RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 TMOD2Q9NZR1 351 aa10.89□□□□□ -0.67
CSTF1-201ENST00000217109 MYO6Q9UM54 1294 aa10.89□□□□□ -0.67
CSTF1-201ENST00000217109 RAPGEF1Q13905 1077 aa10.89□□□□□ -0.67
CSTF1-201ENST00000217109 SRGAP1Q7Z6B7 1085 aa10.89□□□□□ -0.67
CSTF1-201ENST00000217109 DGKHQ86XP1 1220 aa10.89□□□□□ -0.67
CSTF1-201ENST00000217109 CNOT6LQ96LI5 555 aaKnown RBP10.89□□□□□ -0.67
CSTF1-201ENST00000217109 PANX2Q96RD6 677 aa10.89□□□□□ -0.67
CSTF1-201ENST00000217109 MTA3Q9BTC8 594 aa10.89□□□□□ -0.67
CSTF1-201ENST00000217109 USP40Q9NVE5 1235 aa10.89□□□□□ -0.67
CSTF1-201ENST00000217109 RWDD2AQ9UIY3 292 aa10.89□□□□□ -0.67
CSTF1-201ENST00000217109 JCADQ9P266 1359 aa10.89□□□□□ -0.67
CSTF1-201ENST00000217109 USH1GQ495M9 461 aa10.89□□□□□ -0.67
CSTF1-201ENST00000217109 RABGGTAQ92696 567 aa10.89□□□□□ -0.67
CSTF1-201ENST00000217109 SAR1BQ9Y6B6 198 aa10.89□□□□□ -0.67
CSTF1-201ENST00000217109 NALCNQ8IZF0 1738 aa10.89□□□□□ -0.67
CSTF1-201ENST00000217109 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.88□□□□□ -0.67
CSTF1-201ENST00000217109 SLC1A4P43007 532 aa10.88□□□□□ -0.67
CSTF1-201ENST00000217109 MAGEA1P43355 309 aa10.88□□□□□ -0.67
CSTF1-201ENST00000217109 ATP2C1P98194 919 aaPredicted RBP10.88□□□□□ -0.67
CSTF1-201ENST00000217109 PRPF4BQ13523 1007 aaKnown RBP10.88□□□□□ -0.67
CSTF1-201ENST00000217109 ODF2Q5BJF6 829 aa10.88□□□□□ -0.67
CSTF1-201ENST00000217109 DCAF17Q5H9S7 520 aaPredicted RBP10.88□□□□□ -0.67
CSTF1-201ENST00000217109 ADGRG1Q9Y653 693 aa10.88□□□□□ -0.67
CSTF1-201ENST00000217109 XDHP47989 1333 aa10.88□□□□□ -0.67
CSTF1-201ENST00000217109 CAMTA1Q9Y6Y1 1673 aa10.88□□□□□ -0.67
CSTF1-201ENST00000217109 SPDYE3A6NKU9 549 aa10.88□□□□□ -0.67
CSTF1-201ENST00000217109 PPP1R12BO60237 982 aaPredicted RBP10.88□□□□□ -0.67
CSTF1-201ENST00000217109 TBCAO75347 108 aaKnown RBP10.88□□□□□ -0.67
CSTF1-201ENST00000217109 CDK8P49336 464 aa10.88□□□□□ -0.67
CSTF1-201ENST00000217109 FXR1P51114 621 aaKnown RBP eCLIP10.88□□□□□ -0.67
CSTF1-201ENST00000217109 GYS2P54840 703 aa10.88□□□□□ -0.67
CSTF1-201ENST00000217109 PPARDQ03181 441 aa10.88□□□□□ -0.67
CSTF1-201ENST00000217109 ZFYVE27Q5T4F4 411 aa10.88□□□□□ -0.67
CSTF1-201ENST00000217109 TXNRD3Q86VQ6 643 aa10.88□□□□□ -0.67
CSTF1-201ENST00000217109 LINC00116Q8NCU8 138 aa10.88□□□□□ -0.67
CSTF1-201ENST00000217109 LRRN4CLQ8ND94 238 aa10.88□□□□□ -0.67
CSTF1-201ENST00000217109 ARHGEF1Q92888 912 aaKnown RBP10.88□□□□□ -0.67
CSTF1-201ENST00000217109 SECISBP2LQ93073 1101 aaKnown RBP10.88□□□□□ -0.67
CSTF1-201ENST00000217109 IFIH1Q9BYX4 1025 aaKnown RBP10.88□□□□□ -0.67
CSTF1-201ENST00000217109 PPP1R1BQ9UD71 204 aaPredicted RBP10.88□□□□□ -0.67
CSTF1-201ENST00000217109 NARFQ9UHQ1 456 aa10.88□□□□□ -0.67
CSTF1-201ENST00000217109 GOLGA6L10A6NI86 522 aa10.88□□□□□ -0.67
CSTF1-201ENST00000217109 USP8P40818 1118 aa10.88□□□□□ -0.67
CSTF1-201ENST00000217109 RCAN1P53805 252 aa10.88□□□□□ -0.67
CSTF1-201ENST00000217109 LONRF2Q1L5Z9 754 aa10.88□□□□□ -0.67
CSTF1-201ENST00000217109 NCAPH2Q6IBW4 605 aa10.88□□□□□ -0.67
CSTF1-201ENST00000217109 IFT81Q8WYA0 676 aa10.88□□□□□ -0.67
CSTF1-201ENST00000217109 RIOK1Q9BRS2 568 aaKnown RBP10.88□□□□□ -0.67
CSTF1-201ENST00000217109 MRPL44Q9H9J2 332 aaKnown RBP10.88□□□□□ -0.67
CSTF1-201ENST00000217109 LEMD3Q9Y2U8 911 aa10.88□□□□□ -0.67
CSTF1-201ENST00000217109 RPS6KA4O75676 772 aa10.87□□□□□ -0.67
CSTF1-201ENST00000217109 CD44P16070 742 aaKnown RBP10.87□□□□□ -0.67
CSTF1-201ENST00000217109 CACNB1Q02641 598 aaPredicted RBP10.87□□□□□ -0.67
CSTF1-201ENST00000217109 RGS22Q8NE09 1264 aa10.87□□□□□ -0.67
CSTF1-201ENST00000217109 NUP58Q9BVL2 599 aa10.87□□□□□ -0.67
CSTF1-201ENST00000217109 RABEP2Q9H5N1 569 aa10.87□□□□□ -0.67
CSTF1-201ENST00000217109 H0YHG0 523 aa10.87□□□□□ -0.67
CSTF1-201ENST00000217109 SF3B3Q15393 1217 aaKnown RBP10.87□□□□□ -0.67
CSTF1-201ENST00000217109 PTPROQ16827 1216 aa10.87□□□□□ -0.67
CSTF1-201ENST00000217109 VPS36Q86VN1 386 aa10.87□□□□□ -0.67
CSTF1-201ENST00000217109 ERMNQ8TAM6 284 aa10.87□□□□□ -0.67
CSTF1-201ENST00000217109 HPS3Q969F9 1004 aa10.87□□□□□ -0.67
CSTF1-201ENST00000217109 PDE11AQ9HCR9 933 aa10.87□□□□□ -0.67
CSTF1-201ENST00000217109 RSPH14Q9UHP6 348 aa10.87□□□□□ -0.67
CSTF1-201ENST00000217109 PCDHA12Q9UN75 941 aa10.87□□□□□ -0.67
CSTF1-201ENST00000217109 RIC1Q4ADV7 1423 aa10.87□□□□□ -0.67
CSTF1-201ENST00000217109 NDUFA10O95299 355 aa10.87□□□□□ -0.67
CSTF1-201ENST00000217109 BMP6P22004 513 aa10.87□□□□□ -0.67
CSTF1-201ENST00000217109 EVX2Q03828 476 aa10.87□□□□□ -0.67
CSTF1-201ENST00000217109 PLS1Q14651 629 aa10.87□□□□□ -0.67
CSTF1-201ENST00000217109 NR1I3Q14994 352 aa10.87□□□□□ -0.67
CSTF1-201ENST00000217109 SEC23AQ15436 765 aa10.87□□□□□ -0.67
CSTF1-201ENST00000217109 TXNRD1Q16881 649 aa10.87□□□□□ -0.67
CSTF1-201ENST00000217109 ARL6IP4Q66PJ3 421 aaKnown RBP10.87□□□□□ -0.67
CSTF1-201ENST00000217109 RAD9BQ6WBX8 426 aa10.87□□□□□ -0.67
CSTF1-201ENST00000217109 KCTD1Q719H9 257 aa10.87□□□□□ -0.67
CSTF1-201ENST00000217109 KIAA0825Q8IV33 1275 aa10.87□□□□□ -0.67
CSTF1-201ENST00000217109 RGPD2P0DJD1 1756 aa10.87□□□□□ -0.67
CSTF1-201ENST00000217109 CHMP2AO43633 222 aa10.87□□□□□ -0.67
CSTF1-201ENST00000217109 NFIXQ14938 502 aa10.87□□□□□ -0.67
CSTF1-201ENST00000217109 CCDC65Q8IXS2 484 aa10.87□□□□□ -0.67
CSTF1-201ENST00000217109 P2RX5Q93086 422 aa10.87□□□□□ -0.67
CSTF1-201ENST00000217109 HAUS4Q9H6D7 363 aa10.87□□□□□ -0.67
CSTF1-201ENST00000217109 ABHD10Q9NUJ1 306 aa10.87□□□□□ -0.67
CSTF1-201ENST00000217109 BCCIPQ9P287 314 aaKnown RBP eCLIP10.87□□□□□ -0.67
CSTF1-201ENST00000217109 A0A1B0GTH6 734 aa10.86□□□□□ -0.67
CSTF1-201ENST00000217109 DPYDQ12882 1025 aa10.86□□□□□ -0.67
CSTF1-201ENST00000217109 UBE2SQ16763 222 aa10.86□□□□□ -0.67
CSTF1-201ENST00000217109 CHP1Q99653 195 aa10.86□□□□□ -0.67
CSTF1-201ENST00000217109 PSTPIP2Q9H939 334 aa10.86□□□□□ -0.67
CSTF1-201ENST00000217109 ADD3Q9UEY8 706 aaKnown RBP10.86□□□□□ -0.67
CSTF1-201ENST00000217109 THRAP3Q9Y2W1 955 aaKnown RBP10.86□□□□□ -0.67
CSTF1-201ENST00000217109 SAMM50Q9Y512 469 aa10.86□□□□□ -0.67
CSTF1-201ENST00000217109 KIF13AQ9H1H9 1805 aa10.86□□□□□ -0.67
CSTF1-201ENST00000217109 TTC26A0AVF1 554 aa10.86□□□□□ -0.67
CSTF1-201ENST00000217109 ORC4O43929 436 aa10.86□□□□□ -0.67
CSTF1-201ENST00000217109 VEGFAP15692 232 aaPredicted RBP10.86□□□□□ -0.67
CSTF1-201ENST00000217109 ZSCAN20P17040 1043 aaPredicted RBP10.86□□□□□ -0.67
CSTF1-201ENST00000217109 PKN1Q16512 942 aa10.86□□□□□ -0.67
CSTF1-201ENST00000217109 REXO1L1PQ8IX06 675 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms