RNA–Protein interactions for RNA: ENSMUST00000050178.12

Ccdc60-201, Transcript of Coiled-coil domain-containing protein 60, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc60, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-201ENSMUST00000050178 CrebrfQ8CDG5 640 aaKnown RBP9□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 FignQ9ERZ6 759 aa9□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Gm4307E9PZY4 289 aa9□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Gm4312K9J7E2 289 aa9□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Lmnb1P14733 588 aaKnown RBP9□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Cdc25aP48964 514 aa9□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Glra4Q61603 456 aa9□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 WaplQ65Z40 1200 aaKnown RBP9□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Tacc1Q6Y685 774 aa9□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Clic6Q8BHB9 596 aa9□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Mei4Q8BRM6 389 aa9□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Rbm5Q91YE7 815 aaKnown RBP9□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Thap2Q9D305 217 aa9□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Snrnp35Q9D384 244 aa9□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Ly6iQ9WU67 134 aa9□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Mtmr2Q9Z2D1 643 aa9□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Krt78E9Q0F0 1068 aa9□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Abl1P00520 1123 aa9□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Sox5P35710 763 aa9□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Sdc2P43407 202 aa9□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Hoxc13P50207 328 aa9□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Jdp2P97875 163 aa9□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Tbc1d2bQ3U0J8 965 aa9□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Trim9Q8C7M3 817 aa9□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Brd3Q8K2F0 726 aaKnown RBP9□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Stap2Q8R0L1 411 aa9□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Arhgef25Q9CWR0 618 aa9□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Klhl40Q9D783 621 aa9□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Nlrp5Q9R1M5 1163 aa9□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Lypla2Q9WTL7 231 aa9□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 GsdmeQ9Z2D3 512 aa9□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Pdia4P08003 638 aaKnown RBP8.99□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Csf1rP09581 977 aa8.99□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Chrna5Q2MKA5 467 aa8.99□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Ccdc172Q810N9 267 aa8.99□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Ushbp1Q8R370 680 aa8.99□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 F11Q91Y47 624 aa8.99□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Golgb1E9PVZ8 3238 aa8.99□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Flvcr1B2RXV4 560 aa8.99□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Lrrc55Q3UY51 311 aa8.99□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Nxf2Q4ZGD8 691 aa8.99□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Rhbdf1Q6PIX5 856 aa8.99□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 PodnQ7TQ62 611 aa8.99□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Cracr2bQ80ZJ8 394 aa8.99□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Sgip1Q8VD37 806 aa8.99□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Vps16Q920Q4 839 aa8.99□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Kif23E9Q5G3 953 aa8.98□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Ugt1a6bK9J7B2 531 aa8.98□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 AgtP11859 477 aa8.98□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Samsn1P57725 372 aa8.98□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Meis2P97367 477 aa8.98□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Ift88Q61371 824 aa8.98□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Ugt1a6Q64435 531 aa8.98□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Ugt1a7cQ6ZQM8 531 aa8.98□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Scfd1Q8BRF7 639 aaKnown RBP8.98□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Q8BT18 775 aa8.98□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Q8C5C9 218 aa8.98□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Kctd10Q922M3 315 aa8.98□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Rai14Q9EP71 979 aaKnown RBP8.98□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Slc39a2G3X943 309 aa8.98□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 MthfslL7N466 203 aa8.98□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Mpp3O88910 568 aa8.98□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Ces3aQ63880 571 aa8.98□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Dusp9Q7TNL7 452 aa8.98□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Klhl30Q8C3F7 581 aa8.98□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 GlyctkQ8QZY2 523 aa8.98□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Trim29Q8R2Q0 587 aa8.98□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 OscarQ8VBT3 265 aa8.98□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Ces3bQ8VCU1 571 aa8.98□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Dnajc7Q9QYI3 494 aa8.98□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Hnrnph3D3Z3N4 346 aaKnown RBP8.98□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Usp5P56399 858 aaKnown RBP8.98□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Dok7Q18PE0 504 aa8.98□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Tmem35bQ3U0Y2 150 aa8.98□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 WhrnQ80VW5 918 aa8.98□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Mrps25Q9D125 171 aaKnown RBP8.98□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Cmtr1Q9DBC3 837 aa8.98□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Ces1aE9PYP1 563 aa8.97□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Barx2O08686 283 aa8.97□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Cep135Q6P5D4 1140 aa8.97□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Cdan1Q8CC12 1239 aa8.97□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Cdk17Q8K0D0 523 aa8.97□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Tmem134Q8R0J4 195 aa8.97□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Pcdha12Q91Y18 950 aa8.97□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Tmem192Q9CXT7 266 aa8.97□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Mfap3lQ9D3X9 409 aa8.97□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Ubiad1Q9DC60 336 aa8.97□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 XdhQ00519 1335 aa8.97□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Cfap70D3YVL2 1141 aa8.97□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Fgfr2P21803 821 aa8.97□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Arhgef2Q60875 985 aa8.97□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Nap1l4Q78ZA7 375 aaKnown RBP8.97□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Dpp8Q80YA7 892 aa8.97□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Igdcc3Q8BQC3 813 aa8.97□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Morc2bQ8C5W4 1022 aa8.97□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Tmem63cQ8CBX0 802 aa8.97□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Depdc1aQ8CIG0 804 aa8.97□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 MyripQ8K3I4 856 aa8.97□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Kdm4bQ91VY5 1086 aa8.97□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Krt34Q9D646 392 aa8.97□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 15.4 ms