RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 EPHB4P54760 987 aa10.29□□□□□ -0.76
SRSF6-201ENST00000244020 EZH2Q15910 746 aaKnown RBP10.29□□□□□ -0.76
SRSF6-201ENST00000244020 LRP10Q7Z4F1 713 aa10.29□□□□□ -0.76
SRSF6-201ENST00000244020 PNMA8AQ86V59 439 aaPredicted RBP10.29□□□□□ -0.76
SRSF6-201ENST00000244020 FMNL3Q8IVF7 1028 aa10.29□□□□□ -0.76
SRSF6-201ENST00000244020 SH2D3CQ8N5H7 860 aa10.29□□□□□ -0.76
SRSF6-201ENST00000244020 CSGALNACT2Q8N6G5 542 aa10.29□□□□□ -0.76
SRSF6-201ENST00000244020 SMCR8Q8TEV9 937 aaPredicted RBP10.29□□□□□ -0.76
SRSF6-201ENST00000244020 FAM212AQ96EL1 285 aa10.29□□□□□ -0.76
SRSF6-201ENST00000244020 TACO1Q9BSH4 297 aaKnown RBP10.29□□□□□ -0.76
SRSF6-201ENST00000244020 AGPAT5Q9NUQ2 364 aa10.29□□□□□ -0.76
SRSF6-201ENST00000244020 PRKAB2O43741 272 aa10.29□□□□□ -0.76
SRSF6-201ENST00000244020 HPDP32754 393 aaPredicted RBP10.29□□□□□ -0.76
SRSF6-201ENST00000244020 KIF5BP33176 963 aa10.29□□□□□ -0.76
SRSF6-201ENST00000244020 PHKA1P46020 1223 aa10.29□□□□□ -0.76
SRSF6-201ENST00000244020 KRT28Q7Z3Y7 464 aa10.29□□□□□ -0.76
SRSF6-201ENST00000244020 HDAC7Q8WUI4 952 aa10.29□□□□□ -0.76
SRSF6-201ENST00000244020 DMGDHQ9UI17 866 aaKnown RBP10.29□□□□□ -0.76
SRSF6-201ENST00000244020 PDE2AO00408 941 aaPredicted RBP10.29□□□□□ -0.76
SRSF6-201ENST00000244020 UQCRFS1P1P0C7P4 283 aa10.29□□□□□ -0.76
SRSF6-201ENST00000244020 TYW1BQ6NUM6 668 aa10.29□□□□□ -0.76
SRSF6-201ENST00000244020 EXOC1Q9NV70 894 aa10.29□□□□□ -0.76
SRSF6-201ENST00000244020 WDR17Q8IZU2 1322 aa10.29□□□□□ -0.76
SRSF6-201ENST00000244020 ANO9A1A5B4 782 aa10.29□□□□□ -0.76
SRSF6-201ENST00000244020 LRRC10BA6NIK2 292 aa10.29□□□□□ -0.76
SRSF6-201ENST00000244020 LGALS16A8MUM7 142 aa10.29□□□□□ -0.76
SRSF6-201ENST00000244020 SHOX2O60902 331 aaPredicted RBP10.29□□□□□ -0.76
SRSF6-201ENST00000244020 UBA7P41226 1012 aa10.29□□□□□ -0.76
SRSF6-201ENST00000244020 IFIT1BQ5T764 474 aaKnown RBP10.29□□□□□ -0.76
SRSF6-201ENST00000244020 ESR2Q92731 530 aa10.29□□□□□ -0.76
SRSF6-201ENST00000244020 ARL8AQ96BM9 186 aa10.29□□□□□ -0.76
SRSF6-201ENST00000244020 NUP58Q9BVL2 599 aa10.29□□□□□ -0.76
SRSF6-201ENST00000244020 CAPN11Q9UMQ6 739 aa10.29□□□□□ -0.76
SRSF6-201ENST00000244020 KRT14P02533 472 aa10.28□□□□□ -0.76
SRSF6-201ENST00000244020 RPSAP08865 295 aaKnown RBP10.28□□□□□ -0.76
SRSF6-201ENST00000244020 GUCY2FP51841 1108 aa10.28□□□□□ -0.76
SRSF6-201ENST00000244020 IFT88Q13099 833 aa10.28□□□□□ -0.76
SRSF6-201ENST00000244020 CHRNA2Q15822 529 aa10.28□□□□□ -0.76
SRSF6-201ENST00000244020 ALS2CLQ60I27 953 aa10.28□□□□□ -0.76
SRSF6-201ENST00000244020 ANKRD13CQ8N6S4 541 aa10.28□□□□□ -0.76
SRSF6-201ENST00000244020 SPATA4Q8NEY3 305 aa10.28□□□□□ -0.76
SRSF6-201ENST00000244020 CCDC43Q96MW1 224 aaKnown RBP10.28□□□□□ -0.76
SRSF6-201ENST00000244020 TUBGCP2Q9BSJ2 902 aa10.28□□□□□ -0.76
SRSF6-201ENST00000244020 NOC4LQ9BVI4 516 aaKnown RBP10.28□□□□□ -0.76
SRSF6-201ENST00000244020 E7EVH7 732 aa10.28□□□□□ -0.76
SRSF6-201ENST00000244020 MEFVO15553 781 aaPredicted RBP10.28□□□□□ -0.76
SRSF6-201ENST00000244020 MOCS3O95396 460 aa10.28□□□□□ -0.76
SRSF6-201ENST00000244020 C2CD5Q86YS7 1000 aa10.28□□□□□ -0.76
SRSF6-201ENST00000244020 IFT20Q8IY31 132 aa10.28□□□□□ -0.76
SRSF6-201ENST00000244020 FNBP4Q8N3X1 1017 aaPredicted RBP10.28□□□□□ -0.76
SRSF6-201ENST00000244020 TAF4BQ92750 862 aa10.28□□□□□ -0.76
SRSF6-201ENST00000244020 RNF26Q9BY78 433 aaPredicted RBP10.28□□□□□ -0.76
SRSF6-201ENST00000244020 STIM2Q9P246 746 aa10.28□□□□□ -0.76
SRSF6-201ENST00000244020 BAIAP2L1Q9UHR4 511 aa10.28□□□□□ -0.76
SRSF6-201ENST00000244020 XDHP47989 1333 aa10.28□□□□□ -0.76
SRSF6-201ENST00000244020 EEF1GP26641 437 aaKnown RBP10.28□□□□□ -0.76
SRSF6-201ENST00000244020 GUCY1A3Q02108 690 aa10.28□□□□□ -0.76
SRSF6-201ENST00000244020 EARS2Q5JPH6 523 aaKnown RBP10.28□□□□□ -0.76
SRSF6-201ENST00000244020 EMBQ6PCB8 327 aa10.28□□□□□ -0.76
SRSF6-201ENST00000244020 KRT26Q7Z3Y9 468 aa10.28□□□□□ -0.76
SRSF6-201ENST00000244020 SPATS2Q86XZ4 545 aaKnown RBP10.28□□□□□ -0.76
SRSF6-201ENST00000244020 PPANQ9NQ55 473 aaKnown RBP10.28□□□□□ -0.76
SRSF6-201ENST00000244020 TNKSO95271 1327 aa10.27□□□□□ -0.76
SRSF6-201ENST00000244020 CYP27B1O15528 508 aa10.27□□□□□ -0.76
SRSF6-201ENST00000244020 RAD21O60216 631 aa10.27□□□□□ -0.76
SRSF6-201ENST00000244020 PCK1P35558 622 aa10.27□□□□□ -0.76
SRSF6-201ENST00000244020 RNASE9P60153 205 aaKnown RBP10.27□□□□□ -0.76
SRSF6-201ENST00000244020 TCIRG1Q13488 830 aa10.27□□□□□ -0.76
SRSF6-201ENST00000244020 SH3RF1Q7Z6J0 888 aa10.27□□□□□ -0.76
SRSF6-201ENST00000244020 IQCA1Q86XH1 822 aa10.27□□□□□ -0.76
SRSF6-201ENST00000244020 CCDC170Q8IYT3 715 aa10.27□□□□□ -0.76
SRSF6-201ENST00000244020 MMRN2Q9H8L6 949 aa10.27□□□□□ -0.76
SRSF6-201ENST00000244020 SMARCAL1Q9NZC9 954 aa10.27□□□□□ -0.76
SRSF6-201ENST00000244020 ABCF2Q9UG63 623 aa10.27□□□□□ -0.76
SRSF6-201ENST00000244020 SNX12Q9UMY4 172 aa10.27□□□□□ -0.76
SRSF6-201ENST00000244020 SETSIPP0DME0 302 aa10.27□□□□□ -0.77
SRSF6-201ENST00000244020 TCP1P17987 556 aaKnown RBP10.27□□□□□ -0.77
SRSF6-201ENST00000244020 FECHP22830 423 aa10.27□□□□□ -0.77
SRSF6-201ENST00000244020 FAM114A2Q9NRY5 505 aa10.27□□□□□ -0.77
SRSF6-201ENST00000244020 LTN1O94822 1766 aa10.27□□□□□ -0.77
SRSF6-201ENST00000244020 BUB1BO60566 1050 aaPredicted RBP10.27□□□□□ -0.77
SRSF6-201ENST00000244020 ZPR1O75312 459 aa10.27□□□□□ -0.77
SRSF6-201ENST00000244020 TDRD12Q587J7 1177 aaKnown RBP10.27□□□□□ -0.77
SRSF6-201ENST00000244020 CCDC178Q5BJE1 867 aa10.27□□□□□ -0.77
SRSF6-201ENST00000244020 NFRKBQ6P4R8 1299 aa10.27□□□□□ -0.77
SRSF6-201ENST00000244020 CPLX4Q7Z7G2 160 aa10.27□□□□□ -0.77
SRSF6-201ENST00000244020 AENQ8WTP8 325 aaKnown RBP10.27□□□□□ -0.77
SRSF6-201ENST00000244020 DNAJC7Q99615 494 aa10.27□□□□□ -0.77
SRSF6-201ENST00000244020 MLXIPQ9HAP2 919 aa10.27□□□□□ -0.77
SRSF6-201ENST00000244020 HYOU1Q9Y4L1 999 aa10.27□□□□□ -0.77
SRSF6-201ENST00000244020 ZBED6P86452 979 aa10.26□□□□□ -0.77
SRSF6-201ENST00000244020 ATP2B2Q01814 1243 aa10.26□□□□□ -0.77
SRSF6-201ENST00000244020 CACNA2D4Q7Z3S7 1137 aa10.26□□□□□ -0.77
SRSF6-201ENST00000244020 FAM114A1Q8IWE2 563 aa10.26□□□□□ -0.77
SRSF6-201ENST00000244020 SYNE4Q8N205 404 aa10.26□□□□□ -0.77
SRSF6-201ENST00000244020 SPATA5Q8NB90 893 aa10.26□□□□□ -0.77
SRSF6-201ENST00000244020 GREM2Q9H772 168 aa10.26□□□□□ -0.77
SRSF6-201ENST00000244020 EPB41L4AQ9HCS5 686 aaPredicted RBP10.26□□□□□ -0.77
SRSF6-201ENST00000244020 FAM207AQ9NSI2 230 aaPredicted RBP10.26□□□□□ -0.77
SRSF6-201ENST00000244020 SUFUQ9UMX1 484 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms