RNA–Protein interactions for RNA: ENSMUST00000022623.12

Trim35-201, Transcript of Tripartite motif-containing protein 35, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim35, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35-201ENSMUST00000022623 Krt79Q8VED5 531 aa13.2□□□□□ -0.3
Trim35-201ENSMUST00000022623 Arl8aQ8VEH3 186 aa13.2□□□□□ -0.3
Trim35-201ENSMUST00000022623 Mis18aQ9CZJ6 204 aa13.2□□□□□ -0.3
Trim35-201ENSMUST00000022623 Thap2Q9D305 217 aa13.2□□□□□ -0.3
Trim35-201ENSMUST00000022623 Snrnp35Q9D384 244 aa13.2□□□□□ -0.3
Trim35-201ENSMUST00000022623 Mast2Q60592 1734 aa13.2□□□□□ -0.3
Trim35-201ENSMUST00000022623 Csf1rP09581 977 aa13.2□□□□□ -0.3
Trim35-201ENSMUST00000022623 Prr7Q3V0I2 269 aa13.2□□□□□ -0.3
Trim35-201ENSMUST00000022623 Tbc1d9bQ5SVR0 1263 aa13.2□□□□□ -0.3
Trim35-201ENSMUST00000022623 Hdac4Q6NZM9 1076 aa13.2□□□□□ -0.3
Trim35-201ENSMUST00000022623 Ube2oQ6ZPJ3 1288 aa13.2□□□□□ -0.3
Trim35-201ENSMUST00000022623 Kdm1aQ6ZQ88 853 aa13.2□□□□□ -0.3
Trim35-201ENSMUST00000022623 Pdzph1Q8BGR1 1238 aa13.2□□□□□ -0.3
Trim35-201ENSMUST00000022623 IarsQ8BU30 1262 aa13.2□□□□□ -0.3
Trim35-201ENSMUST00000022623 Cul5Q9D5V5 780 aa13.2□□□□□ -0.3
Trim35-201ENSMUST00000022623 Tulp1Q9Z273 543 aa13.2□□□□□ -0.3
Trim35-201ENSMUST00000022623 Myh4Q5SX39 1939 aa13.19□□□□□ -0.3
Trim35-201ENSMUST00000022623 Gm45140A0A0N4SUM8 220 aa13.19□□□□□ -0.3
Trim35-201ENSMUST00000022623 Klhl34A2AI76 644 aa13.19□□□□□ -0.3
Trim35-201ENSMUST00000022623 Tex13cD3YU32 604 aa13.19□□□□□ -0.3
Trim35-201ENSMUST00000022623 TbcbQ9D1E6 244 aa13.19□□□□□ -0.3
Trim35-201ENSMUST00000022623 Sertad1Q9JL10 236 aa13.19□□□□□ -0.3
Trim35-201ENSMUST00000022623 Knop1Q9Z2Q2 478 aaKnown RBP13.19□□□□□ -0.3
Trim35-201ENSMUST00000022623 Cacna1sQ02789 1880 aa13.19□□□□□ -0.3
Trim35-201ENSMUST00000022623 Nek1P51954 1203 aa13.19□□□□□ -0.3
Trim35-201ENSMUST00000022623 Lrrfip1Q3UZ39 729 aaKnown RBP13.19□□□□□ -0.3
Trim35-201ENSMUST00000022623 Hoxa13Q62424 386 aa13.19□□□□□ -0.3
Trim35-201ENSMUST00000022623 GypcQ78HU7 95 aa13.19□□□□□ -0.3
Trim35-201ENSMUST00000022623 Tmx4Q8C0L0 335 aa13.19□□□□□ -0.3
Trim35-201ENSMUST00000022623 Ppp1r11Q8K1L5 131 aa13.19□□□□□ -0.3
Trim35-201ENSMUST00000022623 Ciapin1Q8WTY4 309 aa13.19□□□□□ -0.3
Trim35-201ENSMUST00000022623 Pcdha7Q91Y13 937 aa13.19□□□□□ -0.3
Trim35-201ENSMUST00000022623 Nr1i2O54915 431 aa13.19□□□□□ -0.3
Trim35-201ENSMUST00000022623 Prkg1P0C605 671 aa13.19□□□□□ -0.3
Trim35-201ENSMUST00000022623 Pcif1P59114 706 aa13.19□□□□□ -0.3
Trim35-201ENSMUST00000022623 Uri1Q3TLD5 531 aa13.19□□□□□ -0.3
Trim35-201ENSMUST00000022623 LRWD1Q8BUI3 648 aaKnown RBP13.19□□□□□ -0.3
Trim35-201ENSMUST00000022623 Brd3Q8K2F0 726 aaKnown RBP13.19□□□□□ -0.3
Trim35-201ENSMUST00000022623 Ppp2r5dQ91V89 594 aa13.19□□□□□ -0.3
Trim35-201ENSMUST00000022623 Gm38392E9Q2A2 434 aa13.18□□□□□ -0.3
Trim35-201ENSMUST00000022623 Pagr1bF6V0H0 108 aa13.18□□□□□ -0.3
Trim35-201ENSMUST00000022623 SpidrQ8BGX7 933 aa13.18□□□□□ -0.3
Trim35-201ENSMUST00000022623 Trerf1Q8BXJ2 1205 aa13.18□□□□□ -0.3
Trim35-201ENSMUST00000022623 Lrrc41Q8K1C9 807 aa13.18□□□□□ -0.3
Trim35-201ENSMUST00000022623 Pagr1aQ99L02 253 aa13.18□□□□□ -0.3
Trim35-201ENSMUST00000022623 Abcb6Q9DC29 842 aa13.18□□□□□ -0.3
Trim35-201ENSMUST00000022623 TfrcQ62351 763 aaKnown RBP13.18□□□□□ -0.3
Trim35-201ENSMUST00000022623 Fam193aQ8CGI1 1231 aaKnown RBP13.18□□□□□ -0.3
Trim35-201ENSMUST00000022623 Paxbp1P58501 919 aa13.18□□□□□ -0.3
Trim35-201ENSMUST00000022623 Mcm6P97311 821 aa13.18□□□□□ -0.3
Trim35-201ENSMUST00000022623 Enox1Q8BHR2 643 aaKnown RBP13.18□□□□□ -0.3
Trim35-201ENSMUST00000022623 Cc2d1bQ8BRN9 848 aa13.18□□□□□ -0.3
Trim35-201ENSMUST00000022623 Ccdc12Q8R344 166 aaKnown RBP13.18□□□□□ -0.3
Trim35-201ENSMUST00000022623 Psmd10Q9Z2X2 231 aa13.18□□□□□ -0.3
Trim35-201ENSMUST00000022623 Slc7a1Q09143 622 aa13.17□□□□□ -0.3
Trim35-201ENSMUST00000022623 Krt87Q6IMF0 495 aa13.17□□□□□ -0.3
Trim35-201ENSMUST00000022623 Col23a1Q8K4G2 532 aa13.17□□□□□ -0.3
Trim35-201ENSMUST00000022623 Arhgef6Q8K4I3 771 aa13.17□□□□□ -0.3
Trim35-201ENSMUST00000022623 Rbm6S4R1W5 1118 aaKnown RBP13.17□□□□□ -0.3
Trim35-201ENSMUST00000022623 Abca3Q8R420 1704 aa13.17□□□□□ -0.3
Trim35-201ENSMUST00000022623 Gm5934D3Z4U6 212 aa13.17□□□□□ -0.3
Trim35-201ENSMUST00000022623 Abcb4P21440 1276 aa13.17□□□□□ -0.3
Trim35-201ENSMUST00000022623 Tal1P22091 329 aa13.17□□□□□ -0.3
Trim35-201ENSMUST00000022623 Rab11fip4Q8BQP8 635 aa13.17□□□□□ -0.3
Trim35-201ENSMUST00000022623 Riox2Q8CD15 465 aa13.17□□□□□ -0.3
Trim35-201ENSMUST00000022623 Spire2Q8K1S6 718 aa13.17□□□□□ -0.3
Trim35-201ENSMUST00000022623 Slc18a1Q8R090 521 aa13.17□□□□□ -0.3
Trim35-201ENSMUST00000022623 Plekhg6Q8R0J1 787 aa13.17□□□□□ -0.3
Trim35-201ENSMUST00000022623 Bst2Q8R2Q8 172 aa13.17□□□□□ -0.3
Trim35-201ENSMUST00000022623 CsadQ9DBE0 493 aa13.17□□□□□ -0.3
Trim35-201ENSMUST00000022623 Ankrd35E9Q9D8 996 aa13.17□□□□□ -0.3
Trim35-201ENSMUST00000022623 Map2k1P31938 393 aa13.17□□□□□ -0.3
Trim35-201ENSMUST00000022623 Anp32eP97822 260 aaKnown RBP13.17□□□□□ -0.3
Trim35-201ENSMUST00000022623 Scaf8Q6DID3 1268 aa13.17□□□□□ -0.3
Trim35-201ENSMUST00000022623 Fer1l6E0CZ42 1862 aa13.16□□□□□ -0.3
Trim35-201ENSMUST00000022623 Flvcr1B2RXV4 560 aa13.16□□□□□ -0.3
Trim35-201ENSMUST00000022623 Rsbn1lD3Z0K6 821 aa13.16□□□□□ -0.3
Trim35-201ENSMUST00000022623 Adssl1P28650 457 aa13.16□□□□□ -0.3
Trim35-201ENSMUST00000022623 Slc2a13Q3UHK1 637 aa13.16□□□□□ -0.3
Trim35-201ENSMUST00000022623 Ezh2Q61188 746 aaKnown RBP13.16□□□□□ -0.3
Trim35-201ENSMUST00000022623 Ccna1Q61456 421 aa13.16□□□□□ -0.3
Trim35-201ENSMUST00000022623 Cpb1B2RS76 415 aa13.16□□□□□ -0.3
Trim35-201ENSMUST00000022623 Dnaaf5B9EJR8 853 aa13.16□□□□□ -0.3
Trim35-201ENSMUST00000022623 Ddx23D3Z0M9 819 aaKnown RBP13.16□□□□□ -0.3
Trim35-201ENSMUST00000022623 Dync1i1O88485 628 aa13.16□□□□□ -0.3
Trim35-201ENSMUST00000022623 Bend4P86174 541 aa13.16□□□□□ -0.3
Trim35-201ENSMUST00000022623 Ap5z1Q3U829 807 aa13.16□□□□□ -0.3
Trim35-201ENSMUST00000022623 Tnni3kQ5GIG6 834 aa13.16□□□□□ -0.3
Trim35-201ENSMUST00000022623 Best3Q6H1V1 669 aa13.16□□□□□ -0.3
Trim35-201ENSMUST00000022623 Sval3Q76I99 144 aa13.16□□□□□ -0.3
Trim35-201ENSMUST00000022623 Dlg1Q811D0 905 aaKnown RBP13.16□□□□□ -0.3
Trim35-201ENSMUST00000022623 Slc13a4Q8BZ82 625 aa13.16□□□□□ -0.3
Trim35-201ENSMUST00000022623 Mfap3Q922T2 349 aa13.16□□□□□ -0.3
Trim35-201ENSMUST00000022623 Nap1l5Q9JJF0 156 aa13.16□□□□□ -0.3
Trim35-201ENSMUST00000022623 Pnpla6Q3TRM4 1355 aa13.16□□□□□ -0.3
Trim35-201ENSMUST00000022623 Atp8b5A3FIN4 1183 aa13.16□□□□□ -0.3
Trim35-201ENSMUST00000022623 Mboat4P0C7A3 435 aa13.16□□□□□ -0.3
Trim35-201ENSMUST00000022623 Nedd4P46935 887 aaKnown RBP13.16□□□□□ -0.3
Trim35-201ENSMUST00000022623 PsdQ5DTT2 1024 aa13.16□□□□□ -0.3
Trim35-201ENSMUST00000022623 Meis1Q60954 390 aa13.16□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 53.9 ms