RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 VARSP26640 1264 aaKnown RBP8.56□□□□□ -1.04
GPNMB-201ENST00000258733 TNNI2P48788 182 aa8.56□□□□□ -1.04
GPNMB-201ENST00000258733 RCAN1P53805 252 aa8.56□□□□□ -1.04
GPNMB-201ENST00000258733 POLE2P56282 527 aa8.56□□□□□ -1.04
GPNMB-201ENST00000258733 NMIQ13287 307 aaPredicted RBP8.56□□□□□ -1.04
GPNMB-201ENST00000258733 ACAP1Q15027 740 aa8.56□□□□□ -1.04
GPNMB-201ENST00000258733 PCSK7Q16549 785 aa8.56□□□□□ -1.04
GPNMB-201ENST00000258733 HDXQ7Z353 690 aa8.56□□□□□ -1.04
GPNMB-201ENST00000258733 MCF2L2Q86YR7 1114 aa8.56□□□□□ -1.04
GPNMB-201ENST00000258733 GIMAP8Q8ND71 665 aaPredicted RBP8.56□□□□□ -1.04
GPNMB-201ENST00000258733 FANCFQ9NPI8 374 aa8.56□□□□□ -1.04
GPNMB-201ENST00000258733 CCPG1Q9ULG6 757 aa8.56□□□□□ -1.04
GPNMB-201ENST00000258733 NCOA1Q15788 1441 aa8.56□□□□□ -1.04
GPNMB-201ENST00000258733 CCDC151A5D8V7 595 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 RASA4O43374 803 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 SHOX2O60902 331 aaPredicted RBP8.55□□□□□ -1.04
GPNMB-201ENST00000258733 ATP5DP30049 168 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 BPIFB3P59826 476 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 GRAMD4Q6IC98 578 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 YTHDF3Q7Z739 585 aaKnown RBP8.55□□□□□ -1.04
GPNMB-201ENST00000258733 CCDC13Q8IYE1 715 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 HS6ST3Q8IZP7 471 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 NSUN7Q8NE18 718 aaKnown RBP8.55□□□□□ -1.04
GPNMB-201ENST00000258733 POLMQ9NP87 494 aaPredicted RBP8.55□□□□□ -1.04
GPNMB-201ENST00000258733 DMAP1Q9NPF5 467 aaPredicted RBP8.55□□□□□ -1.04
GPNMB-201ENST00000258733 TCEAL9Q9UHQ7 104 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 LZTS1Q9Y250 596 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 KDM5DQ9BY66 1539 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 RPRD2Q5VT52 1461 aaKnown RBP8.55□□□□□ -1.04
GPNMB-201ENST00000258733 ARPC4-TTLL3A0A0A6YYG9 625 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 GSTT2P0CG29 244 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 GSTT2BP0CG30 244 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 DDX5P17844 614 aaKnown RBP8.55□□□□□ -1.04
GPNMB-201ENST00000258733 CHKAP35790 457 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 ETFBP38117 255 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 EVCP57679 992 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 USP46P62068 366 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 GBE1Q04446 702 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 COG2Q14746 738 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 P3H1Q32P28 736 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 TBC1D9Q6ZT07 1266 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 FUKQ8N0W3 1084 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 CCDC89Q8N998 374 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 SCG3Q8WXD2 468 aaKnown RBP8.55□□□□□ -1.04
GPNMB-201ENST00000258733 RNF25Q96BH1 459 aaPredicted RBP8.55□□□□□ -1.04
GPNMB-201ENST00000258733 B3GNT4Q9C0J1 378 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 BHMT2Q9H2M3 363 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 SPATA31E1Q6ZUB1 1445 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 DISP1Q96F81 1524 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 DPPA5A6NC42 116 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 ASAP2O43150 1006 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 CYTH3O43739 400 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 SSBP05455 408 aaKnown RBP eCLIP8.55□□□□□ -1.04
GPNMB-201ENST00000258733 ANXA13P27216 316 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 SNX16P57768 344 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 TUBA3CQ13748 450 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 WDR45BQ5MNZ6 344 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 LUZP1Q86V48 1076 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 BCAS4Q8TDM0 211 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 ZNF570Q96NI8 536 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 OSBPL1AQ9BXW6 950 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 NDEL1Q9GZM8 345 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 PCDHGB3Q9Y5G1 929 aa8.55□□□□□ -1.04
GPNMB-201ENST00000258733 PHACTR2O75167 634 aa8.54□□□□□ -1.04
GPNMB-201ENST00000258733 STAMBPO95630 424 aa8.54□□□□□ -1.04
GPNMB-201ENST00000258733 CD9P21926 228 aa8.54□□□□□ -1.04
GPNMB-201ENST00000258733 CETN2P41208 172 aa8.54□□□□□ -1.04
GPNMB-201ENST00000258733 DR1Q01658 176 aa8.54□□□□□ -1.04
GPNMB-201ENST00000258733 PKP1Q13835 747 aa8.54□□□□□ -1.04
GPNMB-201ENST00000258733 NFE2L2Q16236 605 aa8.54□□□□□ -1.04
GPNMB-201ENST00000258733 WDR60Q8WVS4 1066 aa8.54□□□□□ -1.04
GPNMB-201ENST00000258733 STAMBPL1Q96FJ0 436 aa8.54□□□□□ -1.04
GPNMB-201ENST00000258733 ZNF496Q96IT1 587 aaPredicted RBP8.54□□□□□ -1.04
GPNMB-201ENST00000258733 GBP3Q9H0R5 595 aa8.54□□□□□ -1.04
GPNMB-201ENST00000258733 PCDHB2Q9Y5E7 798 aa8.54□□□□□ -1.04
GPNMB-201ENST00000258733 TACC1O75410 805 aa8.54□□□□□ -1.04
GPNMB-201ENST00000258733 MKRN4PQ13434 485 aaPredicted RBP8.54□□□□□ -1.04
GPNMB-201ENST00000258733 TNIP1Q15025 636 aa8.54□□□□□ -1.04
GPNMB-201ENST00000258733 BRD3Q15059 726 aa8.54□□□□□ -1.04
GPNMB-201ENST00000258733 TWF2Q6IBS0 349 aaKnown RBP8.54□□□□□ -1.04
GPNMB-201ENST00000258733 ARHGEF18Q6ZSZ5 1173 aa8.54□□□□□ -1.04
GPNMB-201ENST00000258733 HDGFL2Q7Z4V5 671 aaPredicted RBP8.54□□□□□ -1.04
GPNMB-201ENST00000258733 CCAR2Q8N163 923 aaKnown RBP8.54□□□□□ -1.04
GPNMB-201ENST00000258733 TMEM87AQ8NBN3 555 aa8.54□□□□□ -1.04
GPNMB-201ENST00000258733 IPCEF1Q8WWN9 437 aaPredicted RBP8.54□□□□□ -1.04
GPNMB-201ENST00000258733 CLMNQ96JQ2 1002 aa8.54□□□□□ -1.04
GPNMB-201ENST00000258733 SIL1Q9H173 461 aa8.54□□□□□ -1.04
GPNMB-201ENST00000258733 TPK1Q9H3S4 243 aa8.54□□□□□ -1.04
GPNMB-201ENST00000258733 TMA7Q9Y2S6 64 aaKnown RBP8.54□□□□□ -1.04
GPNMB-201ENST00000258733 KIF14Q15058 1648 aa8.54□□□□□ -1.04
GPNMB-201ENST00000258733 GTPBP10A4D1E9 387 aaKnown RBP8.53□□□□□ -1.04
GPNMB-201ENST00000258733 LRRC72A6NJI9 287 aa8.53□□□□□ -1.04
GPNMB-201ENST00000258733 FOXN3O00409 490 aaPredicted RBP8.53□□□□□ -1.04
GPNMB-201ENST00000258733 STAT6P42226 847 aa8.53□□□□□ -1.04
GPNMB-201ENST00000258733 EIF4G2P78344 907 aaKnown RBP eCLIP8.53□□□□□ -1.04
GPNMB-201ENST00000258733 SULT2A1Q06520 285 aa8.53□□□□□ -1.04
GPNMB-201ENST00000258733 IKQ13123 557 aaPredicted RBP8.53□□□□□ -1.04
GPNMB-201ENST00000258733 SNW1Q13573 536 aaKnown RBP8.53□□□□□ -1.04
GPNMB-201ENST00000258733 EGFLAMQ63HQ2 1017 aa8.53□□□□□ -1.04
GPNMB-201ENST00000258733 NLRP9Q7RTR0 991 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms