RNA–Protein interactions for RNA: YPL087W

YDC1, Transcript of Alkaline dihydroceramidase, involved in sphingolipid metabolism, yeast

Gene YDC1, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDC1	YPL087W	SOF1	P33750	489 aa	Known RBP	4.99	□□□□□ -1.61
YDC1	YPL087W	EXO84	P38261	753 aa		4.99	□□□□□ -1.61
YDC1	YPL087W	UBP7	P40453	1071 aa		4.99	□□□□□ -1.61
YDC1	YPL087W	RMT2	Q03305	412 aa		4.99	□□□□□ -1.61
YDC1	YPL087W	STP3	Q05937	343 aa		4.99	□□□□□ -1.61
YDC1	YPL087W	YAP7	Q08182	245 aa		4.99	□□□□□ -1.61
YDC1	YPL087W	MCH4	Q08268	501 aa		4.99	□□□□□ -1.61
YDC1	YPL087W	TMA16	Q08687	178 aa		4.99	□□□□□ -1.61
YDC1	YPL087W	NUS1	Q12063	375 aa		4.99	□□□□□ -1.61
YDC1	YPL087W	NBP2	Q12163	236 aa		4.99	□□□□□ -1.61
YDC1	YPL087W	RRI1	Q12468	440 aa		4.99	□□□□□ -1.61
YDC1	YPL087W	CNA1	P23287	553 aa		4.98	□□□□□ -1.61
YDC1	YPL087W	MSP1	P28737	362 aa		4.98	□□□□□ -1.61
YDC1	YPL087W	MGM1	P32266	881 aa		4.98	□□□□□ -1.61
YDC1	YPL087W	ECM32	P32644	1121 aa	Known RBP	4.98	□□□□□ -1.61
YDC1	YPL087W	SLC1	P33333	303 aa		4.98	□□□□□ -1.61
YDC1	YPL087W	AAP1	P37898	856 aa	Known RBP	4.98	□□□□□ -1.61
YDC1	YPL087W	IFA38	P38286	347 aa		4.98	□□□□□ -1.61
YDC1	YPL087W	YPR003C	P53394	754 aa		4.98	□□□□□ -1.61
YDC1	YPL087W	FCP1	Q03254	732 aa		4.98	□□□□□ -1.61
YDC1	YPL087W	SWF1	Q04629	336 aa		4.98	□□□□□ -1.61
YDC1	YPL087W	CRN1	Q06440	651 aa		4.98	□□□□□ -1.61
YDC1	YPL087W	SSP2	Q08646	371 aa		4.98	□□□□□ -1.61
YDC1	YPL087W	YLR302C	O13544	120 aa		4.97	□□□□□ -1.61
YDC1	YPL087W	TOP1	P04786	769 aa		4.97	□□□□□ -1.61
YDC1	YPL087W	YCR006C	P25350	157 aa		4.97	□□□□□ -1.61
YDC1	YPL087W	SRB5	P32585	307 aa		4.97	□□□□□ -1.61
YDC1	YPL087W	ASK1	P35734	292 aa		4.97	□□□□□ -1.61
YDC1	YPL087W	FUI1	P38196	639 aa		4.97	□□□□□ -1.61
YDC1	YPL087W	SEC31	P38968	1273 aa	Known RBP	4.97	□□□□□ -1.61
YDC1	YPL087W	PFK26	P40433	827 aa	Known RBP	4.97	□□□□□ -1.61
YDC1	YPL087W	GTR1	Q00582	310 aa		4.97	□□□□□ -1.61
YDC1	YPL087W	ECM22	Q05958	814 aa	Predicted RBP	4.97	□□□□□ -1.61
YDC1	YPL087W	PFA4	Q12006	378 aa		4.97	□□□□□ -1.61
YDC1	YPL087W	ATX2	Q12067	313 aa		4.97	□□□□□ -1.61
YDC1	YPL087W	RAD24	P32641	659 aa		4.96	□□□□□ -1.62
YDC1	YPL087W	NUP133	P36161	1157 aa		4.96	□□□□□ -1.62
YDC1	YPL087W	CDC1	P40986	491 aa		4.96	□□□□□ -1.62
YDC1	YPL087W	VPS25	P47142	202 aa		4.96	□□□□□ -1.62
YDC1	YPL087W	PSP1	P50896	841 aa	Known RBP	4.96	□□□□□ -1.62
YDC1	YPL087W	MLC1	P53141	149 aa		4.96	□□□□□ -1.62
YDC1	YPL087W	SCW4	P53334	386 aa	Known RBP	4.96	□□□□□ -1.62
YDC1	YPL087W	MPS1	P54199	764 aa		4.96	□□□□□ -1.62
YDC1	YPL087W	PIG1	Q06216	648 aa		4.96	□□□□□ -1.62
YDC1	YPL087W	ETT1	Q08421	412 aa	Known RBP	4.96	□□□□□ -1.62
YDC1	YPL087W	NEW1	Q08972	1196 aa	Known RBP	4.96	□□□□□ -1.62
YDC1	YPL087W	OSM1	P21375	501 aa	Known RBP	4.95	□□□□□ -1.62
YDC1	YPL087W	GEX2	P36173	615 aa		4.95	□□□□□ -1.62
YDC1	YPL087W	FLO5	P38894	1075 aa		4.95	□□□□□ -1.62
YDC1	YPL087W	RSM25	P40496	264 aa		4.95	□□□□□ -1.62
YDC1	YPL087W	VPS4	P52917	437 aa		4.95	□□□□□ -1.62
YDC1	YPL087W	PIL1	P53252	339 aa	Known RBP	4.95	□□□□□ -1.62
YDC1	YPL087W	VID22	Q05934	901 aa		4.95	□□□□□ -1.62
YDC1	YPL087W	ALE1	Q08548	619 aa		4.95	□□□□□ -1.62
YDC1	YPL087W	PDR18	P53756	1333 aa		4.95	□□□□□ -1.62
YDC1	YPL087W	YSP3	P25036	478 aa		4.94	□□□□□ -1.62
YDC1	YPL087W	EBP2	P36049	427 aa	Known RBP	4.94	□□□□□ -1.62
YDC1	YPL087W	NTR2	P36118	322 aa	Predicted RBP	4.94	□□□□□ -1.62
YDC1	YPL087W	OSH3	P38713	996 aa	Known RBP	4.94	□□□□□ -1.62
YDC1	YPL087W	SPO22	P40511	975 aa		4.94	□□□□□ -1.62
YDC1	YPL087W	HYR1	P40581	163 aa	Known RBP	4.94	□□□□□ -1.62
YDC1	YPL087W	YPT11	P48559	417 aa		4.94	□□□□□ -1.62
YDC1	YPL087W	HST1	P53685	503 aa		4.94	□□□□□ -1.62
YDC1	YPL087W	IST1	P53843	298 aa	Predicted RBP	4.94	□□□□□ -1.62
YDC1	YPL087W	YLR455W	Q06188	304 aa		4.94	□□□□□ -1.62
YDC1	YPL087W	TFC6	Q06339	672 aa		4.94	□□□□□ -1.62
YDC1	YPL087W	HER1	Q12276	1246 aa		4.94	□□□□□ -1.62
YDC1	YPL087W	SNF1	P06782	633 aa	Known RBP	4.93	□□□□□ -1.62
YDC1	YPL087W	TRX2	P22803	104 aa	Known RBP	4.93	□□□□□ -1.62
YDC1	YPL087W	AIM17	P23180	465 aa	Known RBP	4.93	□□□□□ -1.62
YDC1	YPL087W	RER1	P25560	188 aa		4.93	□□□□□ -1.62
YDC1	YPL087W	ADE17	P38009	592 aa	Known RBP	4.93	□□□□□ -1.62
YDC1	YPL087W	YIR016W	P40572	265 aa		4.93	□□□□□ -1.62
YDC1	YPL087W	MDV1	P47025	714 aa		4.93	□□□□□ -1.62
YDC1	YPL087W	RCO1	Q04779	684 aa		4.93	□□□□□ -1.62
YDC1	YPL087W	CTI6	Q08923	506 aa		4.93	□□□□□ -1.62
YDC1	YPL087W	VCX1	Q99385	411 aa		4.93	□□□□□ -1.62
YDC1	YPL087W	RIM15	P43565	1770 aa		4.93	□□□□□ -1.62
YDC1	YPL087W	SWI1	P09547	1314 aa		4.93	□□□□□ -1.62
YDC1	YPL087W	HXK2	P04807	486 aa	Known RBP	4.92	□□□□□ -1.62
YDC1	YPL087W	YER190C-B	P0CX94	160 aa		4.92	□□□□□ -1.62
YDC1	YPL087W	YEL077W-A	P0CX95	160 aa		4.92	□□□□□ -1.62
YDC1	YPL087W	YGR296C-B	P0CX96	160 aa		4.92	□□□□□ -1.62
YDC1	YPL087W	YPL283W-B	P0CX97	160 aa		4.92	□□□□□ -1.62
YDC1	YPL087W	YPR204C-A	P0CX98	160 aa		4.92	□□□□□ -1.62
YDC1	YPL087W	SRP54	P20424	541 aa	Known RBP	4.92	□□□□□ -1.62
YDC1	YPL087W	RRN3	P36070	627 aa		4.92	□□□□□ -1.62
YDC1	YPL087W	CAB3	P36076	571 aa		4.92	□□□□□ -1.62
YDC1	YPL087W	YER010C	P40011	234 aa		4.92	□□□□□ -1.62
YDC1	YPL087W	CTK2	P46962	323 aa		4.92	□□□□□ -1.62
YDC1	YPL087W	BOP3	P53958	396 aa		4.92	□□□□□ -1.62
YDC1	YPL087W	REG1	Q00816	1014 aa		4.92	□□□□□ -1.62
YDC1	YPL087W	RSM28	Q03430	361 aa		4.92	□□□□□ -1.62
YDC1	YPL087W	YMR018W	Q04364	514 aa		4.92	□□□□□ -1.62
YDC1	YPL087W	PSK2	Q08217	1101 aa		4.92	□□□□□ -1.62
YDC1	YPL087W	GEP3	Q08622	556 aa		4.92	□□□□□ -1.62
YDC1	YPL087W	TRM8	Q12009	286 aa		4.92	□□□□□ -1.62
YDC1	YPL087W	UBX3	Q12229	455 aa		4.92	□□□□□ -1.62
YDC1	YPL087W	PCD1	Q12524	340 aa		4.92	□□□□□ -1.62
YDC1	YPL087W	GAL4	P04386	881 aa		4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms