RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Arhgef2Q60875 985 aa16.87■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 RbsnQ80Y56 783 aa16.87■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Afg3l2Q8JZQ2 802 aaKnown RBP16.87■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Arhgef6Q8K4I3 771 aa16.87■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Ushbp1Q8R370 680 aa16.87■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Lzts2Q91YU6 671 aa16.87■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 EhhadhQ9DBM2 718 aa16.87■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Zscan18E9PUD6 809 aa16.87■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Vmn2r71L7N2D8 855 aa16.87■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Kdm1aQ6ZQ88 853 aa16.87■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Apopt1Q9CQW7 192 aa16.87■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Alpk1Q9CXB8 1231 aa16.87■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Gm3409A0A0G2JE67 319 aa16.87■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Cyb5rlB1AS42 316 aa16.87■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Gm28042B7ZCM9 1014 aa16.87■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Trmt44Q9D2Q2 713 aa16.87■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Git2Q9JLQ2 708 aa16.87■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Sorbs3Q9R1Z8 733 aa16.87■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 A430078G23RikE9Q7Y4 484 aa16.86■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Cep112Q5PR68 954 aa16.86■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Rhpn1Q61085 643 aa16.86■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Asic1Q6NXK8 526 aa16.86■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Trim9Q8C7M3 817 aa16.86■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Bicdl2Q8CHW5 507 aa16.86■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Spata4Q8K3V1 295 aa16.86■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Smc1bQ920F6 1248 aa16.86■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Pkd2l2Q9JLG4 621 aa16.86■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Phrf1A6H619 1682 aa16.86■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Gm7356A0A087WSA6 508 aa16.86■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Gm10378F6XQQ1 160 aa16.86■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Emc10Q3TAS6 258 aa16.86■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Foxn3Q499D0 457 aa16.86■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 MtrrQ8C1A3 696 aa16.86■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Tmem39aQ9CYC3 486 aa16.86■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Jag1Q9QXX0 1218 aa16.86■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 ByslO54825 436 aaKnown RBP16.85■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Pth1rP41593 591 aa16.85■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Grm4Q68EF4 912 aa16.85■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Fez2Q6TYB5 348 aa16.85■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Map3k11Q80XI6 850 aa16.85■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 GlyctkQ8QZY2 523 aa16.85■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Trmt112Q9DCG9 125 aa16.85■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Rbm6S4R1W5 1118 aaKnown RBP16.85■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 PfasQ5SUR0 1337 aa16.85■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Gna11P21278 359 aa16.85■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Tnni3kQ5GIG6 834 aa16.85■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Ankrd13aQ80UP5 588 aa16.85■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Ttc26Q8BS45 554 aa16.85■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Cep95Q8BVV7 827 aa16.85■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Phc3Q8CHP6 981 aa16.85■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Sema3fO88632 785 aa16.85■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Ssrp1Q08943 708 aaKnown RBP16.85■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 AdpgkQ8VDL4 496 aa16.85■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 CutaQ9CQ89 177 aa16.85■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Cd274Q9EP73 290 aa16.85■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Dnajc7Q9QYI3 494 aa16.85■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 AsnsQ61024 561 aa16.84■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Epc1Q8C9X6 813 aa16.84■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Smc1aQ9CU62 1233 aaKnown RBP16.84■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Tpcn1Q9EQJ0 817 aa16.84■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Arhgap33Q80YF9 1305 aa16.84■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Chd5A2A8L1 1946 aa16.84■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Tmed8Q3UHI4 326 aa16.84■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Strip1Q8C079 837 aa16.84■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Znf131Q8K3J5 619 aa16.84■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Akap8Q9DBR0 687 aaKnown RBP16.84■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Ltbp2O08999 1813 aa16.84■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Grem2O88273 168 aa16.83■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 LbrQ3U9G9 626 aaKnown RBP16.83■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Lrrn2Q6PHP6 730 aa16.83■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Tubb2aQ7TMM9 445 aa16.83■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Tubb2bQ9CWF2 445 aa16.83■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 TbcbQ9D1E6 244 aa16.83■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 LdhaP06151 332 aaKnown RBP16.83■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 Nol4P60954 483 aa16.83■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 Fkbp3Q62446 224 aaKnown RBP16.83■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 Pabpc4Q6PHQ9 660 aaKnown RBP16.83■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 Phf20l1Q8CCJ9 1013 aa16.83■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 Efhd1Q9D4J1 240 aa16.83■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 Eif2ak3Q9Z2B5 1114 aa16.83■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 Prl2c3P04768 224 aa16.83■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 Psg29Q3URN6 468 aa16.83■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 Slc9a2Q3ZAS0 814 aa16.83■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 Cct6bQ61390 531 aa16.83■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 Hpcal4Q8BGZ1 191 aa16.83■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 Sash3Q8K352 380 aa16.83■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 Syce1Q9D495 329 aa16.83■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 Bpifb4A2BGH0 617 aa16.82■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 Eif6O55135 245 aa16.82■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 Meis3P97368 378 aa16.82■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 Lilrb3P97484 841 aa16.82■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 Gcnt1Q09324 428 aa16.82■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 Fam178bQ24JP3 464 aa16.82■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 Lrrfip1Q3UZ39 729 aaKnown RBP16.82■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 Jakmip3Q5DTN8 844 aa16.82■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 DaglaQ6WQJ1 1044 aa16.82■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 Jade2Q6ZQF7 829 aa16.82■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 Psd3Q2PFD7 1037 aa16.82■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 Tmem35bQ3U0Y2 150 aa16.82■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 Rbm26Q6NZN0 1012 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 261.2 ms