RNA–Protein interactions for RNA: YOR378W

AMF1, Transcript of Putative paralog of ATR1, yeastyeast

Gene AMF1, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AMF1YOR378W MPT5P39016 859 aaKnown RBP RIP-Chip data8.44□□□□□ -1.06not detected
AMF1YOR378W MEP1P40260 492 aa8.44□□□□□ -1.06
AMF1YOR378W PRM2P40534 656 aa8.44□□□□□ -1.06
AMF1YOR378W UBP6P43593 499 aaKnown RBP8.44□□□□□ -1.06
AMF1YOR378W LSM3P57743 89 aaKnown RBP8.44□□□□□ -1.06
AMF1YOR378W GOT1Q03554 138 aa8.44□□□□□ -1.06
AMF1YOR378W RPC11Q04307 110 aaPredicted RBP8.44□□□□□ -1.06
AMF1YOR378W RCO1Q04779 684 aa8.44□□□□□ -1.06
AMF1YOR378W YOL019WQ08157 551 aa8.44□□□□□ -1.06
AMF1YOR378W MEX67Q99257 599 aaKnown RBP8.44□□□□□ -1.06
AMF1YOR378W EXO70P19658 623 aa8.43□□□□□ -1.06
AMF1YOR378W PRP4P20053 465 aaKnown RBP8.43□□□□□ -1.06
AMF1YOR378W CLB1P24868 471 aa8.43□□□□□ -1.06
AMF1YOR378W NPP1P25353 742 aa8.43□□□□□ -1.06
AMF1YOR378W SNT1P25357 1226 aa8.43□□□□□ -1.06
AMF1YOR378W TOA1P32773 286 aa8.43□□□□□ -1.06
AMF1YOR378W PTH2P34222 208 aa8.43□□□□□ -1.06
AMF1YOR378W CTP1P38152 299 aa8.43□□□□□ -1.06
AMF1YOR378W IML3P38265 245 aa8.43□□□□□ -1.06
AMF1YOR378W YHR045WP38775 560 aa8.43□□□□□ -1.06
AMF1YOR378W BZZ1P38822 633 aa8.43□□□□□ -1.06
AMF1YOR378W SEC31P38968 1273 aaKnown RBP8.43□□□□□ -1.06
AMF1YOR378W YFR018CP43599 363 aa8.43□□□□□ -1.06
AMF1YOR378W RNR4P49723 345 aaKnown RBP8.43□□□□□ -1.06
AMF1YOR378W EFM5P53200 248 aaKnown RBP8.43□□□□□ -1.06
AMF1YOR378W AQR1P53943 586 aa8.43□□□□□ -1.06
AMF1YOR378W SLM2P53955 656 aa8.43□□□□□ -1.06
AMF1YOR378W TGL2P54857 326 aa8.43□□□□□ -1.06
AMF1YOR378W YMR102CQ03177 834 aa8.43□□□□□ -1.06
AMF1YOR378W SSL1Q04673 461 aaPredicted RBP8.43□□□□□ -1.06
AMF1YOR378W HDA3Q06623 655 aa8.43□□□□□ -1.06
AMF1YOR378W GNT1Q12096 491 aa8.43□□□□□ -1.06
AMF1YOR378W UPC2Q12151 913 aa8.43□□□□□ -1.06
AMF1YOR378W MCD1Q12158 566 aa8.43□□□□□ -1.06
AMF1YOR378W RIB2Q12362 591 aaKnown RBP8.43□□□□□ -1.06
AMF1YOR378W ERP5P38819 212 aa8.42□□□□□ -1.06
AMF1YOR378W FMO1P38866 432 aa8.42□□□□□ -1.06
AMF1YOR378W CYC2P38909 366 aa8.42□□□□□ -1.06
AMF1YOR378W SHU2P38957 223 aa8.42□□□□□ -1.06
AMF1YOR378W SSN3P39073 555 aa8.42□□□□□ -1.06
AMF1YOR378W PIK1P39104 1066 aa8.42□□□□□ -1.06
AMF1YOR378W COA1P40452 197 aa8.42□□□□□ -1.06
AMF1YOR378W YGL108CP53139 140 aa8.42□□□□□ -1.06
AMF1YOR378W NPY1P53164 384 aa8.42□□□□□ -1.06
AMF1YOR378W IBD2P53892 351 aa8.42□□□□□ -1.06
AMF1YOR378W CHL1P22516 861 aaPredicted RBP8.41□□□□□ -1.06
AMF1YOR378W PHO84P25297 587 aaKnown RBP8.41□□□□□ -1.06
AMF1YOR378W RFA2P26754 273 aaKnown RBP8.41□□□□□ -1.06
AMF1YOR378W MVD1P32377 396 aaKnown RBP8.41□□□□□ -1.06
AMF1YOR378W YPT52P36018 234 aaKnown RBP8.41□□□□□ -1.06
AMF1YOR378W EAP1P36041 632 aaKnown RBP8.41□□□□□ -1.06
AMF1YOR378W YKL151CP36059 337 aa8.41□□□□□ -1.06
AMF1YOR378W RFC3P38629 340 aa8.41□□□□□ -1.06
AMF1YOR378W UTP9P38882 575 aaKnown RBP8.41□□□□□ -1.06
AMF1YOR378W YRB1P41920 201 aaKnown RBP8.41□□□□□ -1.06
AMF1YOR378W MTO1P53070 669 aa8.41□□□□□ -1.06
AMF1YOR378W SPC24Q04477 213 aa8.41□□□□□ -1.06
AMF1YOR378W HPF1Q05164 967 aa8.41□□□□□ -1.06
AMF1YOR378W RSC3Q06639 885 aa8.41□□□□□ -1.06
AMF1YOR378W VAM6Q07468 1049 aa8.41□□□□□ -1.06
AMF1YOR378W ATG10Q07879 167 aa8.41□□□□□ -1.06
AMF1YOR378W OPI10Q08202 246 aa8.41□□□□□ -1.06
AMF1YOR378W AHA1Q12449 350 aaKnown RBP8.41□□□□□ -1.06
AMF1YOR378W SUC2P00724 532 aa8.4□□□□□ -1.06
AMF1YOR378W YKR104WP0CE69 306 aa8.4□□□□□ -1.06
AMF1YOR378W ART10P18634 518 aaKnown RBP8.4□□□□□ -1.06
AMF1YOR378W ARG1P22768 420 aa8.4□□□□□ -1.06
AMF1YOR378W NUP120P35729 1037 aa8.4□□□□□ -1.06
AMF1YOR378W GMH1P36125 273 aa8.4□□□□□ -1.06
AMF1YOR378W DSF2P38213 736 aa8.4□□□□□ -1.06
AMF1YOR378W TAE1P38340 232 aa8.4□□□□□ -1.06
AMF1YOR378W YHR020WP38708 688 aaKnown RBP8.4□□□□□ -1.06
AMF1YOR378W HSE1P38753 452 aa8.4□□□□□ -1.06
AMF1YOR378W DHH1P39517 506 aaKnown RBP8.4□□□□□ -1.06
AMF1YOR378W GAT1P43574 510 aa8.4□□□□□ -1.06
AMF1YOR378W FAA4P47912 694 aaKnown RBP8.4□□□□□ -1.06
AMF1YOR378W ART5P53244 586 aaKnown RBP8.4□□□□□ -1.06
AMF1YOR378W SHY1P53266 389 aa8.4□□□□□ -1.06
AMF1YOR378W SMA1Q02651 245 aa8.4□□□□□ -1.06
AMF1YOR378W FMN1Q03778 218 aa8.4□□□□□ -1.06
AMF1YOR378W ARX1Q03862 593 aaKnown RBP8.4□□□□□ -1.06
AMF1YOR378W TRM12Q04235 462 aa8.4□□□□□ -1.06
AMF1YOR378W Q0182Q9ZZW1 134 aa8.4□□□□□ -1.06
AMF1YOR378W RNA1P11745 407 aaKnown RBP8.39□□□□□ -1.07
AMF1YOR378W HOM2P13663 365 aaKnown RBP8.39□□□□□ -1.07
AMF1YOR378W RSR1P13856 272 aa8.39□□□□□ -1.07
AMF1YOR378W POL30P15873 258 aaKnown RBP8.39□□□□□ -1.07
AMF1YOR378W YKL100CP34248 587 aa8.39□□□□□ -1.07
AMF1YOR378W VMA13P41807 478 aaKnown RBP8.39□□□□□ -1.07
AMF1YOR378W DAN4P47179 1161 aa8.39□□□□□ -1.07
AMF1YOR378W GTR2P53290 341 aa8.39□□□□□ -1.07
AMF1YOR378W NOP19P53317 196 aaPredicted RBP8.39□□□□□ -1.07
AMF1YOR378W UBP2Q01476 1272 aa8.39□□□□□ -1.07
AMF1YOR378W LGE1Q02796 332 aaKnown RBP8.39□□□□□ -1.07
AMF1YOR378W EMI1Q04406 187 aa8.39□□□□□ -1.07
AMF1YOR378W ARG7Q04728 441 aa8.39□□□□□ -1.07
AMF1YOR378W HEL2Q05580 639 aaKnown RBP8.39□□□□□ -1.07
AMF1YOR378W ATG34Q12292 412 aa8.39□□□□□ -1.07
AMF1YOR378W RRP36Q12481 300 aaPredicted RBP8.39□□□□□ -1.07
AMF1YOR378W PHO5P00635 467 aa8.39□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 116.5 ms