RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 XRN1Q8IZH2 1706 aaKnown RBP13.77□□□□□ -0.2
TM9SF4-201ENST00000217315 OGFOD1Q8N543 542 aa13.77□□□□□ -0.2
TM9SF4-201ENST00000217315 GDAP1L1Q96MZ0 367 aa13.77□□□□□ -0.2
TM9SF4-201ENST00000217315 MAP3K14Q99558 947 aa13.77□□□□□ -0.2
TM9SF4-201ENST00000217315 FAM217BQ9NTX9 383 aaPredicted RBP13.77□□□□□ -0.2
TM9SF4-201ENST00000217315 RWDD2AQ9UIY3 292 aa13.77□□□□□ -0.2
TM9SF4-201ENST00000217315 SMIM22K7EJ46 135 aa13.77□□□□□ -0.21
TM9SF4-201ENST00000217315 ENC1O14682 589 aa13.77□□□□□ -0.21
TM9SF4-201ENST00000217315 ORC4O43929 436 aa13.77□□□□□ -0.21
TM9SF4-201ENST00000217315 MAGEA1P43355 309 aa13.77□□□□□ -0.21
TM9SF4-201ENST00000217315 TROAPQ12815 778 aa13.77□□□□□ -0.21
TM9SF4-201ENST00000217315 MTF1Q14872 753 aa13.77□□□□□ -0.21
TM9SF4-201ENST00000217315 KMT5BQ4FZB7 885 aa13.77□□□□□ -0.21
TM9SF4-201ENST00000217315 ODF2Q5BJF6 829 aa13.77□□□□□ -0.21
TM9SF4-201ENST00000217315 NCAPH2Q6IBW4 605 aa13.77□□□□□ -0.21
TM9SF4-201ENST00000217315 HDXQ7Z353 690 aa13.77□□□□□ -0.21
TM9SF4-201ENST00000217315 NBPF3Q9H094 633 aa13.77□□□□□ -0.21
TM9SF4-201ENST00000217315 HPSEQ9Y251 543 aa13.77□□□□□ -0.21
TM9SF4-201ENST00000217315 RGPD1P0DJD0 1748 aa13.77□□□□□ -0.21
TM9SF4-201ENST00000217315 SLIT3O75094 1523 aa13.77□□□□□ -0.21
TM9SF4-201ENST00000217315 CDR1P51861 262 aa13.77□□□□□ -0.21
TM9SF4-201ENST00000217315 TUBB4BP68371 445 aa13.77□□□□□ -0.21
TM9SF4-201ENST00000217315 GABPB1Q06547 395 aaPredicted RBP13.77□□□□□ -0.21
TM9SF4-201ENST00000217315 ZYXQ15942 572 aaKnown RBP13.77□□□□□ -0.21
TM9SF4-201ENST00000217315 CNOT6LQ96LI5 555 aaKnown RBP13.77□□□□□ -0.21
TM9SF4-201ENST00000217315 CD209Q9NNX6 404 aa13.77□□□□□ -0.21
TM9SF4-201ENST00000217315 CHMP2AO43633 222 aa13.76□□□□□ -0.21
TM9SF4-201ENST00000217315 ATP2C1P98194 919 aaPredicted RBP13.76□□□□□ -0.21
TM9SF4-201ENST00000217315 AEBP2Q6ZN18 517 aaPredicted RBP13.76□□□□□ -0.21
TM9SF4-201ENST00000217315 CCDC84Q86UT8 332 aaPredicted RBP13.76□□□□□ -0.21
TM9SF4-201ENST00000217315 BCL9O00512 1426 aa13.76□□□□□ -0.21
TM9SF4-201ENST00000217315 PRCPP42785 496 aa13.76□□□□□ -0.21
TM9SF4-201ENST00000217315 CLCN6P51797 869 aa13.76□□□□□ -0.21
TM9SF4-201ENST00000217315 RNASE9P60153 205 aaKnown RBP13.76□□□□□ -0.21
TM9SF4-201ENST00000217315 MSL1Q68DK7 614 aa13.76□□□□□ -0.21
TM9SF4-201ENST00000217315 SECISBP2LQ93073 1101 aaKnown RBP13.76□□□□□ -0.21
TM9SF4-201ENST00000217315 SERPINB13Q9UIV8 391 aa13.76□□□□□ -0.21
TM9SF4-201ENST00000217315 NALCNQ8IZF0 1738 aa13.76□□□□□ -0.21
TM9SF4-201ENST00000217315 MFAP3LO75121 409 aa13.76□□□□□ -0.21
TM9SF4-201ENST00000217315 CAPN2P17655 700 aa13.76□□□□□ -0.21
TM9SF4-201ENST00000217315 C3orf67Q6ZVT6 689 aa13.76□□□□□ -0.21
TM9SF4-201ENST00000217315 KCTD1Q719H9 257 aa13.76□□□□□ -0.21
TM9SF4-201ENST00000217315 IFIH1Q9BYX4 1025 aaKnown RBP13.76□□□□□ -0.21
TM9SF4-201ENST00000217315 IRX2Q9BZI1 471 aaPredicted RBP13.76□□□□□ -0.21
TM9SF4-201ENST00000217315 CDC23Q9UJX2 597 aa13.76□□□□□ -0.21
TM9SF4-201ENST00000217315 MYO6Q9UM54 1294 aa13.76□□□□□ -0.21
TM9SF4-201ENST00000217315 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.76□□□□□ -0.21
TM9SF4-201ENST00000217315 BBOX1O75936 387 aa13.75□□□□□ -0.21
TM9SF4-201ENST00000217315 TUBB2AQ13885 445 aa13.75□□□□□ -0.21
TM9SF4-201ENST00000217315 PLS1Q14651 629 aa13.75□□□□□ -0.21
TM9SF4-201ENST00000217315 NFIXQ14938 502 aa13.75□□□□□ -0.21
TM9SF4-201ENST00000217315 LRRC41Q15345 812 aa13.75□□□□□ -0.21
TM9SF4-201ENST00000217315 TCP11X2Q5H9J9 407 aa13.75□□□□□ -0.21
TM9SF4-201ENST00000217315 C12orf60Q5U649 245 aa13.75□□□□□ -0.21
TM9SF4-201ENST00000217315 FBXO33Q7Z6M2 555 aa13.75□□□□□ -0.21
TM9SF4-201ENST00000217315 ANKRD13CQ8N6S4 541 aa13.75□□□□□ -0.21
TM9SF4-201ENST00000217315 PANX2Q96RD6 677 aa13.75□□□□□ -0.21
TM9SF4-201ENST00000217315 HINFPQ9BQA5 517 aa13.75□□□□□ -0.21
TM9SF4-201ENST00000217315 RIOK1Q9BRS2 568 aaKnown RBP13.75□□□□□ -0.21
TM9SF4-201ENST00000217315 TUBB2BQ9BVA1 445 aa13.75□□□□□ -0.21
TM9SF4-201ENST00000217315 EPC1Q9H2F5 836 aa13.75□□□□□ -0.21
TM9SF4-201ENST00000217315 SAR1BQ9Y6B6 198 aa13.75□□□□□ -0.21
TM9SF4-201ENST00000217315 H0YHG0 523 aa13.75□□□□□ -0.21
TM9SF4-201ENST00000217315 CETN3O15182 167 aa13.75□□□□□ -0.21
TM9SF4-201ENST00000217315 ERLIN2O94905 339 aa13.75□□□□□ -0.21
TM9SF4-201ENST00000217315 FAM13AO94988 1023 aa13.75□□□□□ -0.21
TM9SF4-201ENST00000217315 OAS2P29728 719 aaKnown RBP13.75□□□□□ -0.21
TM9SF4-201ENST00000217315 SMC1AQ14683 1233 aaKnown RBP13.75□□□□□ -0.21
TM9SF4-201ENST00000217315 FOXP4Q8IVH2 680 aaPredicted RBP13.75□□□□□ -0.21
TM9SF4-201ENST00000217315 ZNF710Q8N1W2 664 aa13.75□□□□□ -0.21
TM9SF4-201ENST00000217315 P2RX5Q93086 422 aa13.75□□□□□ -0.21
TM9SF4-201ENST00000217315 PKD2L1Q9P0L9 805 aa13.75□□□□□ -0.21
TM9SF4-201ENST00000217315 LAD1O00515 517 aa13.75□□□□□ -0.21
TM9SF4-201ENST00000217315 NCAPHQ15003 741 aa13.75□□□□□ -0.21
TM9SF4-201ENST00000217315 CEP95Q96GE4 821 aa13.75□□□□□ -0.21
TM9SF4-201ENST00000217315 HAUS4Q9H6D7 363 aa13.75□□□□□ -0.21
TM9SF4-201ENST00000217315 EHMT1Q9H9B1 1298 aa13.75□□□□□ -0.21
TM9SF4-201ENST00000217315 DDX25Q9UHL0 483 aaKnown RBP13.75□□□□□ -0.21
TM9SF4-201ENST00000217315 ACTN4O43707 911 aaKnown RBP13.74□□□□□ -0.21
TM9SF4-201ENST00000217315 TRIM37O94972 964 aa13.74□□□□□ -0.21
TM9SF4-201ENST00000217315 EEF1GP26641 437 aaKnown RBP13.74□□□□□ -0.21
TM9SF4-201ENST00000217315 AK8Q96MA6 479 aa13.74□□□□□ -0.21
TM9SF4-201ENST00000217315 PCDHA1Q9Y5I3 950 aa13.74□□□□□ -0.21
TM9SF4-201ENST00000217315 TUBBP07437 444 aa13.74□□□□□ -0.21
TM9SF4-201ENST00000217315 HAUS3Q68CZ6 603 aa13.74□□□□□ -0.21
TM9SF4-201ENST00000217315 STXBP4Q6ZWJ1 553 aa13.74□□□□□ -0.21
TM9SF4-201ENST00000217315 NBPF11Q86T75 865 aa13.74□□□□□ -0.21
TM9SF4-201ENST00000217315 TXNRD3Q86VQ6 643 aa13.74□□□□□ -0.21
TM9SF4-201ENST00000217315 MYOCDQ8IZQ8 938 aa13.74□□□□□ -0.21
TM9SF4-201ENST00000217315 LARP4BQ92615 738 aaKnown RBP13.74□□□□□ -0.21
TM9SF4-201ENST00000217315 RABGGTAQ92696 567 aa13.74□□□□□ -0.21
TM9SF4-201ENST00000217315 WDR24Q96S15 920 aa13.74□□□□□ -0.21
TM9SF4-201ENST00000217315 UBE2SQ16763 222 aa13.74□□□□□ -0.21
TM9SF4-201ENST00000217315 PRR16Q569H4 304 aa13.74□□□□□ -0.21
TM9SF4-201ENST00000217315 SRGAP1Q7Z6B7 1085 aa13.74□□□□□ -0.21
TM9SF4-201ENST00000217315 TSPYL1Q9H0U9 437 aa13.74□□□□□ -0.21
TM9SF4-201ENST00000217315 USP17L5A8MUK1 530 aa13.74□□□□□ -0.21
TM9SF4-201ENST00000217315 FOXP2O15409 715 aa13.74□□□□□ -0.21
TM9SF4-201ENST00000217315 HS2ST1Q7LGA3 356 aa13.74□□□□□ -0.21
TM9SF4-201ENST00000217315 DHTKD1Q96HY7 919 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms