RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 PSMD14O00487 310 aa26.38■■□□□ 1.81
MSX2-201ENST00000239243 BMP6P22004 513 aa26.38■■□□□ 1.81
MSX2-201ENST00000239243 GMLQ99445 158 aa26.38■■□□□ 1.81
MSX2-201ENST00000239243 ZNF277Q9NRM2 450 aaPredicted RBP26.38■■□□□ 1.81
MSX2-201ENST00000239243 ZBTB5O15062 677 aa26.38■■□□□ 1.81
MSX2-201ENST00000239243 ICA1Q05084 483 aa26.38■■□□□ 1.81
MSX2-201ENST00000239243 DLGAP5Q15398 846 aa26.38■■□□□ 1.81
MSX2-201ENST00000239243 MTMR8Q96EF0 704 aa26.38■■□□□ 1.81
MSX2-201ENST00000239243 NEMFO60524 1076 aa26.37■■□□□ 1.81
MSX2-201ENST00000239243 RAD17O75943 681 aa26.37■■□□□ 1.81
MSX2-201ENST00000239243 AFMP43652 599 aa26.37■■□□□ 1.81
MSX2-201ENST00000239243 NIM1KQ8IY84 436 aa26.37■■□□□ 1.81
MSX2-201ENST00000239243 AK8Q96MA6 479 aa26.37■■□□□ 1.81
MSX2-201ENST00000239243 CSRNP1Q96S65 589 aa26.37■■□□□ 1.81
MSX2-201ENST00000239243 PIM2Q9P1W9 311 aa26.37■■□□□ 1.81
MSX2-201ENST00000239243 CCNT1O60563 726 aaKnown RBP26.37■■□□□ 1.81
MSX2-201ENST00000239243 SLC1A4P43007 532 aa26.37■■□□□ 1.81
MSX2-201ENST00000239243 DPYDQ12882 1025 aa26.37■■□□□ 1.81
MSX2-201ENST00000239243 LETM2Q2VYF4 491 aa26.37■■□□□ 1.81
MSX2-201ENST00000239243 COA7Q96BR5 231 aa26.37■■□□□ 1.81
MSX2-201ENST00000239243 ZNRF3Q9ULT6 936 aa26.37■■□□□ 1.81
MSX2-201ENST00000239243 OR52Z1P0C646 297 aa26.36■■□□□ 1.81
MSX2-201ENST00000239243 LMOD1P29536 600 aaPredicted RBP26.36■■□□□ 1.81
MSX2-201ENST00000239243 RBM26Q5T8P6 1007 aaKnown RBP26.36■■□□□ 1.81
MSX2-201ENST00000239243 KCTD1Q719H9 257 aa26.36■■□□□ 1.81
MSX2-201ENST00000239243 TBCKQ8TEA7 893 aa26.36■■□□□ 1.81
MSX2-201ENST00000239243 TMEM60Q9H2L4 133 aa26.36■■□□□ 1.81
MSX2-201ENST00000239243 RIC8AQ9NPQ8 531 aa26.36■■□□□ 1.81
MSX2-201ENST00000239243 IMPACTQ9P2X3 320 aa26.36■■□□□ 1.81
MSX2-201ENST00000239243 BIN2Q9UBW5 565 aaPredicted RBP26.36■■□□□ 1.81
MSX2-201ENST00000239243 NRBP1Q9UHY1 535 aa26.36■■□□□ 1.81
MSX2-201ENST00000239243 SYNPO2Q9UMS6 1093 aa26.36■■□□□ 1.81
MSX2-201ENST00000239243 CBFA2T2O43439 604 aa26.35■■□□□ 1.81
MSX2-201ENST00000239243 SLURP2P0DP57 97 aa26.35■■□□□ 1.81
MSX2-201ENST00000239243 DHX8Q14562 1220 aaKnown RBP26.35■■□□□ 1.81
MSX2-201ENST00000239243 SEPT2Q15019 361 aa26.35■■□□□ 1.81
MSX2-201ENST00000239243 SLFN13Q68D06 897 aa26.35■■□□□ 1.81
MSX2-201ENST00000239243 TTBK2Q6IQ55 1244 aa26.35■■□□□ 1.81
MSX2-201ENST00000239243 CCDC125Q86Z20 511 aa26.35■■□□□ 1.81
MSX2-201ENST00000239243 AGBL3Q8NEM8 1001 aa26.35■■□□□ 1.81
MSX2-201ENST00000239243 GLT8D2Q9H1C3 349 aa26.35■■□□□ 1.81
MSX2-201ENST00000239243 ERCC5P28715 1186 aaPredicted RBP26.35■■□□□ 1.81
MSX2-201ENST00000239243 PDXDC2PQ6P474 469 aa26.35■■□□□ 1.81
MSX2-201ENST00000239243 GMCL1P1Q8NEA9 526 aa26.35■■□□□ 1.81
MSX2-201ENST00000239243 KIAA1524Q8TCG1 905 aa26.35■■□□□ 1.81
MSX2-201ENST00000239243 CCSER1Q9C0I3 900 aa26.35■■□□□ 1.81
MSX2-201ENST00000239243 IFNKQ9P0W0 207 aa26.35■■□□□ 1.81
MSX2-201ENST00000239243 UBA7P41226 1012 aa26.34■■□□□ 1.81
MSX2-201ENST00000239243 FANCCQ00597 558 aa26.34■■□□□ 1.81
MSX2-201ENST00000239243 JAKMIP3Q5VZ66 844 aa26.34■■□□□ 1.81
MSX2-201ENST00000239243 ENOX1Q8TC92 643 aaKnown RBP26.34■■□□□ 1.81
MSX2-201ENST00000239243 FAM151AQ8WW52 585 aa26.34■■□□□ 1.81
MSX2-201ENST00000239243 CUL5Q93034 780 aa26.34■■□□□ 1.81
MSX2-201ENST00000239243 XPO4Q9C0E2 1151 aaKnown RBP26.34■■□□□ 1.81
MSX2-201ENST00000239243 DISC1Q9NRI5 854 aa26.34■■□□□ 1.81
MSX2-201ENST00000239243 MRPL12P52815 198 aaKnown RBP26.34■■□□□ 1.81
MSX2-201ENST00000239243 GSDMDP57764 484 aa26.34■■□□□ 1.81
MSX2-201ENST00000239243 NOLC1Q14978 699 aaKnown RBP eCLIP26.34■■□□□ 1.81
MSX2-201ENST00000239243 HSD3B7Q9H2F3 369 aa26.34■■□□□ 1.81
MSX2-201ENST00000239243 GTPBP6O43824 516 aaPredicted RBP26.33■■□□□ 1.81
MSX2-201ENST00000239243 POLD1P28340 1107 aa26.33■■□□□ 1.81
MSX2-201ENST00000239243 STAT6P42226 847 aa26.33■■□□□ 1.81
MSX2-201ENST00000239243 FKBP1CQ5VVH2 108 aa26.33■■□□□ 1.81
MSX2-201ENST00000239243 ZNF70Q9UC06 446 aaPredicted RBP26.33■■□□□ 1.81
MSX2-201ENST00000239243 COL4A5P29400 1685 aa26.33■■□□□ 1.81
MSX2-201ENST00000239243 GDF11O95390 407 aa26.33■■□□□ 1.8
MSX2-201ENST00000239243 SLC16A2P36021 539 aa26.33■■□□□ 1.8
MSX2-201ENST00000239243 CCDC144BQ3MJ40 725 aa26.33■■□□□ 1.8
MSX2-201ENST00000239243 MTMR14Q8NCE2 650 aa26.33■■□□□ 1.8
MSX2-201ENST00000239243 GMCL1Q96IK5 515 aa26.33■■□□□ 1.8
MSX2-201ENST00000239243 USP17L10C9JJH3 530 aa26.32■■□□□ 1.8
MSX2-201ENST00000239243 RASSF8Q8NHQ8 419 aa26.32■■□□□ 1.8
MSX2-201ENST00000239243 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.32■■□□□ 1.8
MSX2-201ENST00000239243 SPTLC3Q9NUV7 552 aa26.32■■□□□ 1.8
MSX2-201ENST00000239243 ARFGEF1Q9Y6D6 1849 aa26.32■■□□□ 1.8
MSX2-201ENST00000239243 TCP10L2B9ZVM9 353 aa26.31■■□□□ 1.8
MSX2-201ENST00000239243 RAD21O60216 631 aa26.31■■□□□ 1.8
MSX2-201ENST00000239243 SPDYE2Q495Y8 402 aa26.31■■□□□ 1.8
MSX2-201ENST00000239243 CUEDC2Q9H467 287 aa26.31■■□□□ 1.8
MSX2-201ENST00000239243 RMND1Q9NWS8 449 aa26.31■■□□□ 1.8
MSX2-201ENST00000239243 PPP1R11O60927 126 aaPredicted RBP26.31■■□□□ 1.8
MSX2-201ENST00000239243 SERPINC1P01008 464 aa26.31■■□□□ 1.8
MSX2-201ENST00000239243 MYL1P05976 194 aa26.31■■□□□ 1.8
MSX2-201ENST00000239243 RRAGBQ5VZM2 374 aa26.31■■□□□ 1.8
MSX2-201ENST00000239243 SIAH1Q8IUQ4 282 aa26.31■■□□□ 1.8
MSX2-201ENST00000239243 FANCLQ9NW38 375 aa26.31■■□□□ 1.8
MSX2-201ENST00000239243 TMEM260Q9NX78 707 aa26.31■■□□□ 1.8
MSX2-201ENST00000239243 F5H6K3 240 aa26.3■■□□□ 1.8
MSX2-201ENST00000239243 GH2P01242 217 aa26.3■■□□□ 1.8
MSX2-201ENST00000239243 KLRC3Q07444 240 aa26.3■■□□□ 1.8
MSX2-201ENST00000239243 MAGEF1Q9HAY2 307 aa26.3■■□□□ 1.8
MSX2-201ENST00000239243 CLK2P49760 499 aaKnown RBP26.3■■□□□ 1.8
MSX2-201ENST00000239243 KARSQ15046 597 aaKnown RBP26.3■■□□□ 1.8
MSX2-201ENST00000239243 SHROOM1Q2M3G4 852 aaPredicted RBP26.3■■□□□ 1.8
MSX2-201ENST00000239243 DALRD3Q5D0E6 543 aaKnown RBP26.3■■□□□ 1.8
MSX2-201ENST00000239243 LRRC8AQ8IWT6 810 aa26.3■■□□□ 1.8
MSX2-201ENST00000239243 PYCARDQ9ULZ3 195 aa26.3■■□□□ 1.8
MSX2-201ENST00000239243 CLRN2A0PK11 232 aa26.29■■□□□ 1.8
MSX2-201ENST00000239243 ATP1A3P13637 1013 aa26.29■■□□□ 1.8
MSX2-201ENST00000239243 FILIP1Q7Z7B0 1213 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms