RNA–Protein interactions for RNA: ENSMUST00000020258.9

Herc4-201, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Herc4, Length 3,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-201ENSMUST00000020258 Ginm1Q91WR6 327 aa12.78□□□□□ -0.36
Herc4-201ENSMUST00000020258 HibadhQ99L13 335 aaKnown RBP12.78□□□□□ -0.36
Herc4-201ENSMUST00000020258 RtcbQ99LF4 505 aaKnown RBP12.78□□□□□ -0.36
Herc4-201ENSMUST00000020258 Ftl1P29391 183 aa12.77□□□□□ -0.36
Herc4-201ENSMUST00000020258 Foxn3Q499D0 457 aa12.77□□□□□ -0.36
Herc4-201ENSMUST00000020258 Large2Q5XPT3 690 aa12.77□□□□□ -0.36
Herc4-201ENSMUST00000020258 Commd10Q8JZY2 202 aa12.77□□□□□ -0.36
Herc4-201ENSMUST00000020258 Lgr5Q9Z1P4 907 aa12.77□□□□□ -0.36
Herc4-201ENSMUST00000020258 Myo3bQ1EG27 1305 aa12.77□□□□□ -0.36
Herc4-201ENSMUST00000020258 Gm13023A2A8N2 498 aa12.77□□□□□ -0.37
Herc4-201ENSMUST00000020258 Apol6B7ZC55 329 aa12.77□□□□□ -0.37
Herc4-201ENSMUST00000020258 Ankrd35E9Q9D8 996 aa12.77□□□□□ -0.37
Herc4-201ENSMUST00000020258 Ppef2O35385 757 aa12.77□□□□□ -0.37
Herc4-201ENSMUST00000020258 Nkx2-5P42582 318 aa12.77□□□□□ -0.37
Herc4-201ENSMUST00000020258 Cacnb3P54285 484 aa12.77□□□□□ -0.37
Herc4-201ENSMUST00000020258 MaeaQ4VC33 396 aa12.77□□□□□ -0.37
Herc4-201ENSMUST00000020258 Tsg101Q61187 391 aa12.77□□□□□ -0.37
Herc4-201ENSMUST00000020258 Arid3aQ62431 601 aa12.77□□□□□ -0.37
Herc4-201ENSMUST00000020258 Hdac4Q6NZM9 1076 aa12.77□□□□□ -0.37
Herc4-201ENSMUST00000020258 RalylQ8BTF8 293 aa12.77□□□□□ -0.37
Herc4-201ENSMUST00000020258 Cdan1Q8CC12 1239 aa12.77□□□□□ -0.37
Herc4-201ENSMUST00000020258 Phf20l1Q8CCJ9 1013 aa12.77□□□□□ -0.37
Herc4-201ENSMUST00000020258 Apopt1Q9CQW7 192 aa12.77□□□□□ -0.37
Herc4-201ENSMUST00000020258 Snrnp35Q9D384 244 aa12.77□□□□□ -0.37
Herc4-201ENSMUST00000020258 Gtf2iQ9ESZ8 998 aaKnown RBP12.77□□□□□ -0.37
Herc4-201ENSMUST00000020258 Tacc2Q9JJG0 1149 aa12.77□□□□□ -0.37
Herc4-201ENSMUST00000020258 Sec23aQ01405 765 aa12.77□□□□□ -0.37
Herc4-201ENSMUST00000020258 Slc2a13Q3UHK1 637 aa12.77□□□□□ -0.37
Herc4-201ENSMUST00000020258 Herc4Q6PAV2 1057 aa12.77□□□□□ -0.37
Herc4-201ENSMUST00000020258 Krt222Q8CCX5 294 aa12.77□□□□□ -0.37
Herc4-201ENSMUST00000020258 Dydc2Q9D3X8 139 aa12.77□□□□□ -0.37
Herc4-201ENSMUST00000020258 Ccdc83Q9D4V3 305 aa12.77□□□□□ -0.37
Herc4-201ENSMUST00000020258 Tet3Q8BG87 1668 aa12.76□□□□□ -0.37
Herc4-201ENSMUST00000020258 Tmem132bF7BAB2 1078 aa12.76□□□□□ -0.37
Herc4-201ENSMUST00000020258 Zfp408H7BX78 710 aa12.76□□□□□ -0.37
Herc4-201ENSMUST00000020258 DSCC1Q14AI0 399 aa12.76□□□□□ -0.37
Herc4-201ENSMUST00000020258 Lrrfip1Q3UZ39 729 aaKnown RBP12.76□□□□□ -0.37
Herc4-201ENSMUST00000020258 AcrbpQ3V140 540 aa12.76□□□□□ -0.37
Herc4-201ENSMUST00000020258 Olfr121Q5CZY0 321 aa12.76□□□□□ -0.37
Herc4-201ENSMUST00000020258 Kctd1Q5M956 257 aa12.76□□□□□ -0.37
Herc4-201ENSMUST00000020258 Myo19Q5SV80 963 aa12.76□□□□□ -0.37
Herc4-201ENSMUST00000020258 Csgalnact2Q8C1F4 542 aa12.76□□□□□ -0.37
Herc4-201ENSMUST00000020258 Ddx60E9PZQ1 1711 aa12.76□□□□□ -0.37
Herc4-201ENSMUST00000020258 AtrnQ9WU60 1428 aa12.76□□□□□ -0.37
Herc4-201ENSMUST00000020258 Pfkfb3A7UAK5 555 aa12.76□□□□□ -0.37
Herc4-201ENSMUST00000020258 Cnbd1B1AWM0 430 aa12.76□□□□□ -0.37
Herc4-201ENSMUST00000020258 GnaqP21279 359 aa12.76□□□□□ -0.37
Herc4-201ENSMUST00000020258 Man1a2P39098 641 aa12.76□□□□□ -0.37
Herc4-201ENSMUST00000020258 NfixP70257 488 aa12.76□□□□□ -0.37
Herc4-201ENSMUST00000020258 Rnf40Q3U319 1001 aa12.76□□□□□ -0.37
Herc4-201ENSMUST00000020258 Irak1Q62406 710 aa12.76□□□□□ -0.37
Herc4-201ENSMUST00000020258 Dhx37Q6NZL1 1150 aa12.76□□□□□ -0.37
Herc4-201ENSMUST00000020258 Haus1Q8BHX1 278 aa12.76□□□□□ -0.37
Herc4-201ENSMUST00000020258 HmcesQ8R1M0 353 aaKnown RBP12.76□□□□□ -0.37
Herc4-201ENSMUST00000020258 Tmem47Q9JJG6 181 aa12.76□□□□□ -0.37
Herc4-201ENSMUST00000020258 Git2Q9JLQ2 708 aa12.76□□□□□ -0.37
Herc4-201ENSMUST00000020258 Itga2bQ9QUM0 1033 aa12.76□□□□□ -0.37
Herc4-201ENSMUST00000020258 Col20a1Q923P0 1320 aa12.76□□□□□ -0.37
Herc4-201ENSMUST00000020258 Crb1Q8VHS2 1405 aa12.76□□□□□ -0.37
Herc4-201ENSMUST00000020258 Dnm2P39054 870 aaKnown RBP12.76□□□□□ -0.37
Herc4-201ENSMUST00000020258 Pla2g4aP47713 748 aa12.76□□□□□ -0.37
Herc4-201ENSMUST00000020258 Znf827Q505G8 1078 aa12.76□□□□□ -0.37
Herc4-201ENSMUST00000020258 Meis1Q60954 390 aa12.76□□□□□ -0.37
Herc4-201ENSMUST00000020258 Aggf1Q7TN31 711 aa12.76□□□□□ -0.37
Herc4-201ENSMUST00000020258 MlphQ91V27 590 aa12.76□□□□□ -0.37
Herc4-201ENSMUST00000020258 Trmt112Q9DCG9 125 aa12.76□□□□□ -0.37
Herc4-201ENSMUST00000020258 Cd2apQ9JLQ0 637 aa12.76□□□□□ -0.37
Herc4-201ENSMUST00000020258 Shank2Q80Z38 1476 aa12.76□□□□□ -0.37
Herc4-201ENSMUST00000020258 Nr1i2O54915 431 aa12.75□□□□□ -0.37
Herc4-201ENSMUST00000020258 Ess2O70279 479 aa12.75□□□□□ -0.37
Herc4-201ENSMUST00000020258 Gna11P21278 359 aa12.75□□□□□ -0.37
Herc4-201ENSMUST00000020258 Ppp1r7Q3UM45 361 aa12.75□□□□□ -0.37
Herc4-201ENSMUST00000020258 Tmtc2Q56A06 836 aa12.75□□□□□ -0.37
Herc4-201ENSMUST00000020258 Rbm12b2Q66JV4 834 aaKnown RBP12.75□□□□□ -0.37
Herc4-201ENSMUST00000020258 Jade3Q6IE82 823 aa12.75□□□□□ -0.37
Herc4-201ENSMUST00000020258 Lrrc15Q80X72 579 aa12.75□□□□□ -0.37
Herc4-201ENSMUST00000020258 Q8C5C9 218 aa12.75□□□□□ -0.37
Herc4-201ENSMUST00000020258 Fermt3Q8K1B8 665 aa12.75□□□□□ -0.37
Herc4-201ENSMUST00000020258 Slc51aQ8R000 340 aa12.75□□□□□ -0.37
Herc4-201ENSMUST00000020258 Enox2Q8R0Z2 598 aa12.75□□□□□ -0.37
Herc4-201ENSMUST00000020258 Q91WD4 421 aa12.75□□□□□ -0.37
Herc4-201ENSMUST00000020258 Eps8l2Q99K30 729 aa12.75□□□□□ -0.37
Herc4-201ENSMUST00000020258 AacsQ9D2R0 672 aa12.75□□□□□ -0.37
Herc4-201ENSMUST00000020258 Nol7Q9D7Z3 254 aaKnown RBP12.75□□□□□ -0.37
Herc4-201ENSMUST00000020258 Ppp2r3dQ9Z176 491 aa12.75□□□□□ -0.37
Herc4-201ENSMUST00000020258 Cul4bA2A432 970 aaKnown RBP12.75□□□□□ -0.37
Herc4-201ENSMUST00000020258 Smarca1Q6PGB8 1046 aa12.75□□□□□ -0.37
Herc4-201ENSMUST00000020258 Dpp8Q80YA7 892 aa12.75□□□□□ -0.37
Herc4-201ENSMUST00000020258 BC048507Q80ZS7 89 aa12.75□□□□□ -0.37
Herc4-201ENSMUST00000020258 D130040H23RikQ8BII3 405 aa12.75□□□□□ -0.37
Herc4-201ENSMUST00000020258 Krt79Q8VED5 531 aa12.75□□□□□ -0.37
Herc4-201ENSMUST00000020258 Eif4a3Q91VC3 411 aaKnown RBP12.75□□□□□ -0.37
Herc4-201ENSMUST00000020258 Creb3l3Q91XE9 479 aa12.75□□□□□ -0.37
Herc4-201ENSMUST00000020258 Card14Q99KF0 999 aa12.75□□□□□ -0.37
Herc4-201ENSMUST00000020258 Mrpl12Q9DB15 201 aaKnown RBP12.75□□□□□ -0.37
Herc4-201ENSMUST00000020258 Gdf11Q9Z1W4 405 aa12.75□□□□□ -0.37
Herc4-201ENSMUST00000020258 Gm28919A0A087WP35 240 aa12.75□□□□□ -0.37
Herc4-201ENSMUST00000020258 Prr29B1ARI9 187 aa12.74□□□□□ -0.37
Herc4-201ENSMUST00000020258 Kif23E9Q5G3 953 aa12.74□□□□□ -0.37
Herc4-201ENSMUST00000020258 Trip13Q3UA06 432 aa12.74□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms