RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 FDX1P10109 184 aa14.84□□□□□ -0.03
LSM5-201ENST00000223084 ZKSCAN1P17029 563 aaPredicted RBP14.84□□□□□ -0.03
LSM5-201ENST00000223084 EN2P19622 333 aaPredicted RBP14.84□□□□□ -0.03
LSM5-201ENST00000223084 ADCK5Q3MIX3 580 aa14.84□□□□□ -0.03
LSM5-201ENST00000223084 LRRC2Q9BYS8 371 aa14.84□□□□□ -0.03
LSM5-201ENST00000223084 RNF208Q9H0X6 261 aa14.84□□□□□ -0.03
LSM5-201ENST00000223084 HOXC6P09630 235 aa14.83□□□□□ -0.04
LSM5-201ENST00000223084 PARP1P09874 1014 aaKnown RBP14.83□□□□□ -0.04
LSM5-201ENST00000223084 MCM5P33992 734 aa14.83□□□□□ -0.04
LSM5-201ENST00000223084 COPB2P35606 906 aa14.83□□□□□ -0.04
LSM5-201ENST00000223084 OAZ1P54368 228 aa14.83□□□□□ -0.04
LSM5-201ENST00000223084 KCTD2Q14681 263 aa14.83□□□□□ -0.04
LSM5-201ENST00000223084 SART3Q15020 963 aaKnown RBP14.83□□□□□ -0.04
LSM5-201ENST00000223084 GPATCH4Q5T3I0 446 aaKnown RBP14.83□□□□□ -0.04
LSM5-201ENST00000223084 ABRAQ8N0Z2 381 aa14.83□□□□□ -0.04
LSM5-201ENST00000223084 STAG2Q8N3U4 1231 aa14.83□□□□□ -0.04
LSM5-201ENST00000223084 RANBP17Q9H2T7 1088 aaKnown RBP14.83□□□□□ -0.04
LSM5-201ENST00000223084 LY9Q9HBG7 655 aa14.83□□□□□ -0.04
LSM5-201ENST00000223084 BAZ2BQ9UIF8 2168 aaKnown RBP14.83□□□□□ -0.04
LSM5-201ENST00000223084 TNRC18O15417 2968 aaPredicted RBP14.82□□□□□ -0.04
LSM5-201ENST00000223084 SH2B2O14492 632 aaPredicted RBP14.82□□□□□ -0.04
LSM5-201ENST00000223084 REC8O95072 547 aa14.82□□□□□ -0.04
LSM5-201ENST00000223084 ALAS1P13196 640 aa14.82□□□□□ -0.04
LSM5-201ENST00000223084 PRKAR2AP13861 404 aaKnown RBP14.82□□□□□ -0.04
LSM5-201ENST00000223084 HSPA4P34932 840 aa14.82□□□□□ -0.04
LSM5-201ENST00000223084 TSGA10IPQ3SY00 556 aa14.82□□□□□ -0.04
LSM5-201ENST00000223084 ASPRV1Q53RT3 343 aa14.82□□□□□ -0.04
LSM5-201ENST00000223084 MUM1L1Q5H9M0 696 aa14.82□□□□□ -0.04
LSM5-201ENST00000223084 TCEANC2Q96MN5 208 aa14.82□□□□□ -0.04
LSM5-201ENST00000223084 NEK1Q96PY6 1258 aa14.82□□□□□ -0.04
LSM5-201ENST00000223084 RNF146Q9NTX7 359 aa14.82□□□□□ -0.04
LSM5-201ENST00000223084 CCPG1Q9ULG6 757 aa14.82□□□□□ -0.04
LSM5-201ENST00000223084 ZNF236Q9UL36 1845 aa14.82□□□□□ -0.04
LSM5-201ENST00000223084 ICAM1P05362 532 aa14.81□□□□□ -0.04
LSM5-201ENST00000223084 CPA1P15085 419 aa14.81□□□□□ -0.04
LSM5-201ENST00000223084 CYP2C19P33261 490 aa14.81□□□□□ -0.04
LSM5-201ENST00000223084 CACNB2Q08289 660 aaPredicted RBP14.81□□□□□ -0.04
LSM5-201ENST00000223084 TRMT44Q8IYL2 757 aaKnown RBP14.81□□□□□ -0.04
LSM5-201ENST00000223084 ADGRF4Q8IZF3 695 aa14.81□□□□□ -0.04
LSM5-201ENST00000223084 CHST13Q8NET6 341 aa14.81□□□□□ -0.04
LSM5-201ENST00000223084 KCNB2Q92953 911 aa14.81□□□□□ -0.04
LSM5-201ENST00000223084 TRERF1Q96PN7 1200 aa14.81□□□□□ -0.04
LSM5-201ENST00000223084 MYL10Q9BUA6 226 aa14.81□□□□□ -0.04
LSM5-201ENST00000223084 VAT1LQ9HCJ6 419 aa14.81□□□□□ -0.04
LSM5-201ENST00000223084 MAD2L2Q9UI95 211 aa14.81□□□□□ -0.04
LSM5-201ENST00000223084 SNX14Q9Y5W7 946 aa14.81□□□□□ -0.04
LSM5-201ENST00000223084 PLXNA1Q9UIW2 1896 aa14.8□□□□□ -0.04
LSM5-201ENST00000223084 CCND3P30281 292 aaPredicted RBP14.8□□□□□ -0.04
LSM5-201ENST00000223084 CACNB1Q02641 598 aaPredicted RBP14.8□□□□□ -0.04
LSM5-201ENST00000223084 TROAPQ12815 778 aa14.8□□□□□ -0.04
LSM5-201ENST00000223084 GRM4Q14833 912 aa14.8□□□□□ -0.04
LSM5-201ENST00000223084 ZNF792Q3KQV3 632 aa14.8□□□□□ -0.04
LSM5-201ENST00000223084 MAP3K21Q5TCX8 1036 aa14.8□□□□□ -0.04
LSM5-201ENST00000223084 MFSD14CQ5VZR4 134 aa14.8□□□□□ -0.04
LSM5-201ENST00000223084 NFXL1Q6ZNB6 911 aa14.8□□□□□ -0.04
LSM5-201ENST00000223084 CATIPQ7Z7H3 387 aa14.8□□□□□ -0.04
LSM5-201ENST00000223084 RAB11FIP4Q86YS3 637 aa14.8□□□□□ -0.04
LSM5-201ENST00000223084 ANKRD35Q8N283 1001 aa14.8□□□□□ -0.04
LSM5-201ENST00000223084 NUP133Q8WUM0 1156 aa14.8□□□□□ -0.04
LSM5-201ENST00000223084 DDX11Q96FC9 970 aa14.8□□□□□ -0.04
LSM5-201ENST00000223084 MAML3Q96JK9 1138 aa14.8□□□□□ -0.04
LSM5-201ENST00000223084 TMEM87BQ96K49 555 aa14.8□□□□□ -0.04
LSM5-201ENST00000223084 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.8□□□□□ -0.04
LSM5-201ENST00000223084 ACAD9Q9H845 621 aa14.8□□□□□ -0.04
LSM5-201ENST00000223084 HMX1Q9NP08 348 aaPredicted RBP14.8□□□□□ -0.04
LSM5-201ENST00000223084 SLC5A4Q9NY91 659 aa14.8□□□□□ -0.04
LSM5-201ENST00000223084 RBBP6Q7Z6E9 1792 aaKnown RBP14.8□□□□□ -0.04
LSM5-201ENST00000223084 PALM3A6NDB9 673 aaPredicted RBP14.79□□□□□ -0.04
LSM5-201ENST00000223084 KLRF2D3W0D1 207 aa14.79□□□□□ -0.04
LSM5-201ENST00000223084 DHX16O60231 1041 aaKnown RBP14.79□□□□□ -0.04
LSM5-201ENST00000223084 IGHA2P01877 340 aa14.79□□□□□ -0.04
LSM5-201ENST00000223084 GJB1P08034 283 aa14.79□□□□□ -0.04
LSM5-201ENST00000223084 EXOSC10Q01780 885 aaKnown RBP14.79□□□□□ -0.04
LSM5-201ENST00000223084 KRT32Q14532 448 aa14.79□□□□□ -0.04
LSM5-201ENST00000223084 CDC37Q16543 378 aaPredicted RBP14.79□□□□□ -0.04
LSM5-201ENST00000223084 SLC35G1Q2M3R5 365 aa14.79□□□□□ -0.04
LSM5-201ENST00000223084 TKFCQ3LXA3 575 aa14.79□□□□□ -0.04
LSM5-201ENST00000223084 OLFML2BQ68BL8 750 aa14.79□□□□□ -0.04
LSM5-201ENST00000223084 DHX32Q7L7V1 743 aaKnown RBP14.79□□□□□ -0.04
LSM5-201ENST00000223084 ZNF654Q8IZM8 581 aa14.79□□□□□ -0.04
LSM5-201ENST00000223084 RPTORQ8N122 1335 aa14.79□□□□□ -0.04
LSM5-201ENST00000223084 SHISA4Q96DD7 197 aa14.79□□□□□ -0.04
LSM5-201ENST00000223084 JAKMIP1Q96N16 626 aaKnown RBP14.79□□□□□ -0.04
LSM5-201ENST00000223084 DEFB118Q96PH6 123 aa14.79□□□□□ -0.04
LSM5-201ENST00000223084 MTA3Q9BTC8 594 aa14.79□□□□□ -0.04
LSM5-201ENST00000223084 USP26Q9BXU7 913 aa14.79□□□□□ -0.04
LSM5-201ENST00000223084 JMJD4Q9H9V9 463 aa14.79□□□□□ -0.04
LSM5-201ENST00000223084 A1CFQ9NQ94 594 aaKnown RBP14.79□□□□□ -0.04
LSM5-201ENST00000223084 PAK6Q9NQU5 681 aaPredicted RBP14.79□□□□□ -0.04
LSM5-201ENST00000223084 FBXO40Q9UH90 709 aa14.79□□□□□ -0.04
LSM5-201ENST00000223084 MYH6P13533 1939 aa14.78□□□□□ -0.04
LSM5-201ENST00000223084 DNAJC25-GNG10A0A024R161 153 aa14.78□□□□□ -0.04
LSM5-201ENST00000223084 CCDC69A6NI79 296 aa14.78□□□□□ -0.04
LSM5-201ENST00000223084 RXRAP19793 462 aa14.78□□□□□ -0.04
LSM5-201ENST00000223084 GJA8P48165 433 aa14.78□□□□□ -0.04
LSM5-201ENST00000223084 QRICH1Q2TAL8 776 aa14.78□□□□□ -0.04
LSM5-201ENST00000223084 USH1GQ495M9 461 aa14.78□□□□□ -0.04
LSM5-201ENST00000223084 PRAMEF19Q5SWL8 479 aa14.78□□□□□ -0.04
LSM5-201ENST00000223084 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.78□□□□□ -0.04
LSM5-201ENST00000223084 TRPV1Q8NER1 839 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms