RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR54, Length 86 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR54	snR54	YHR218W	P38899	603 aa		2.7	□□□□□ -1.98
snR54	snR54	SMK1	P41808	388 aa		2.7	□□□□□ -1.98
snR54	snR54	IME4	P41833	600 aa		2.7	□□□□□ -1.98
snR54	snR54	ROK1	P45818	564 aa	Predicted RBP	2.7	□□□□□ -1.98
snR54	snR54	DPB11	P47027	764 aa	Predicted RBP	2.7	□□□□□ -1.98
snR54	snR54	BNA1	P47096	177 aa		2.7	□□□□□ -1.98
snR54	snR54	STR3	P53101	465 aa	Known RBP	2.7	□□□□□ -1.98
snR54	snR54	SOL4	P53315	255 aa		2.7	□□□□□ -1.98
snR54	snR54	TDA7	P53882	636 aa	Predicted RBP	2.7	□□□□□ -1.98
snR54	snR54	RBA50	Q04418	439 aa		2.7	□□□□□ -1.98
snR54	snR54	TRM8	Q12009	286 aa		2.7	□□□□□ -1.98
snR54	snR54	ACH1	P32316	526 aa		2.69	□□□□□ -1.98
snR54	snR54	TEF4	P36008	412 aa	Known RBP	2.69	□□□□□ -1.98
snR54	snR54	DIM1	P41819	318 aa	Known RBP	2.69	□□□□□ -1.98
snR54	snR54	PSR2	Q07949	397 aa		2.69	□□□□□ -1.98
snR54	snR54	INP53	Q12271	1107 aa		2.69	□□□□□ -1.98
snR54	snR54	YLR302C	O13544	120 aa		2.68	□□□□□ -1.98
snR54	snR54	SNF3	P10870	884 aa		2.68	□□□□□ -1.98
snR54	snR54	SAN1	P22470	610 aa		2.68	□□□□□ -1.98
snR54	snR54	CPR3	P25719	182 aa		2.68	□□□□□ -1.98
snR54	snR54	ATS1	P31386	333 aa		2.68	□□□□□ -1.98
snR54	snR54	LOS1	P33418	1100 aa	Predicted RBP	2.68	□□□□□ -1.98
snR54	snR54	RPS10B	P46784	105 aa	Known RBP	2.68	□□□□□ -1.98
snR54	snR54	ZDS2	P54786	942 aa		2.68	□□□□□ -1.98
snR54	snR54	MSS11	Q03825	758 aa		2.68	□□□□□ -1.98
snR54	snR54	RSA1	Q08932	381 aa		2.68	□□□□□ -1.98
snR54	snR54	APL4	Q12028	832 aa		2.68	□□□□□ -1.98
snR54	snR54	PPT2	Q12036	173 aa		2.68	□□□□□ -1.98
snR54	snR54	YBR085C-A	O43137	85 aa		2.67	□□□□□ -1.98
snR54	snR54	SNF1	P06782	633 aa	Known RBP	2.67	□□□□□ -1.98
snR54	snR54	PFK2	P16862	959 aa	Known RBP RIP-Chip data	2.67	□□□□□ -1.98	not detected
snR54	snR54	RPS2	P25443	254 aa	Known RBP	2.67	□□□□□ -1.98
snR54	snR54	BUD14	P27637	709 aa		2.67	□□□□□ -1.98
snR54	snR54	SNU114	P36048	1008 aa	Known RBP	2.67	□□□□□ -1.98
snR54	snR54	UBA4	P38820	440 aa		2.67	□□□□□ -1.98
snR54	snR54	RIC1	P40395	1056 aa		2.67	□□□□□ -1.98
snR54	snR54	AXL1	P40851	1208 aa		2.67	□□□□□ -1.98
snR54	snR54	SMC3	P47037	1230 aa		2.67	□□□□□ -1.98
snR54	snR54	IKS1	P47042	667 aa		2.67	□□□□□ -1.98
snR54	snR54	VPS4	P52917	437 aa		2.67	□□□□□ -1.98
snR54	snR54	TLG2	Q08144	397 aa		2.67	□□□□□ -1.98
snR54	snR54	RPS10A	Q08745	105 aa	Predicted RBP	2.67	□□□□□ -1.98
snR54	snR54	CYB2	P00175	591 aa		2.66	□□□□□ -1.98
snR54	snR54	TYR1	P20049	452 aa		2.66	□□□□□ -1.98
snR54	snR54	MRP20	P32387	263 aa		2.66	□□□□□ -1.98
snR54	snR54	CNS1	P33313	385 aa		2.66	□□□□□ -1.98
snR54	snR54	YKL050C	P35736	922 aa		2.66	□□□□□ -1.98
snR54	snR54	KTR3	P38130	404 aa	Predicted RBP	2.66	□□□□□ -1.98
snR54	snR54	AVT5	P38176	459 aa		2.66	□□□□□ -1.98
snR54	snR54	MDM31	P38880	579 aa		2.66	□□□□□ -1.98
snR54	snR54	FMP10	P40098	244 aa		2.66	□□□□□ -1.98
snR54	snR54	YJR061W	P40355	935 aa		2.66	□□□□□ -1.98
snR54	snR54	RPS7B	P48164	190 aa	Known RBP	2.66	□□□□□ -1.98
snR54	snR54	YMR087W	Q04299	284 aa		2.66	□□□□□ -1.98
snR54	snR54	VID22	Q05934	901 aa		2.66	□□□□□ -1.98
snR54	snR54	DIC1	Q06143	298 aa		2.66	□□□□□ -1.98
snR54	snR54	NUS1	Q12063	375 aa		2.66	□□□□□ -1.98
snR54	snR54	PDH1	Q12428	516 aa	Known RBP	2.66	□□□□□ -1.98
snR54	snR54	RPL15A	P05748	204 aa	Known RBP	2.65	□□□□□ -1.99
snR54	snR54	RPB2	P08518	1224 aa	Known RBP	2.65	□□□□□ -1.99
snR54	snR54	AGA1	P32323	725 aa		2.65	□□□□□ -1.99
snR54	snR54	XRS2	P33301	854 aa		2.65	□□□□□ -1.99
snR54	snR54	ALY1	P36117	915 aa		2.65	□□□□□ -1.99
snR54	snR54	RRP3	P38712	501 aa	Known RBP	2.65	□□□□□ -1.99
snR54	snR54	UME6	P39001	836 aa		2.65	□□□□□ -1.99
snR54	snR54	UIP3	P39547	235 aa		2.65	□□□□□ -1.99
snR54	snR54	BUR6	P40096	142 aa		2.65	□□□□□ -1.99
snR54	snR54	YDL186W	P48568	277 aa		2.65	□□□□□ -1.99
snR54	snR54	EMI2	Q04409	500 aa	Known RBP	2.65	□□□□□ -1.99
snR54	snR54	SKG3	Q06315	1026 aa		2.65	□□□□□ -1.99
snR54	snR54	YEH2	Q07950	538 aa		2.65	□□□□□ -1.99
snR54	snR54	GDH1	P07262	454 aa	Known RBP	2.64	□□□□□ -1.99
snR54	snR54	ROT2	P38138	954 aa		2.64	□□□□□ -1.99
snR54	snR54	SLZ1	P40167	298 aa		2.64	□□□□□ -1.99
snR54	snR54	PYK2	P52489	506 aa	Known RBP	2.64	□□□□□ -1.99
snR54	snR54	PIL1	P53252	339 aa	Known RBP	2.64	□□□□□ -1.99
snR54	snR54	INN1	P53901	409 aa		2.64	□□□□□ -1.99
snR54	snR54	GTR1	Q00582	310 aa		2.64	□□□□□ -1.99
snR54	snR54	YPL014W	Q02606	381 aa		2.64	□□□□□ -1.99
snR54	snR54	MUB1	Q03162	620 aa		2.64	□□□□□ -1.99
snR54	snR54	HCR1	Q05775	265 aa	Known RBP	2.64	□□□□□ -1.99
snR54	snR54	SSK1	Q07084	712 aa		2.64	□□□□□ -1.99
snR54	snR54	RTT109	Q07794	436 aa		2.64	□□□□□ -1.99
snR54	snR54	ARP6	Q12509	438 aa		2.64	□□□□□ -1.99
snR54	snR54	PUT2	P07275	575 aa		2.63	□□□□□ -1.99
snR54	snR54	SPE2	P21182	396 aa		2.63	□□□□□ -1.99
snR54	snR54	SGV1	P23293	657 aa	Known RBP	2.63	□□□□□ -1.99
snR54	snR54	ECM15	P35195	104 aa		2.63	□□□□□ -1.99
snR54	snR54	TSC10	P38342	320 aa		2.63	□□□□□ -1.99
snR54	snR54	DIA4	P38705	446 aa	Predicted RBP	2.63	□□□□□ -1.99
snR54	snR54	DBP8	P38719	431 aa		2.63	□□□□□ -1.99
snR54	snR54	ELO1	P39540	310 aa		2.63	□□□□□ -1.99
snR54	snR54	RPH1	P39956	796 aa		2.63	□□□□□ -1.99
snR54	snR54	RPR2	P40571	144 aa		2.63	□□□□□ -1.99
snR54	snR54	SAP185	P40856	1058 aa		2.63	□□□□□ -1.99
snR54	snR54	YJL213W	P40896	331 aa		2.63	□□□□□ -1.99
snR54	snR54	YFR016C	P43597	1233 aa	Known RBP	2.63	□□□□□ -1.99
snR54	snR54	RTT101	P47050	842 aa		2.63	□□□□□ -1.99
snR54	snR54	YVH1	Q02256	364 aa	Known RBP	2.63	□□□□□ -1.99
snR54	snR54	RPM2	Q02773	1202 aa		2.63	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 31.8 ms