RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W FAF1P40546 346 aaPredicted RBP1.37□□□□□ -2.19
SGF11YPL047W SWP82P43554 623 aa1.37□□□□□ -2.19
SGF11YPL047W CPR6P53691 371 aaKnown RBP1.37□□□□□ -2.19
SGF11YPL047W IST1P53843 298 aaPredicted RBP1.37□□□□□ -2.19
SGF11YPL047W MOT3P54785 490 aaKnown RBP1.37□□□□□ -2.19
SGF11YPL047W VAM6Q07468 1049 aa1.37□□□□□ -2.19
SGF11YPL047W TMC1Q08422 150 aaPredicted RBP1.37□□□□□ -2.19
SGF11YPL047W RRP6Q12149 733 aaKnown RBP1.37□□□□□ -2.19
SGF11YPL047W AYT1Q12226 474 aa1.37□□□□□ -2.19
SGF11YPL047W YOL114CQ12322 202 aa1.37□□□□□ -2.19
SGF11YPL047W FAB1P34756 2278 aa1.36□□□□□ -2.19
SGF11YPL047W PIF1P07271 859 aa1.36□□□□□ -2.19
SGF11YPL047W SST2P11972 698 aaKnown RBP1.36□□□□□ -2.19
SGF11YPL047W LCB1P25045 558 aaKnown RBP1.36□□□□□ -2.19
SGF11YPL047W SNC1P31109 117 aa1.36□□□□□ -2.19
SGF11YPL047W SIP2P34164 415 aaKnown RBP1.36□□□□□ -2.19
SGF11YPL047W SMC3P47037 1230 aa1.36□□□□□ -2.19
SGF11YPL047W BTN2P53286 410 aa1.36□□□□□ -2.19
SGF11YPL047W SAM50P53969 484 aa1.36□□□□□ -2.19
SGF11YPL047W TGL2P54857 326 aa1.36□□□□□ -2.19
SGF11YPL047W SSK1Q07084 712 aa1.36□□□□□ -2.19
SGF11YPL047W APL4Q12028 832 aa1.36□□□□□ -2.19
SGF11YPL047W YCL021W-AQ96VH3 125 aa1.36□□□□□ -2.19
SGF11YPL047W SOD1P00445 154 aaKnown RBP1.35□□□□□ -2.19
SGF11YPL047W HXK2P04807 486 aaKnown RBP1.35□□□□□ -2.19
SGF11YPL047W HEM2P05373 342 aa1.35□□□□□ -2.19
SGF11YPL047W PMR1P13586 950 aa1.35□□□□□ -2.19
SGF11YPL047W DEG1P31115 442 aaKnown RBP1.35□□□□□ -2.19
SGF11YPL047W SAC6P32599 642 aaKnown RBP1.35□□□□□ -2.19
SGF11YPL047W PRS1P32895 427 aaKnown RBP1.35□□□□□ -2.19
SGF11YPL047W TFC3P34111 1160 aa1.35□□□□□ -2.19
SGF11YPL047W ECM15P35195 104 aa1.35□□□□□ -2.19
SGF11YPL047W TUL1P36096 758 aa1.35□□□□□ -2.19
SGF11YPL047W NPR2P39923 615 aa1.35□□□□□ -2.19
SGF11YPL047W CTF18P49956 741 aa1.35□□□□□ -2.19
SGF11YPL047W ASE1P50275 885 aa1.35□□□□□ -2.19
SGF11YPL047W CSL4P53859 292 aaPredicted RBP1.35□□□□□ -2.19
SGF11YPL047W TRS130Q03660 1102 aa1.35□□□□□ -2.19
SGF11YPL047W HNT3Q08702 217 aa1.35□□□□□ -2.19
SGF11YPL047W MSS18P08593 268 aa1.34□□□□□ -2.19
SGF11YPL047W SNF3P10870 884 aa1.34□□□□□ -2.19
SGF11YPL047W NCP1P16603 691 aaKnown RBP1.34□□□□□ -2.19
SGF11YPL047W SPE2P21182 396 aa1.34□□□□□ -2.19
SGF11YPL047W RER1P25560 188 aa1.34□□□□□ -2.19
SGF11YPL047W CDC15P27636 974 aa1.34□□□□□ -2.19
SGF11YPL047W SRB5P32585 307 aa1.34□□□□□ -2.19
SGF11YPL047W ROT2P38138 954 aa1.34□□□□□ -2.19
SGF11YPL047W ARP1P38696 384 aa1.34□□□□□ -2.19
SGF11YPL047W NPR3P38742 1146 aa1.34□□□□□ -2.19
SGF11YPL047W UBA4P38820 440 aa1.34□□□□□ -2.19
SGF11YPL047W SPC72P39723 622 aa1.34□□□□□ -2.19
SGF11YPL047W PKP1P40530 394 aa1.34□□□□□ -2.19
SGF11YPL047W ADE13Q05911 482 aaKnown RBP1.34□□□□□ -2.19
SGF11YPL047W MHR1Q06630 226 aa1.34□□□□□ -2.19
SGF11YPL047W THI20Q08224 551 aa1.34□□□□□ -2.19
SGF11YPL047W YOR387CQ08910 206 aa1.34□□□□□ -2.19
SGF11YPL047W CAR1P00812 333 aaKnown RBP1.33□□□□□ -2.2
SGF11YPL047W SSB1P11484 613 aaKnown RBP1.33□□□□□ -2.2
SGF11YPL047W ATR1P13090 542 aa1.33□□□□□ -2.2
SGF11YPL047W SPT15P13393 240 aaKnown RBP1.33□□□□□ -2.2
SGF11YPL047W CLB4P24871 460 aa1.33□□□□□ -2.2
SGF11YPL047W YME1P32795 747 aa1.33□□□□□ -2.2
SGF11YPL047W PAD1P33751 242 aaKnown RBP RIP-Chip data1.33□□□□□ -2.2not detected
SGF11YPL047W YKL050CP35736 922 aa1.33□□□□□ -2.2
SGF11YPL047W YKL133CP36066 463 aa1.33□□□□□ -2.2
SGF11YPL047W YBR138CP38277 524 aa1.33□□□□□ -2.2
SGF11YPL047W NDT80P38830 627 aa1.33□□□□□ -2.2
SGF11YPL047W SSB2P40150 613 aaKnown RBP1.33□□□□□ -2.2
SGF11YPL047W SIM1P40472 476 aa1.33□□□□□ -2.2
SGF11YPL047W DPB11P47027 764 aaPredicted RBP1.33□□□□□ -2.2
SGF11YPL047W TIS11P47977 285 aa1.33□□□□□ -2.2
SGF11YPL047W WSC2P53832 503 aa1.33□□□□□ -2.2
SGF11YPL047W FOL1P53848 824 aa1.33□□□□□ -2.2
SGF11YPL047W YMR160WQ03823 816 aa1.33□□□□□ -2.2
SGF11YPL047W YMR087WQ04299 284 aa1.33□□□□□ -2.2
SGF11YPL047W DIC1Q06143 298 aa1.33□□□□□ -2.2
SGF11YPL047W MLC2Q06580 163 aa1.33□□□□□ -2.2
SGF11YPL047W YOL057WQ08225 711 aa1.33□□□□□ -2.2
SGF11YPL047W TMA16Q08687 178 aa1.33□□□□□ -2.2
SGF11YPL047W NKP1Q12493 238 aa1.33□□□□□ -2.2
SGF11YPL047W RRP12Q12754 1228 aaKnown RBP1.33□□□□□ -2.2
SGF11YPL047W PGS1P25578 521 aa1.32□□□□□ -2.2
SGF11YPL047W NAM9P27929 486 aa1.32□□□□□ -2.2
SGF11YPL047W FUN19P28003 413 aaPredicted RBP1.32□□□□□ -2.2
SGF11YPL047W YBL059WP34224 193 aa1.32□□□□□ -2.2
SGF11YPL047W PMU1P36069 295 aa1.32□□□□□ -2.2
SGF11YPL047W VPS27P40343 622 aaKnown RBP1.32□□□□□ -2.2
SGF11YPL047W CSM2P40465 213 aa1.32□□□□□ -2.2
SGF11YPL047W TAN1P53072 289 aaPredicted RBP1.32□□□□□ -2.2
SGF11YPL047W STR3P53101 465 aaKnown RBP1.32□□□□□ -2.2
SGF11YPL047W PEX8P53248 589 aa1.32□□□□□ -2.2
SGF11YPL047W MSO1P53604 210 aaKnown RBP1.32□□□□□ -2.2
SGF11YPL047W YLR152CP54072 576 aa1.32□□□□□ -2.2
SGF11YPL047W GLO2Q05584 274 aa1.32□□□□□ -2.2
SGF11YPL047W HIM1Q06674 414 aa1.32□□□□□ -2.2
SGF11YPL047W ERG27Q12452 347 aaKnown RBP1.32□□□□□ -2.2
SGF11YPL047W TMA7Q3E764 64 aaKnown RBP1.32□□□□□ -2.2
SGF11YPL047W YER078W-AQ3E7A2 54 aa1.32□□□□□ -2.2
SGF11YPL047W ATP4P05626 244 aa1.31□□□□□ -2.2
SGF11YPL047W PTP2P29461 750 aa1.31□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms