa22.07■■□□□ 1.12
CSPG5-201ENST00000264723 FAM217BQ9NTX9 383 aaPredicted RBP22.07■■□□□ 1.12
CSPG5-201ENST00000264723 BBOX1O75936 387 aa22.06■■□□□ 1.12
CSPG5-201ENST00000264723 CACNB1Q02641 598 aaPredicted RBP22.06■■□□□ 1.12
CSPG5-201ENST00000264723 EARS2Q5JPH6 523 aaKnown RBP22.06■■□□□ 1.12
CSPG5-201ENST00000264723 FER1L4A9Z1Z3 1794 aa22.06■■□□□ 1.12
CSPG5-201ENST00000264723 H7C1D1 291 aa22.06■■□□□ 1.12
CSPG5-201ENST00000264723 KIAA0754O94854 1291 aa22.06■■□□□ 1.12
CSPG5-201ENST00000264723 NTSR2O95665 410 aa22.06■■□□□ 1.12
CSPG5-201ENST00000264723 SF3A3Q12874 501 aaKnown RBP eCLIP22.06■■□□□ 1.12
CSPG5-201ENST00000264723 ALX1Q15699 326 aa22.06■■□□□ 1.12
CSPG5-201ENST00000264723 INTS5Q6P9B9 1019 aaKnown RBP22.06■■□□□ 1.12
CSPG5-201ENST00000264723 SECISBP2LQ93073 1101 aaKnown RBP22.06■■□□□ 1.12
CSPG5-201ENST00000264723 IFIH1Q9BYX4 1025 aaKnown RBP22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms