RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Nfu1Q9QZ23 255 aa12.55□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Mroh9G5E8L9 891 aa12.55□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Gbp4Q61107 620 aa12.55□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Shisa4Q8CA71 197 aa12.55□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Sox30Q8CGW4 782 aa12.55□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Sash3Q8K352 380 aa12.55□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Apobec3Q99J72 440 aaKnown RBP12.55□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Fam173bQ9D1Z3 247 aa12.55□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Gm11983V9GXS8 105 aa12.55□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Hnrnph1O35737 449 aaKnown RBP12.55□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Map2k1P31938 393 aa12.55□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Mnat1P51949 309 aa12.55□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Jmjd4Q8BFT6 427 aa12.55□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Gga3Q8BMI3 718 aa12.55□□□□□ -0.4
Topbp1-201ENSMUST00000035164 UvssaQ9D479 717 aa12.55□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Naaladl2A0A0N4SUJ3 795 aa12.54□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Pola2P33611 600 aa12.54□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Card10P58660 1021 aa12.54□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Exoc3Q6KAR6 755 aa12.54□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Ggt6Q6PDE7 497 aa12.54□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Arfgap2Q99K28 520 aa12.54□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Krt71Q9R0H5 524 aa12.54□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Clip2Q9Z0H8 1047 aa12.54□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Casp12O08736 419 aa12.54□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Cyp19a1P28649 503 aa12.54□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Plbd2Q3TCN2 594 aa12.54□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Ice2Q3UZ18 988 aaKnown RBP12.54□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Iffo1Q8BXL9 562 aa12.54□□□□□ -0.4
Topbp1-201ENSMUST00000035164 MtrrQ8C1A3 696 aa12.54□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Lsm14bQ8CGC4 385 aaKnown RBP12.54□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Eif6O55135 245 aa12.54□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Tnnc1P19123 161 aa12.54□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Wnt7aP24383 349 aa12.54□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Slc30a9Q5IRJ6 567 aa12.54□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Anks6Q6GQX6 883 aa12.54□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Gm382B1AXN3 1250 aa12.54□□□□□ -0.4
Topbp1-201ENSMUST00000035164 GpiP06745 558 aaKnown RBP12.54□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Stim2P83093 746 aa12.54□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Tlr11Q6R5P0 926 aa12.54□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Zbtb1Q91VL9 713 aa12.54□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Atp6v0a4Q920R6 833 aa12.54□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Gm43738A0A0G2JEA5 862 aa12.53□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Cul4bA2A432 970 aaKnown RBP12.53□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Cpsf2O35218 782 aaKnown RBP12.53□□□□□ -0.4
Topbp1-201ENSMUST00000035164 MycnP03966 462 aaKnown RBP12.53□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Calm1P0DP26 149 aaKnown RBP12.53□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Calm2P0DP27 149 aaKnown RBP12.53□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Calm3P0DP28 149 aaKnown RBP12.53□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Agbl1Q09M05 972 aa12.53□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Arhgap44Q5SSM3 814 aa12.53□□□□□ -0.4
Topbp1-201ENSMUST00000035164 PnocQ64387 187 aa12.53□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Slc35f6Q8VE96 372 aa12.53□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Golph3Q9CRA5 298 aa12.53□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Ncf2O70145 525 aa12.53□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Ap1m1P35585 423 aa12.53□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Kdm7aQ3UWM4 940 aa12.53□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Oxr1Q4KMM3 866 aa12.53□□□□□ -0.4
Topbp1-201ENSMUST00000035164 GypcQ78HU7 95 aa12.53□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Aggf1Q7TN31 711 aa12.53□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Kirrel3Q8BR86 778 aa12.53□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Pwp2Q8BU03 919 aaKnown RBP12.53□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Cacnb1Q8R3Z5 597 aa12.53□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Creb3l3Q91XE9 479 aa12.53□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Gm4340L7N2C4 268 aa12.53□□□□□ -0.4
Topbp1-201ENSMUST00000035164 AdkP55264 361 aa12.53□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Zmym1Q3TJB1 983 aa12.53□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Dcaf17Q3TUL7 519 aa12.53□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Spats2Q8K1N4 545 aaKnown RBP12.53□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Tmem134Q8R0J4 195 aa12.53□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Slc14a2Q8R4T9 930 aa12.53□□□□□ -0.4
Topbp1-201ENSMUST00000035164 NenfQ9CQ45 171 aa12.53□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Mis12Q9CY25 206 aa12.53□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Mapk6Q61532 720 aa12.53□□□□□ -0.4
Topbp1-201ENSMUST00000035164 ZyxQ62523 564 aa12.53□□□□□ -0.4
Topbp1-201ENSMUST00000035164 NfrkbQ6PIJ4 1296 aaKnown RBP12.53□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Cct8l1Q80YT3 562 aa12.53□□□□□ -0.4
Topbp1-201ENSMUST00000035164 VmacQ8BP01 174 aa12.53□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Col20a1Q923P0 1320 aa12.52□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Gm5134E9QAB5 671 aa12.52□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Hnrnph2P70333 449 aaKnown RBP12.52□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Sox13Q04891 613 aa12.52□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Gm5935Q497S0 212 aa12.52□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Fkbp3Q62446 224 aaKnown RBP12.52□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Phf8Q80TJ7 1023 aa12.52□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Rasal3Q8C2K5 1041 aa12.52□□□□□ -0.4
Topbp1-201ENSMUST00000035164 1700020D05RikQ99PB1 294 aa12.52□□□□□ -0.4
Topbp1-201ENSMUST00000035164 ToporslQ9D2F8 683 aa12.52□□□□□ -0.4
Topbp1-201ENSMUST00000035164 IkQ9Z1M8 557 aaKnown RBP12.52□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Wdr19Q3UGF1 1341 aa12.52□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Olfr118Q7TRJ6 321 aa12.52□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Dhx58Q99J87 678 aa12.52□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Nr2e3Q9QXZ7 395 aa12.52□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Sall1Q9ER74 1322 aa12.52□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Bpifb4A2BGH0 617 aa12.52□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Rps6ka1P18653 724 aa12.52□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Rnf207Q3V3A7 635 aa12.52□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Foxn3Q499D0 457 aa12.52□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Hirip3Q8BLH7 601 aa12.52□□□□□ -0.41
Topbp1-201ENSMUST00000035164 QarsQ8BML9 775 aa12.52□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Gramd4Q8CB44 633 aa12.52□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 19.7 ms