RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Col6a1Q04857 1025 aa14.3□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Tmem63bQ3TWI9 832 aa14.3□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Limch1Q3UH68 1057 aa14.3□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 ErmnQ5EBJ4 281 aa14.3□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Churc1Q6DG52 112 aa14.3□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Cdc14aQ6GQT0 603 aa14.3□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Brd2Q7JJ13 798 aaKnown RBP14.3□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Stard7Q8R1R3 373 aa14.3□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Cog6Q8R3I3 657 aa14.3□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Lmcd1Q8VEE1 365 aa14.3□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Dbr1Q923B1 550 aa14.3□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 CenppQ9CZ92 286 aa14.3□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Ubiad1Q9DC60 336 aa14.3□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 DcxO88809 366 aa14.29□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 CatspereP0DP43 985 aa14.29□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Nr5a1P33242 462 aa14.29□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Mtx1P47802 317 aa14.29□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Rasip1Q3U0S6 961 aa14.29□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Ptger2Q62053 362 aa14.29□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Pgm5Q8BZF8 567 aa14.29□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Smoc2Q8CD91 447 aa14.29□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Rassf8Q8CJ96 419 aa14.29□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Bud13Q8R149 637 aa14.29□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Syt17Q920M7 470 aa14.29□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Kdm8Q9CXT6 414 aa14.29□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Serpinb3bQ9D1Q5 387 aa14.29□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Alg13Q9D8C3 1166 aaKnown RBP14.29□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 KnstrnQ9D9Z1 312 aaKnown RBP14.29□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Msgn1Q9JK54 188 aa14.29□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Sall1Q9ER74 1322 aa14.29□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Sbf2E9PXF8 1872 aa14.29□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Mia3Q8BI84 1930 aa14.29□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Gm30191A0A0U1RNT7 187 aa14.28□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Ugt1a5B2RT14 529 aa14.28□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Guca2bO09051 106 aa14.28□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Map7O88735 730 aa14.28□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Pdia3P27773 505 aaKnown RBP14.28□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Rbp3P49194 1234 aa14.28□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Cyp2c38P56655 490 aa14.28□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Adamts10P58459 1104 aa14.28□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Snap25P60879 206 aa14.28□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Trappc3lQ4KL14 181 aa14.28□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Cln3Q61124 438 aa14.28□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Ifit2Q64112 472 aa14.28□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Prmt6Q6NZB1 378 aa14.28□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Znf618Q80YY7 953 aaKnown RBP14.28□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Depdc1aQ8CIG0 804 aa14.28□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Oxnad1Q8VE38 311 aa14.28□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Cntnap2Q9CPW0 1332 aa14.28□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Cndp2Q9D1A2 475 aaKnown RBP14.28□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Clstn1Q9EPL2 979 aa14.28□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Inpp4aQ9EPW0 939 aa14.28□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Irx5Q9JKQ4 484 aa14.28□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Ifi202Q9R002 445 aa14.28□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Ak2Q9WTP6 239 aa14.28□□□□□ -0.12
Ccdc28b-202ENSMUST00000106035 Rbm8a2A0A0N4SUH6 174 aa14.27□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Ankrd35E9Q9D8 996 aa14.27□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Mx1P09922 631 aa14.27□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Neurl1bQ0MW30 546 aa14.27□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Mybpc2Q5XKE0 1136 aa14.27□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Clca4aQ6Q473 924 aa14.27□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Tdp1Q8BJ37 609 aa14.27□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Paf1Q8K2T8 535 aa14.27□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Rhobtb2Q91V93 728 aa14.27□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Rbm8aQ9CWZ3 174 aa14.27□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 NkapQ9D0F4 415 aaKnown RBP14.27□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Dnaaf5B9EJR8 853 aa14.26□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 GlrbP48168 496 aa14.26□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Pald1P70261 859 aa14.26□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 NfibP97863 570 aaKnown RBP14.26□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Fam109bQ14B98 259 aa14.26□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Palb2Q3U0P1 1104 aa14.26□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Esyt1Q3U7R1 1092 aaKnown RBP14.26□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Fbxo10Q7TQF2 950 aa14.26□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 PdgfcQ8CI19 345 aa14.26□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Mrpl58Q8R035 206 aa14.26□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Slc12a8Q8VI23 705 aa14.26□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 GneQ91WG8 722 aaKnown RBP14.26□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Pcdhgc5Q91XW9 944 aa14.26□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Odf2lQ9D478 642 aa14.26□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Azi2Q9QYP6 405 aa14.26□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Fem1bQ9Z2G0 627 aa14.26□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 C87977A2A958 498 aa14.25□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Adam15O88839 864 aa14.25□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Rps6P62754 249 aaKnown RBP14.25□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Siah1bQ06985 282 aa14.25□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Ccdc33Q3ULW6 985 aa14.25□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Prdm1Q60636 856 aa14.25□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Hps6Q8BLY7 805 aa14.25□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 NkrfQ8BY02 690 aaKnown RBP14.25□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Gimap7Q8R379 293 aa14.25□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Gpr108Q91WD0 569 aa14.25□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Map3k20Q9ESL4 802 aaKnown RBP14.25□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Nek4Q9Z1J2 792 aa14.25□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 JcadQ5DTX6 1320 aa14.24□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Myh8P13542 1937 aa14.24□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Cyp2d34L7N463 504 aa14.24□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Pde6aP27664 859 aa14.24□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Lilrb3P97484 841 aa14.24□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Parp3Q3ULW8 533 aa14.24□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 36 ms