RNA–Protein interactions for RNA: ENST00000221847.5

EBI3-201, Transcript of Epstein-Barr virus induced 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBI3, Length 1,186 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-201ENST00000221847 LIFRP42702 1097 aa18.7■□□□□ 0.58
EBI3-201ENST00000221847 ZNF654Q8IZM8 581 aa18.7■□□□□ 0.58
EBI3-201ENST00000221847 TMTC2Q8N394 836 aa18.7■□□□□ 0.58
EBI3-201ENST00000221847 ZNF333Q96JL9 665 aa18.7■□□□□ 0.58
EBI3-201ENST00000221847 MMP19Q99542 508 aa18.7■□□□□ 0.58
EBI3-201ENST00000221847 MYL10Q9BUA6 226 aa18.7■□□□□ 0.58
EBI3-201ENST00000221847 HOMER2Q9NSB8 354 aa18.7■□□□□ 0.58
EBI3-201ENST00000221847 CCDC69A6NI79 296 aa18.69■□□□□ 0.58
EBI3-201ENST00000221847 KLRF2D3W0D1 207 aa18.69■□□□□ 0.58
EBI3-201ENST00000221847 COBLO75128 1261 aa18.69■□□□□ 0.58
EBI3-201ENST00000221847 SEC24BO95487 1268 aa18.69■□□□□ 0.58
EBI3-201ENST00000221847 HMGB1P09429 215 aaKnown RBP18.69■□□□□ 0.58
EBI3-201ENST00000221847 ALAS1P13196 640 aa18.69■□□□□ 0.58
EBI3-201ENST00000221847 CCL14Q16627 93 aa18.69■□□□□ 0.58
EBI3-201ENST00000221847 DPP9Q86TI2 863 aa18.69■□□□□ 0.58
EBI3-201ENST00000221847 ADGRF4Q8IZF3 695 aa18.69■□□□□ 0.58
EBI3-201ENST00000221847 ABRAQ8N0Z2 381 aa18.69■□□□□ 0.58
EBI3-201ENST00000221847 NPLOC4Q8TAT6 608 aa18.69■□□□□ 0.58
EBI3-201ENST00000221847 NUP133Q8WUM0 1156 aa18.69■□□□□ 0.58
EBI3-201ENST00000221847 APBA2Q99767 749 aa18.69■□□□□ 0.58
EBI3-201ENST00000221847 VAT1LQ9HCJ6 419 aa18.69■□□□□ 0.58
EBI3-201ENST00000221847 CCPG1Q9ULG6 757 aa18.69■□□□□ 0.58
EBI3-201ENST00000221847 INHAP05111 366 aa18.68■□□□□ 0.58
EBI3-201ENST00000221847 ICAM1P05362 532 aa18.68■□□□□ 0.58
EBI3-201ENST00000221847 HOXC6P09630 235 aa18.68■□□□□ 0.58
EBI3-201ENST00000221847 KCTD2Q14681 263 aa18.68■□□□□ 0.58
EBI3-201ENST00000221847 MTFR1Q15390 333 aa18.68■□□□□ 0.58
EBI3-201ENST00000221847 BLOC1S2Q6QNY1 142 aa18.68■□□□□ 0.58
EBI3-201ENST00000221847 CHST13Q8NET6 341 aa18.68■□□□□ 0.58
EBI3-201ENST00000221847 TRIB2Q92519 343 aa18.68■□□□□ 0.58
EBI3-201ENST00000221847 TRERF1Q96PN7 1200 aa18.68■□□□□ 0.58
EBI3-201ENST00000221847 RNF146Q9NTX7 359 aa18.68■□□□□ 0.58
EBI3-201ENST00000221847 DHX16O60231 1041 aaKnown RBP18.67■□□□□ 0.58
EBI3-201ENST00000221847 DDAH1O94760 285 aa18.67■□□□□ 0.58
EBI3-201ENST00000221847 PGK2P07205 417 aa18.67■□□□□ 0.58
EBI3-201ENST00000221847 CASTP20810 708 aaKnown RBP18.67■□□□□ 0.58
EBI3-201ENST00000221847 PSMA5P28066 241 aa18.67■□□□□ 0.58
EBI3-201ENST00000221847 TRIM32Q13049 653 aa18.67■□□□□ 0.58
EBI3-201ENST00000221847 SLC35G1Q2M3R5 365 aa18.67■□□□□ 0.58
EBI3-201ENST00000221847 TKFCQ3LXA3 575 aa18.67■□□□□ 0.58
EBI3-201ENST00000221847 C8orf34Q49A92 452 aa18.67■□□□□ 0.58
EBI3-201ENST00000221847 SGMS1Q86VZ5 419 aa18.67■□□□□ 0.58
EBI3-201ENST00000221847 RAB11FIP4Q86YS3 637 aa18.67■□□□□ 0.58
EBI3-201ENST00000221847 JMJD4Q9H9V9 463 aa18.67■□□□□ 0.58
EBI3-201ENST00000221847 FLRT1Q9NZU1 646 aa18.67■□□□□ 0.58
EBI3-201ENST00000221847 FBXO40Q9UH90 709 aa18.67■□□□□ 0.58
EBI3-201ENST00000221847 SLC12A7Q9Y666 1083 aa18.67■□□□□ 0.58
EBI3-201ENST00000221847 ZNFX1Q9P2E3 1918 aaKnown RBP18.66■□□□□ 0.58
EBI3-201ENST00000221847 HMGCRP04035 888 aa18.66■□□□□ 0.58
EBI3-201ENST00000221847 RXRAP19793 462 aa18.66■□□□□ 0.58
EBI3-201ENST00000221847 RPS6KB1P23443 525 aa18.66■□□□□ 0.58
EBI3-201ENST00000221847 UBXN2AP68543 259 aa18.66■□□□□ 0.58
EBI3-201ENST00000221847 CDC37Q16543 378 aaPredicted RBP18.66■□□□□ 0.58
EBI3-201ENST00000221847 MUM1L1Q5H9M0 696 aa18.66■□□□□ 0.58
EBI3-201ENST00000221847 Q6ZUG5 572 aa18.66■□□□□ 0.58
EBI3-201ENST00000221847 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.66■□□□□ 0.58
EBI3-201ENST00000221847 TRMT44Q8IYL2 757 aaKnown RBP18.66■□□□□ 0.58
EBI3-201ENST00000221847 MAP3K14Q99558 947 aa18.66■□□□□ 0.58
EBI3-201ENST00000221847 ACAD9Q9H845 621 aa18.66■□□□□ 0.58
EBI3-201ENST00000221847 CENPFP49454 3210 aa18.66■□□□□ 0.58
EBI3-201ENST00000221847 SMCHD1A6NHR9 2005 aa18.66■□□□□ 0.58
EBI3-201ENST00000221847 ZNF236Q9UL36 1845 aa18.65■□□□□ 0.58
EBI3-201ENST00000221847 EIF5BO60841 1220 aaKnown RBP18.65■□□□□ 0.58
EBI3-201ENST00000221847 SOX10P56693 466 aa18.65■□□□□ 0.58
EBI3-201ENST00000221847 FGD1P98174 961 aa18.65■□□□□ 0.58
EBI3-201ENST00000221847 CCDC144CPQ8IYA2 1237 aa18.65■□□□□ 0.58
EBI3-201ENST00000221847 ANKRD35Q8N283 1001 aa18.65■□□□□ 0.58
EBI3-201ENST00000221847 CTCFLQ8NI51 663 aaPredicted RBP18.65■□□□□ 0.58
EBI3-201ENST00000221847 DDX11Q96FC9 970 aa18.65■□□□□ 0.58
EBI3-201ENST00000221847 ZSWIM6Q9HCJ5 1215 aa18.65■□□□□ 0.58
EBI3-201ENST00000221847 SLC5A4Q9NY91 659 aa18.65■□□□□ 0.58
EBI3-201ENST00000221847 BRPF3Q9ULD4 1205 aa18.65■□□□□ 0.58
EBI3-201ENST00000221847 CALM1P0DP23 149 aa18.64■□□□□ 0.57
EBI3-201ENST00000221847 CALM2P0DP24 149 aa18.64■□□□□ 0.57
EBI3-201ENST00000221847 CALM3P0DP25 149 aa18.64■□□□□ 0.57
EBI3-201ENST00000221847 CCL5P13501 91 aa18.64■□□□□ 0.57
EBI3-201ENST00000221847 KIF5BP33176 963 aa18.64■□□□□ 0.57
EBI3-201ENST00000221847 QRICH1Q2TAL8 776 aa18.64■□□□□ 0.57
EBI3-201ENST00000221847 ZNF792Q3KQV3 632 aa18.64■□□□□ 0.57
EBI3-201ENST00000221847 IFFO2Q5TF58 517 aa18.64■□□□□ 0.57
EBI3-201ENST00000221847 SYNE3Q6ZMZ3 975 aa18.64■□□□□ 0.57
EBI3-201ENST00000221847 MICU3Q86XE3 530 aa18.64■□□□□ 0.57
EBI3-201ENST00000221847 MTMR8Q96EF0 704 aa18.64■□□□□ 0.57
EBI3-201ENST00000221847 UNC93B1Q9H1C4 597 aa18.64■□□□□ 0.57
EBI3-201ENST00000221847 RIOX1Q9H6W3 641 aa18.64■□□□□ 0.57
EBI3-201ENST00000221847 PNMA2Q9UL42 364 aa18.64■□□□□ 0.57
EBI3-201ENST00000221847 DNAJC25-GNG10A0A024R161 153 aa18.63■□□□□ 0.57
EBI3-201ENST00000221847 KLF18A0A0U1RQI7 1052 aa18.63■□□□□ 0.57
EBI3-201ENST00000221847 CYTH3O43739 400 aa18.63■□□□□ 0.57
EBI3-201ENST00000221847 CACNB2Q08289 660 aaPredicted RBP18.63■□□□□ 0.57
EBI3-201ENST00000221847 USH1GQ495M9 461 aa18.63■□□□□ 0.57
EBI3-201ENST00000221847 APOA5Q6Q788 366 aa18.63■□□□□ 0.57
EBI3-201ENST00000221847 RUFY3Q7L099 469 aa18.63■□□□□ 0.57
EBI3-201ENST00000221847 FANCBQ8NB91 859 aa18.63■□□□□ 0.57
EBI3-201ENST00000221847 MAML3Q96JK9 1138 aa18.63■□□□□ 0.57
EBI3-201ENST00000221847 TMEM106CQ9BVX2 250 aa18.63■□□□□ 0.57
EBI3-201ENST00000221847 UPF3BQ9BZI7 483 aaKnown RBP18.63■□□□□ 0.57
EBI3-201ENST00000221847 TM6SF1Q9BZW5 370 aa18.63■□□□□ 0.57
EBI3-201ENST00000221847 RNF208Q9H0X6 261 aa18.63■□□□□ 0.57
EBI3-201ENST00000221847 A1CFQ9NQ94 594 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms