RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Mcph1Q7TT79 822 aa7.83□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Aoc2Q812C9 757 aa7.83□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Tbc1d10bQ8BHL3 798 aa7.83□□□□□ -1.16
Bdnf-201ENSMUST00000053317 R3hcc1Q8BSI6 488 aa7.83□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Rnf208Q8K0W3 265 aa7.83□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Cep57l1Q8VDS7 400 aa7.83□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Tjap1Q9DCD5 539 aa7.83□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Igsf9bE9PZ19 1328 aa7.83□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Adgrg6Q6F3F9 1165 aa7.83□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Olfml1Q8BSH2 233 aa7.83□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Wasf1Q8R5H6 559 aa7.83□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Col4a5Q63ZW6 1691 aa7.83□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Megf6Q80V70 1572 aa7.82□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Znf609Q8BZ47 1413 aa7.82□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Sema3fO88632 785 aa7.82□□□□□ -1.16
Bdnf-201ENSMUST00000053317 EzrP26040 586 aaKnown RBP7.82□□□□□ -1.16
Bdnf-201ENSMUST00000053317 NfibP97863 570 aaKnown RBP7.82□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Wdr70Q3TWF6 657 aa7.82□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Nlrp2Q4PLS0 1046 aaKnown RBP7.82□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Prpf40bQ80W14 870 aa7.82□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Acat1Q8QZT1 424 aa7.82□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Terf2ipQ91VL8 393 aa7.82□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Nop2Q922K7 793 aaKnown RBP7.82□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Saal1Q9D2C2 474 aa7.82□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Tjp3Q9QXY1 905 aa7.82□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Frmpd3A0A140LIW3 1774 aa7.82□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Nf2P46662 596 aa7.82□□□□□ -1.16
Bdnf-201ENSMUST00000053317 LyarQ08288 388 aaKnown RBP7.82□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Ccdc66Q6NS45 935 aa7.82□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Supt20hQ7TT00 530 aaKnown RBP7.82□□□□□ -1.16
Bdnf-201ENSMUST00000053317 CnstQ8CBC4 711 aa7.82□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Hnrnpul1Q8VDM6 859 aaKnown RBP7.82□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Ccnt1Q9QWV9 724 aaKnown RBP7.82□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Ppp1r9aH3BJD6 1292 aa7.82□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Gna11P21278 359 aa7.82□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Sox10Q04888 466 aa7.82□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Eif3j2Q66JS6 263 aa7.82□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Nat10Q8K224 1024 aaKnown RBP7.82□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Vmn1r191Q8K4D0 298 aa7.82□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Vps16Q920Q4 839 aa7.82□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Tubb6Q922F4 447 aa7.82□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Dmrtc1Q9D9R7 182 aa7.82□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Nsrp1Q5NCR9 542 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Znf653Q6YND2 615 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Oxnad1Q8VE38 311 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Srgap1Q91Z69 1062 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Bap1Q99PU7 728 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Cdc45Q9Z1X9 566 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Gm20425E9Q035 978 aaKnown RBP7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 CatspereP0DP43 985 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Ms4a2P20490 235 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 SrprbP47758 269 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Cdkn1cP49919 348 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Gse1Q3U3C9 1213 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Utp18Q5SSI6 552 aaKnown RBP7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Nap1l3Q794H2 544 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Trnp1Q80ZI1 223 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Bbs9Q811G0 885 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Stk39Q9Z1W9 556 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Rps6P62754 249 aaKnown RBP7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Rhpn1Q61085 643 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Mns1Q61884 491 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Isy1Q69ZQ2 285 aaKnown RBP7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Churc1Q6DG52 112 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Clca4aQ6Q473 924 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Tcaf3Q6QR59 914 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Kif1bpQ6ZPU9 617 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Mrps27Q8BK72 415 aaKnown RBP7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Appl2Q8K3G9 662 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Ndufb9Q9CQJ8 179 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Iqca1Q9CUL5 857 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Mrpl44Q9CY73 333 aaKnown RBP7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 StrcQ8VIM6 1809 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Pnpla6Q3TRM4 1355 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 NesQ6P5H2 1864 aaKnown RBP7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 GclcP97494 637 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 PrkczQ02956 592 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Trmt1Q3TX08 663 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 MaeaQ4VC33 396 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Samhd1Q60710 627 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Fndc3bQ6NWW9 1207 aaKnown RBP7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Krt9Q6RHW0 743 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 C2cd5Q7TPS5 1016 aaKnown RBP7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Znf618Q80YY7 953 aaKnown RBP7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Nod2Q8K3Z0 1020 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Stk38Q91VJ4 465 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Vta1Q9CR26 309 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 NapaQ9DB05 295 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Cyp27a1Q9DBG1 533 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Ralgps2Q9ERD6 590 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Gdpd2Q9ESM6 539 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Nlrp5Q9R1M5 1163 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Zbtb22Q9Z0G7 638 aa7.81□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Arap2Q8BZ05 1703 aa7.8□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Gm42688A0A0R3P9D1 673 aa7.8□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Prom1O54990 867 aa7.8□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Rbp3P49194 1234 aa7.8□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Cyp2c37P56654 490 aa7.8□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Zfp943Q6NZP4 507 aa7.8□□□□□ -1.16
Bdnf-201ENSMUST00000053317 Cyp2c54Q6XVG2 490 aa7.8□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 23.3 ms