RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 Sel1lQ9Z2G6 790 aa12.87□□□□□ -0.35
Vps54-202ENSMUST00000109578 Pnpla6Q3TRM4 1355 aa12.87□□□□□ -0.35
Vps54-202ENSMUST00000109578 Gm7347D3YYI9 267 aa12.87□□□□□ -0.35
Vps54-202ENSMUST00000109578 Speer4aF8VPX6 267 aa12.87□□□□□ -0.35
Vps54-202ENSMUST00000109578 Slurp2P0DP59 97 aa12.87□□□□□ -0.35
Vps54-202ENSMUST00000109578 Eno4Q8C042 619 aa12.87□□□□□ -0.35
Vps54-202ENSMUST00000109578 Kif2bQ8C0N1 668 aa12.87□□□□□ -0.35
Vps54-202ENSMUST00000109578 Krt222Q8CCX5 294 aa12.87□□□□□ -0.35
Vps54-202ENSMUST00000109578 Sh2b1Q91ZM2 756 aa12.87□□□□□ -0.35
Vps54-202ENSMUST00000109578 Tex13cD3YU32 604 aa12.87□□□□□ -0.35
Vps54-202ENSMUST00000109578 ErmardE9Q048 622 aa12.87□□□□□ -0.35
Vps54-202ENSMUST00000109578 Gm10378F6XQQ1 160 aa12.87□□□□□ -0.35
Vps54-202ENSMUST00000109578 Aco1P28271 889 aaKnown RBP12.87□□□□□ -0.35
Vps54-202ENSMUST00000109578 Cep131Q62036 1060 aa12.87□□□□□ -0.35
Vps54-202ENSMUST00000109578 Lrrn2Q6PHP6 730 aa12.87□□□□□ -0.35
Vps54-202ENSMUST00000109578 Arhgef6Q8K4I3 771 aa12.87□□□□□ -0.35
Vps54-202ENSMUST00000109578 Adarb2Q9JI20 745 aa12.87□□□□□ -0.35
Vps54-202ENSMUST00000109578 Dnajc7Q9QYI3 494 aa12.87□□□□□ -0.35
Vps54-202ENSMUST00000109578 Map3k15A2AQW0 1331 aa12.87□□□□□ -0.35
Vps54-202ENSMUST00000109578 Ano3A2AHL1 981 aa12.86□□□□□ -0.35
Vps54-202ENSMUST00000109578 Nr1i2O54915 431 aa12.86□□□□□ -0.35
Vps54-202ENSMUST00000109578 Eif3j1Q3UGC7 261 aaKnown RBP12.86□□□□□ -0.35
Vps54-202ENSMUST00000109578 Eif3j2Q66JS6 263 aa12.86□□□□□ -0.35
Vps54-202ENSMUST00000109578 Cnnm4Q69ZF7 771 aa12.86□□□□□ -0.35
Vps54-202ENSMUST00000109578 Asic1Q6NXK8 526 aa12.86□□□□□ -0.35
Vps54-202ENSMUST00000109578 Kdm1aQ6ZQ88 853 aa12.86□□□□□ -0.35
Vps54-202ENSMUST00000109578 Tmem47Q9JJG6 181 aa12.86□□□□□ -0.35
Vps54-202ENSMUST00000109578 PfasQ5SUR0 1337 aa12.86□□□□□ -0.35
Vps54-202ENSMUST00000109578 Cdr2P97817 455 aa12.86□□□□□ -0.35
Vps54-202ENSMUST00000109578 ItgadQ3V0T4 1168 aa12.86□□□□□ -0.35
Vps54-202ENSMUST00000109578 Fxr1Q61584 677 aaKnown RBP12.86□□□□□ -0.35
Vps54-202ENSMUST00000109578 Secisbp2lQ6A098 1086 aaKnown RBP12.86□□□□□ -0.35
Vps54-202ENSMUST00000109578 Cabp7Q91ZM8 215 aa12.86□□□□□ -0.35
Vps54-202ENSMUST00000109578 Sar1bQ9CQC9 198 aa12.86□□□□□ -0.35
Vps54-202ENSMUST00000109578 Gm11983V9GXS8 105 aa12.86□□□□□ -0.35
Vps54-202ENSMUST00000109578 Gfpt1P47856 697 aa12.86□□□□□ -0.35
Vps54-202ENSMUST00000109578 Il15P48346 162 aa12.86□□□□□ -0.35
Vps54-202ENSMUST00000109578 Antxr2Q6DFX2 487 aa12.86□□□□□ -0.35
Vps54-202ENSMUST00000109578 Jade2Q6ZQF7 829 aa12.86□□□□□ -0.35
Vps54-202ENSMUST00000109578 Dlg1Q811D0 905 aaKnown RBP12.86□□□□□ -0.35
Vps54-202ENSMUST00000109578 Snrnp35Q9D384 244 aa12.86□□□□□ -0.35
Vps54-202ENSMUST00000109578 Etnk2A7MCT6 385 aa12.85□□□□□ -0.35
Vps54-202ENSMUST00000109578 Rpusd2Q149F1 553 aa12.85□□□□□ -0.35
Vps54-202ENSMUST00000109578 Cfap100Q80VN0 613 aa12.85□□□□□ -0.35
Vps54-202ENSMUST00000109578 CutaQ9CQ89 177 aa12.85□□□□□ -0.35
Vps54-202ENSMUST00000109578 Gm7356A0A087WSA6 508 aa12.85□□□□□ -0.35
Vps54-202ENSMUST00000109578 Stim1P70302 685 aa12.85□□□□□ -0.35
Vps54-202ENSMUST00000109578 Ssrp1Q08943 708 aaKnown RBP12.85□□□□□ -0.35
Vps54-202ENSMUST00000109578 Ccna1Q61456 421 aa12.85□□□□□ -0.35
Vps54-202ENSMUST00000109578 HrQ61645 1182 aa12.85□□□□□ -0.35
Vps54-202ENSMUST00000109578 Sema4bQ62179 823 aa12.85□□□□□ -0.35
Vps54-202ENSMUST00000109578 Slc9b1Q8C0X2 565 aa12.85□□□□□ -0.35
Vps54-202ENSMUST00000109578 Tfap4Q9JIZ5 338 aa12.85□□□□□ -0.35
Vps54-202ENSMUST00000109578 Psmd10Q9Z2X2 231 aa12.85□□□□□ -0.35
Vps54-202ENSMUST00000109578 Tbc1d2bQ3U0J8 965 aa12.85□□□□□ -0.35
Vps54-202ENSMUST00000109578 Tsr1Q5SWD9 803 aa12.85□□□□□ -0.35
Vps54-202ENSMUST00000109578 LRWD1Q8BUI3 648 aaKnown RBP12.85□□□□□ -0.35
Vps54-202ENSMUST00000109578 Trim9Q8C7M3 817 aa12.85□□□□□ -0.35
Vps54-202ENSMUST00000109578 Ybx3Q9JKB3 361 aaKnown RBP12.85□□□□□ -0.35
Vps54-202ENSMUST00000109578 Knop1Q9Z2Q2 478 aaKnown RBP12.85□□□□□ -0.35
Vps54-202ENSMUST00000109578 Psmd14O35593 310 aa12.85□□□□□ -0.35
Vps54-202ENSMUST00000109578 Znf667Q2TL60 609 aa12.85□□□□□ -0.35
Vps54-202ENSMUST00000109578 Znf280dQ68FE8 974 aa12.85□□□□□ -0.35
Vps54-202ENSMUST00000109578 Fhod1Q6P9Q4 1197 aa12.85□□□□□ -0.35
Vps54-202ENSMUST00000109578 Matr3Q8K310 846 aaKnown RBP12.85□□□□□ -0.35
Vps54-202ENSMUST00000109578 Gm3893E9Q1I1 302 aa12.84□□□□□ -0.35
Vps54-202ENSMUST00000109578 Prl2c2P04095 224 aa12.84□□□□□ -0.35
Vps54-202ENSMUST00000109578 Alppl2P24823 529 aa12.84□□□□□ -0.35
Vps54-202ENSMUST00000109578 Tubb2aQ7TMM9 445 aa12.84□□□□□ -0.35
Vps54-202ENSMUST00000109578 Leng8Q8CBY3 785 aaKnown RBP12.84□□□□□ -0.35
Vps54-202ENSMUST00000109578 Fbxo18Q8K2I9 1042 aa12.84□□□□□ -0.35
Vps54-202ENSMUST00000109578 Tubb2bQ9CWF2 445 aa12.84□□□□□ -0.35
Vps54-202ENSMUST00000109578 Lztfl1Q9JHQ5 299 aa12.84□□□□□ -0.35
Vps54-202ENSMUST00000109578 Gm30191A0A0U1RNT7 187 aa12.84□□□□□ -0.35
Vps54-202ENSMUST00000109578 NfixP70257 488 aa12.84□□□□□ -0.35
Vps54-202ENSMUST00000109578 Kcnb1Q03717 857 aa12.84□□□□□ -0.35
Vps54-202ENSMUST00000109578 Zfp781Q0P5U5 243 aa12.84□□□□□ -0.35
Vps54-202ENSMUST00000109578 Mcm7Q61881 719 aaKnown RBP12.84□□□□□ -0.35
Vps54-202ENSMUST00000109578 Gja3Q64448 417 aa12.84□□□□□ -0.35
Vps54-202ENSMUST00000109578 Bpifb6Q8BU51 449 aa12.84□□□□□ -0.35
Vps54-202ENSMUST00000109578 Ushbp1Q8R370 680 aa12.84□□□□□ -0.35
Vps54-202ENSMUST00000109578 Pabpc1lA2A5N3 607 aaKnown RBP12.84□□□□□ -0.35
Vps54-202ENSMUST00000109578 Ifnar1P33896 590 aa12.84□□□□□ -0.35
Vps54-202ENSMUST00000109578 Tmem35bQ3U0Y2 150 aa12.84□□□□□ -0.35
Vps54-202ENSMUST00000109578 ToporslQ9D2F8 683 aa12.84□□□□□ -0.35
Vps54-202ENSMUST00000109578 Cd274Q9EP73 290 aa12.84□□□□□ -0.35
Vps54-202ENSMUST00000109578 Zfp853A0A1D5RM95 733 aa12.83□□□□□ -0.36
Vps54-202ENSMUST00000109578 Fam186bD3Z420 943 aa12.83□□□□□ -0.36
Vps54-202ENSMUST00000109578 Man1a2P39098 641 aa12.83□□□□□ -0.36
Vps54-202ENSMUST00000109578 Skap2Q3UND0 358 aa12.83□□□□□ -0.36
Vps54-202ENSMUST00000109578 Ddx3yQ62095 658 aaKnown RBP12.83□□□□□ -0.36
Vps54-202ENSMUST00000109578 Pm20d1Q8C165 503 aa12.83□□□□□ -0.36
Vps54-202ENSMUST00000109578 Mtmr9Q9Z2D0 545 aa12.83□□□□□ -0.36
Vps54-202ENSMUST00000109578 SarsP26638 512 aaKnown RBP12.83□□□□□ -0.36
Vps54-202ENSMUST00000109578 Sec31aQ3UPL0 1230 aaKnown RBP12.83□□□□□ -0.36
Vps54-202ENSMUST00000109578 Ankrd13cQ3UX43 541 aa12.83□□□□□ -0.36
Vps54-202ENSMUST00000109578 Slc9a2Q3ZAS0 814 aa12.83□□□□□ -0.36
Vps54-202ENSMUST00000109578 Recql4Q75NR7 1216 aaKnown RBP12.83□□□□□ -0.36
Vps54-202ENSMUST00000109578 Nop9Q8BMC4 636 aaKnown RBP12.83□□□□□ -0.36
Vps54-202ENSMUST00000109578 Slc51aQ8R000 340 aa12.83□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 48.9 ms