RNA–Protein interactions for RNA: snR17b

snR17b, Transcript of Small nucleolar RNA (snoRNA) U3, yeast

Gene snR17b, Length 332 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR17b	snR17b	SLD7	Q08457	257 aa		4.81	□□□□□ -1.64
snR17b	snR17b	NRT1	Q08485	598 aa		4.81	□□□□□ -1.64
snR17b	snR17b	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
snR17b	snR17b	RTT10	Q08924	1013 aa		4.81	□□□□□ -1.64
snR17b	snR17b	YBR298C-A	Q8TGK4	73 aa		4.81	□□□□□ -1.64
snR17b	snR17b	THP2	O13539	261 aa	Known RBP	4.8	□□□□□ -1.64
snR17b	snR17b	CCP1	P00431	361 aa		4.8	□□□□□ -1.64
snR17b	snR17b	CBP2	P03874	630 aa	Predicted RBP	4.8	□□□□□ -1.64
snR17b	snR17b	PDE2	P06776	526 aa		4.8	□□□□□ -1.64
snR17b	snR17b	LEU1	P07264	779 aa	Known RBP	4.8	□□□□□ -1.64
snR17b	snR17b	ERG20	P08524	352 aa	Known RBP	4.8	□□□□□ -1.64
snR17b	snR17b	RPL4A	P10664	362 aa	Known RBP	4.8	□□□□□ -1.64
snR17b	snR17b	ENA1	P13587	1091 aa		4.8	□□□□□ -1.64
snR17b	snR17b	NMT1	P14743	455 aa		4.8	□□□□□ -1.64
snR17b	snR17b	GRX2	P17695	143 aa	Known RBP	4.8	□□□□□ -1.64
snR17b	snR17b	DBR1	P24309	405 aa	Known RBP	4.8	□□□□□ -1.64
snR17b	snR17b	PPZ1	P26570	692 aa		4.8	□□□□□ -1.64
snR17b	snR17b	NTG1	P31378	399 aa		4.8	□□□□□ -1.64
snR17b	snR17b	FUN30	P31380	1131 aa		4.8	□□□□□ -1.64
snR17b	snR17b	SMI1	P32566	505 aa		4.8	□□□□□ -1.64
snR17b	snR17b	PAH1	P32567	862 aa		4.8	□□□□□ -1.64
snR17b	snR17b	AIM26	P32858	118 aa		4.8	□□□□□ -1.64
snR17b	snR17b	SHP1	P34223	423 aa		4.8	□□□□□ -1.64
snR17b	snR17b	NOP4	P37838	685 aa	Known RBP	4.8	□□□□□ -1.64
snR17b	snR17b	ROT2	P38138	954 aa		4.8	□□□□□ -1.64
snR17b	snR17b	VID24	P38263	362 aa		4.8	□□□□□ -1.64
snR17b	snR17b	AIM18	P38884	321 aa		4.8	□□□□□ -1.64
snR17b	snR17b	IPT1	P38954	527 aa		4.8	□□□□□ -1.64
snR17b	snR17b	VMA7	P39111	118 aa		4.8	□□□□□ -1.64
snR17b	snR17b	YEN1	P40028	759 aa		4.8	□□□□□ -1.64
snR17b	snR17b	SER3	P40054	469 aa		4.8	□□□□□ -1.64
snR17b	snR17b	REF2	P42073	533 aa	Predicted RBP	4.8	□□□□□ -1.64
snR17b	snR17b	AIM23	P47015	356 aa		4.8	□□□□□ -1.64
snR17b	snR17b	HOC1	P47124	396 aa		4.8	□□□□□ -1.64
snR17b	snR17b	YJR098C	P47139	656 aa		4.8	□□□□□ -1.64
snR17b	snR17b	RPL4B	P49626	362 aa	Known RBP	4.8	□□□□□ -1.64
snR17b	snR17b	STB4	P50104	949 aa		4.8	□□□□□ -1.64
snR17b	snR17b	YGR053C	P53234	283 aa		4.8	□□□□□ -1.64
snR17b	snR17b	CWC25	P53854	179 aa	Known RBP	4.8	□□□□□ -1.64
snR17b	snR17b	ENA2	Q01896	1091 aa		4.8	□□□□□ -1.64
snR17b	snR17b	YPL107W	Q02873	248 aa		4.8	□□□□□ -1.64
snR17b	snR17b	ISU1	Q03020	165 aa		4.8	□□□□□ -1.64
snR17b	snR17b	SVL3	Q03088	825 aa	Known RBP	4.8	□□□□□ -1.64
snR17b	snR17b	YML037C	Q03703	340 aa		4.8	□□□□□ -1.64
snR17b	snR17b	SNU56	Q03782	492 aa	Known RBP	4.8	□□□□□ -1.64
snR17b	snR17b	DUS3	Q06053	668 aa	Known RBP	4.8	□□□□□ -1.64
snR17b	snR17b	RRP9	Q06506	573 aa	Known RBP	4.8	□□□□□ -1.64
snR17b	snR17b	GPI11	Q06636	219 aa		4.8	□□□□□ -1.64
snR17b	snR17b	DIS3	Q08162	1001 aa	Known RBP	4.8	□□□□□ -1.64
snR17b	snR17b	YOL036W	Q08206	761 aa		4.8	□□□□□ -1.64
snR17b	snR17b	RAX1	Q08760	435 aa		4.8	□□□□□ -1.64
snR17b	snR17b	PGC1	Q08959	321 aa		4.8	□□□□□ -1.64
snR17b	snR17b	SAM4	Q08985	325 aa	Known RBP	4.8	□□□□□ -1.64
snR17b	snR17b	RAD59	Q12223	238 aa		4.8	□□□□□ -1.64
snR17b	snR17b	ATG34	Q12292	412 aa		4.8	□□□□□ -1.64
snR17b	snR17b	PFK27	Q12471	397 aa	Predicted RBP	4.8	□□□□□ -1.64
snR17b	snR17b	ENA5	Q12691	1091 aa		4.8	□□□□□ -1.64
snR17b	snR17b	YOL159C-A	Q3E769	90 aa		4.8	□□□□□ -1.64
snR17b	snR17b	ARG3	P05150	338 aa		4.79	□□□□□ -1.64
snR17b	snR17b	GPH1	P06738	902 aa	Known RBP	4.79	□□□□□ -1.64
snR17b	snR17b	ADE5,7	P07244	802 aa	Known RBP	4.79	□□□□□ -1.64
snR17b	snR17b	SSA1	P10591	642 aa	Known RBP	4.79	□□□□□ -1.64
snR17b	snR17b	WHI2	P12611	486 aa		4.79	□□□□□ -1.64
snR17b	snR17b	YAP1	P19880	650 aa	Known RBP	4.79	□□□□□ -1.64
snR17b	snR17b	ATP12	P22135	325 aa		4.79	□□□□□ -1.64
snR17b	snR17b	RPL24B	P24000	155 aa	Known RBP	4.79	□□□□□ -1.64
snR17b	snR17b	YSP3	P25036	478 aa		4.79	□□□□□ -1.64
snR17b	snR17b	GIT1	P25346	518 aa		4.79	□□□□□ -1.64
snR17b	snR17b	CHA1	P25379	360 aa	Known RBP	4.79	□□□□□ -1.64
snR17b	snR17b	VBA3	P25594	458 aa		4.79	□□□□□ -1.64
snR17b	snR17b	YCR090C	P25654	182 aa	Known RBP	4.79	□□□□□ -1.64
snR17b	snR17b	PRR1	P28708	518 aa		4.79	□□□□□ -1.64
snR17b	snR17b	PEP7	P32609	515 aa		4.79	□□□□□ -1.64
snR17b	snR17b	IMP3	P32899	183 aa	Predicted RBP	4.79	□□□□□ -1.64
snR17b	snR17b	MCR1	P36060	302 aa	Known RBP	4.79	□□□□□ -1.64
snR17b	snR17b	VBA5	P36172	582 aa		4.79	□□□□□ -1.64
snR17b	snR17b	ABZ1	P37254	787 aa	Predicted RBP	4.79	□□□□□ -1.64
snR17b	snR17b	VRP1	P37370	817 aa		4.79	□□□□□ -1.64
snR17b	snR17b	HSL7	P38274	827 aa		4.79	□□□□□ -1.64
snR17b	snR17b	BIT2	P38346	545 aa		4.79	□□□□□ -1.64
snR17b	snR17b	YHR020W	P38708	688 aa	Known RBP	4.79	□□□□□ -1.64
snR17b	snR17b	PPE1	P38796	400 aa		4.79	□□□□□ -1.64
snR17b	snR17b	YHR219W	P38900	624 aa		4.79	□□□□□ -1.64
snR17b	snR17b	SOP4	P39543	234 aa	Predicted RBP	4.79	□□□□□ -1.64
snR17b	snR17b	YEL020C	P39994	560 aa		4.79	□□□□□ -1.64
snR17b	snR17b	MIT1	P40002	666 aa		4.79	□□□□□ -1.64
snR17b	snR17b	COA1	P40452	197 aa		4.79	□□□□□ -1.64
snR17b	snR17b	SEC28	P40509	296 aa	Known RBP	4.79	□□□□□ -1.64
snR17b	snR17b	YGR210C	P42942	411 aa		4.79	□□□□□ -1.64
snR17b	snR17b	GUF1	P46943	645 aa		4.79	□□□□□ -1.64
snR17b	snR17b	MDE1	P47095	244 aa		4.79	□□□□□ -1.64
snR17b	snR17b	KEL2	P50090	882 aa		4.79	□□□□□ -1.64
snR17b	snR17b	SAP4	P53036	818 aa		4.79	□□□□□ -1.64
snR17b	snR17b	ARO8	P53090	500 aa	Known RBP	4.79	□□□□□ -1.64
snR17b	snR17b	TPO2	P53283	614 aa		4.79	□□□□□ -1.64
snR17b	snR17b	MRPL50	P53724	139 aa		4.79	□□□□□ -1.64
snR17b	snR17b	CPR8	P53728	308 aa		4.79	□□□□□ -1.64
snR17b	snR17b	GRX5	Q02784	150 aa		4.79	□□□□□ -1.64
snR17b	snR17b	MUK1	Q02866	612 aa		4.79	□□□□□ -1.64
snR17b	snR17b	UGO1	Q03327	502 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms