RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 VAT1LQ9HCJ6 419 aa17.13■□□□□ 0.33
PCOLCE-201ENST00000223061 PALM3A6NDB9 673 aaPredicted RBP17.12■□□□□ 0.33
PCOLCE-201ENST00000223061 ADCY3O60266 1144 aa17.12■□□□□ 0.33
PCOLCE-201ENST00000223061 FCER1AP12319 257 aa17.12■□□□□ 0.33
PCOLCE-201ENST00000223061 IRF5Q13568 498 aa17.12■□□□□ 0.33
PCOLCE-201ENST00000223061 GRB14Q14449 540 aa17.12■□□□□ 0.33
PCOLCE-201ENST00000223061 Q6ZUG5 572 aa17.12■□□□□ 0.33
PCOLCE-201ENST00000223061 CCDC144CPQ8IYA2 1237 aa17.12■□□□□ 0.33
PCOLCE-201ENST00000223061 ADGRF4Q8IZF3 695 aa17.12■□□□□ 0.33
PCOLCE-201ENST00000223061 MMP19Q99542 508 aa17.12■□□□□ 0.33
PCOLCE-201ENST00000223061 CCPG1Q9ULG6 757 aa17.12■□□□□ 0.33
PCOLCE-201ENST00000223061 MGAMO43451 1857 aa17.11■□□□□ 0.33
PCOLCE-201ENST00000223061 ALAS1P13196 640 aa17.11■□□□□ 0.33
PCOLCE-201ENST00000223061 ADORA2AP29274 412 aa17.11■□□□□ 0.33
PCOLCE-201ENST00000223061 GRK4P32298 578 aa17.11■□□□□ 0.33
PCOLCE-201ENST00000223061 RGS2P41220 211 aa17.11■□□□□ 0.33
PCOLCE-201ENST00000223061 MAP2K5Q13163 448 aa17.11■□□□□ 0.33
PCOLCE-201ENST00000223061 SGMS1Q86VZ5 419 aa17.11■□□□□ 0.33
PCOLCE-201ENST00000223061 MICU3Q86XE3 530 aa17.11■□□□□ 0.33
PCOLCE-201ENST00000223061 CTCFLQ8NI51 663 aaPredicted RBP17.11■□□□□ 0.33
PCOLCE-201ENST00000223061 USP6NLQ92738 828 aa17.11■□□□□ 0.33
PCOLCE-201ENST00000223061 UPF3BQ9BZI7 483 aaKnown RBP17.11■□□□□ 0.33
PCOLCE-201ENST00000223061 BIN2Q9UBW5 565 aaPredicted RBP17.11■□□□□ 0.33
PCOLCE-201ENST00000223061 NAP1L2Q9ULW6 460 aaPredicted RBP17.11■□□□□ 0.33
PCOLCE-201ENST00000223061 STRNO43815 780 aa17.1■□□□□ 0.33
PCOLCE-201ENST00000223061 MYCP01106 439 aaPredicted RBP17.1■□□□□ 0.33
PCOLCE-201ENST00000223061 ICAM1P05362 532 aa17.1■□□□□ 0.33
PCOLCE-201ENST00000223061 KCTD2Q14681 263 aa17.1■□□□□ 0.33
PCOLCE-201ENST00000223061 CDC37Q16543 378 aaPredicted RBP17.1■□□□□ 0.33
PCOLCE-201ENST00000223061 SYNE3Q6ZMZ3 975 aa17.1■□□□□ 0.33
PCOLCE-201ENST00000223061 RUFY3Q7L099 469 aa17.1■□□□□ 0.33
PCOLCE-201ENST00000223061 DPP9Q86TI2 863 aa17.1■□□□□ 0.33
PCOLCE-201ENST00000223061 SLAIN1Q8ND83 568 aa17.1■□□□□ 0.33
PCOLCE-201ENST00000223061 JMJD4Q9H9V9 463 aa17.1■□□□□ 0.33
PCOLCE-201ENST00000223061 ZSWIM6Q9HCJ5 1215 aa17.1■□□□□ 0.33
PCOLCE-201ENST00000223061 RNF146Q9NTX7 359 aa17.1■□□□□ 0.33
PCOLCE-201ENST00000223061 BRPF3Q9ULD4 1205 aa17.1■□□□□ 0.33
PCOLCE-201ENST00000223061 CYP46A1Q9Y6A2 500 aa17.1■□□□□ 0.33
PCOLCE-201ENST00000223061 COL11A1P12107 1806 aaPredicted RBP17.1■□□□□ 0.33
PCOLCE-201ENST00000223061 KIF5BP33176 963 aa17.1■□□□□ 0.33
PCOLCE-201ENST00000223061 BRF1Q92994 677 aa17.1■□□□□ 0.33
PCOLCE-201ENST00000223061 TRERF1Q96PN7 1200 aa17.1■□□□□ 0.33
PCOLCE-201ENST00000223061 APBA2Q99767 749 aa17.1■□□□□ 0.33
PCOLCE-201ENST00000223061 TM6SF1Q9BZW5 370 aa17.1■□□□□ 0.33
PCOLCE-201ENST00000223061 KLF18A0A0U1RQI7 1052 aa17.09■□□□□ 0.33
PCOLCE-201ENST00000223061 CCDC85CA6NKD9 419 aa17.09■□□□□ 0.33
PCOLCE-201ENST00000223061 PGK2P07205 417 aa17.09■□□□□ 0.33
PCOLCE-201ENST00000223061 CALM1P0DP23 149 aa17.09■□□□□ 0.33
PCOLCE-201ENST00000223061 CALM2P0DP24 149 aa17.09■□□□□ 0.33
PCOLCE-201ENST00000223061 CALM3P0DP25 149 aa17.09■□□□□ 0.33
PCOLCE-201ENST00000223061 APOA5Q6Q788 366 aa17.09■□□□□ 0.33
PCOLCE-201ENST00000223061 NBPF11Q86T75 865 aa17.09■□□□□ 0.33
PCOLCE-201ENST00000223061 ABRAQ8N0Z2 381 aa17.09■□□□□ 0.33
PCOLCE-201ENST00000223061 CHST13Q8NET6 341 aa17.09■□□□□ 0.33
PCOLCE-201ENST00000223061 MAP3K14Q99558 947 aa17.09■□□□□ 0.33
PCOLCE-201ENST00000223061 COBLO75128 1261 aa17.08■□□□□ 0.32
PCOLCE-201ENST00000223061 XRCC5P13010 732 aaKnown RBP17.08■□□□□ 0.32
PCOLCE-201ENST00000223061 ANAPC15P60006 121 aa17.08■□□□□ 0.32
PCOLCE-201ENST00000223061 APOBRQ0VD83 1088 aa17.08■□□□□ 0.32
PCOLCE-201ENST00000223061 CCL14Q16627 93 aa17.08■□□□□ 0.32
PCOLCE-201ENST00000223061 SLC35G1Q2M3R5 365 aa17.08■□□□□ 0.32
PCOLCE-201ENST00000223061 QRICH1Q2TAL8 776 aa17.08■□□□□ 0.32
PCOLCE-201ENST00000223061 TKFCQ3LXA3 575 aa17.08■□□□□ 0.32
PCOLCE-201ENST00000223061 USH1GQ495M9 461 aa17.08■□□□□ 0.32
PCOLCE-201ENST00000223061 MUM1L1Q5H9M0 696 aa17.08■□□□□ 0.32
PCOLCE-201ENST00000223061 HOMER1Q86YM7 354 aa17.08■□□□□ 0.32
PCOLCE-201ENST00000223061 ANKRD35Q8N283 1001 aa17.08■□□□□ 0.32
PCOLCE-201ENST00000223061 PXYLP1Q8TE99 480 aa17.08■□□□□ 0.32
PCOLCE-201ENST00000223061 PIBF1Q8WXW3 757 aa17.08■□□□□ 0.32
PCOLCE-201ENST00000223061 ARMC5Q96C12 935 aa17.08■□□□□ 0.32
PCOLCE-201ENST00000223061 ACAD9Q9H845 621 aa17.08■□□□□ 0.32
PCOLCE-201ENST00000223061 FBXO40Q9UH90 709 aa17.08■□□□□ 0.32
PCOLCE-201ENST00000223061 ZBTB43O43298 467 aa17.07■□□□□ 0.32
PCOLCE-201ENST00000223061 PLEKHA8P1O95397 391 aa17.07■□□□□ 0.32
PCOLCE-201ENST00000223061 CMTR1Q8N1G2 835 aaKnown RBP17.07■□□□□ 0.32
PCOLCE-201ENST00000223061 FANCBQ8NB91 859 aa17.07■□□□□ 0.32
PCOLCE-201ENST00000223061 NPLOC4Q8TAT6 608 aa17.07■□□□□ 0.32
PCOLCE-201ENST00000223061 TRIB2Q92519 343 aa17.07■□□□□ 0.32
PCOLCE-201ENST00000223061 DDX11Q96FC9 970 aa17.07■□□□□ 0.32
PCOLCE-201ENST00000223061 GOLGA8BA8MQT2 603 aa17.07■□□□□ 0.32
PCOLCE-201ENST00000223061 CYTH3O43739 400 aa17.07■□□□□ 0.32
PCOLCE-201ENST00000223061 CAPN15O75808 1086 aa17.07■□□□□ 0.32
PCOLCE-201ENST00000223061 INHAP05111 366 aa17.07■□□□□ 0.32
PCOLCE-201ENST00000223061 ZNF333Q96JL9 665 aa17.07■□□□□ 0.32
PCOLCE-201ENST00000223061 PIGSQ96S52 555 aa17.07■□□□□ 0.32
PCOLCE-201ENST00000223061 PDRG1Q9NUG6 133 aa17.07■□□□□ 0.32
PCOLCE-201ENST00000223061 CENPFP49454 3210 aa17.06■□□□□ 0.32
PCOLCE-201ENST00000223061 HMGCRP04035 888 aa17.06■□□□□ 0.32
PCOLCE-201ENST00000223061 HOXC6P09630 235 aa17.06■□□□□ 0.32
PCOLCE-201ENST00000223061 GNAQP50148 359 aa17.06■□□□□ 0.32
PCOLCE-201ENST00000223061 TRIM32Q13049 653 aa17.06■□□□□ 0.32
PCOLCE-201ENST00000223061 LZTS2Q9BRK4 669 aa17.06■□□□□ 0.32
PCOLCE-201ENST00000223061 RIOX1Q9H6W3 641 aa17.06■□□□□ 0.32
PCOLCE-201ENST00000223061 SLC5A4Q9NY91 659 aa17.06■□□□□ 0.32
PCOLCE-201ENST00000223061 FLRT1Q9NZU1 646 aa17.06■□□□□ 0.32
PCOLCE-201ENST00000223061 PNMA2Q9UL42 364 aa17.06■□□□□ 0.32
PCOLCE-201ENST00000223061 PLXNB2O15031 1838 aa17.06■□□□□ 0.32
PCOLCE-201ENST00000223061 GOLGA8AA7E2F4 631 aa17.05■□□□□ 0.32
PCOLCE-201ENST00000223061 NFIBO00712 420 aa17.05■□□□□ 0.32
PCOLCE-201ENST00000223061 UBXN2AP68543 259 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms