RNA–Protein interactions for RNA: YOR089C

VPS21, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene VPS21, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS21YOR089C OTU2P38747 307 aaKnown RBP4.49□□□□□ -1.69
VPS21YOR089C UIP3P39547 235 aa4.49□□□□□ -1.69
VPS21YOR089C ROK1P45818 564 aaPredicted RBP4.49□□□□□ -1.69
VPS21YOR089C NNF2P53253 936 aa4.49□□□□□ -1.69
VPS21YOR089C YNR061CP53747 219 aa4.49□□□□□ -1.69
VPS21YOR089C VPS9P54787 451 aa4.49□□□□□ -1.69
VPS21YOR089C RSM28Q03430 361 aa4.49□□□□□ -1.69
VPS21YOR089C GPN2Q08726 347 aaPredicted RBP4.49□□□□□ -1.69
VPS21YOR089C FMP40Q08968 688 aaPredicted RBP4.49□□□□□ -1.69
VPS21YOR089C TAF3Q12297 353 aa4.49□□□□□ -1.69
VPS21YOR089C ISA2Q12425 185 aa4.49□□□□□ -1.69
VPS21YOR089C PDR11P40550 1411 aa4.48□□□□□ -1.69
VPS21YOR089C RPN13O13563 156 aa4.48□□□□□ -1.69
VPS21YOR089C RPC53P25441 422 aa4.48□□□□□ -1.69
VPS21YOR089C UBP13P38187 747 aa4.48□□□□□ -1.69
VPS21YOR089C VID24P38263 362 aa4.48□□□□□ -1.69
VPS21YOR089C DIA4P38705 446 aaPredicted RBP4.48□□□□□ -1.69
VPS21YOR089C SAP1P39955 897 aaKnown RBP4.48□□□□□ -1.69
VPS21YOR089C BUR6P40096 142 aa4.48□□□□□ -1.69
VPS21YOR089C DPB11P47027 764 aaPredicted RBP4.48□□□□□ -1.69
VPS21YOR089C DIA3P52290 468 aa4.48□□□□□ -1.69
VPS21YOR089C YGL117WP53133 265 aa4.48□□□□□ -1.69
VPS21YOR089C YGL036WP53185 909 aaPredicted RBP4.48□□□□□ -1.69
VPS21YOR089C YGR127WP53275 312 aa4.48□□□□□ -1.69
VPS21YOR089C RAD33Q04231 177 aa4.48□□□□□ -1.69
VPS21YOR089C GET3Q12154 354 aaKnown RBP4.48□□□□□ -1.69
VPS21YOR089C YPT6Q99260 215 aa4.48□□□□□ -1.69
VPS21YOR089C NUP188P52593 1655 aaKnown RBP4.48□□□□□ -1.69
VPS21YOR089C DNF2Q12675 1612 aa4.47□□□□□ -1.69
VPS21YOR089C RPL7AP05737 244 aaKnown RBP4.47□□□□□ -1.69
VPS21YOR089C PTC6P25646 442 aa4.47□□□□□ -1.69
VPS21YOR089C SRO77P38163 1010 aa4.47□□□□□ -1.69
VPS21YOR089C MUP3P38734 546 aa4.47□□□□□ -1.69
VPS21YOR089C LSM5P40089 93 aaKnown RBP4.47□□□□□ -1.69
VPS21YOR089C YJL068CP40363 299 aa4.47□□□□□ -1.69
VPS21YOR089C MET28P40573 187 aa4.47□□□□□ -1.69
VPS21YOR089C CCT7P42943 550 aaKnown RBP4.47□□□□□ -1.69
VPS21YOR089C FAR3P46671 204 aa4.47□□□□□ -1.69
VPS21YOR089C SMC3P47037 1230 aa4.47□□□□□ -1.69
VPS21YOR089C OGG1P53397 376 aaPredicted RBP4.47□□□□□ -1.69
VPS21YOR089C ADE16P54113 591 aaKnown RBP4.47□□□□□ -1.69
VPS21YOR089C ERO1Q03103 563 aa4.47□□□□□ -1.69
VPS21YOR089C TMN2Q04562 672 aa4.47□□□□□ -1.69
VPS21YOR089C VPS38Q05919 439 aa4.47□□□□□ -1.69
VPS21YOR089C MRN1Q08925 612 aaKnown RBP RIP-Chip data4.47□□□□□ -1.69not detected
VPS21YOR089C RPL7BQ12213 244 aaKnown RBP4.47□□□□□ -1.69
VPS21YOR089C GRX6Q12438 231 aa4.47□□□□□ -1.69
VPS21YOR089C AVL9Q12500 764 aa4.47□□□□□ -1.69
VPS21YOR089C PGA3Q12746 312 aaKnown RBP4.47□□□□□ -1.69
VPS21YOR089C IML1P47170 1584 aa4.46□□□□□ -1.7
VPS21YOR089C RAV1P47104 1357 aa4.46□□□□□ -1.7
VPS21YOR089C MF(ALPHA)1P01149 165 aa4.46□□□□□ -1.7
VPS21YOR089C BI2P03873 423 aa4.46□□□□□ -1.7
VPS21YOR089C SES1P07284 462 aaKnown RBP4.46□□□□□ -1.7
VPS21YOR089C OPI1P21957 404 aa4.46□□□□□ -1.7
VPS21YOR089C YSP3P25036 478 aa4.46□□□□□ -1.7
VPS21YOR089C SEF1P34228 1148 aa4.46□□□□□ -1.7
VPS21YOR089C SMF1P38925 575 aa4.46□□□□□ -1.7
VPS21YOR089C MET18P40469 1032 aa4.46□□□□□ -1.7
VPS21YOR089C SDS3P40505 327 aa4.46□□□□□ -1.7
VPS21YOR089C PKP1P40530 394 aa4.46□□□□□ -1.7
VPS21YOR089C SSU1P41930 458 aa4.46□□□□□ -1.7
VPS21YOR089C SWP82P43554 623 aa4.46□□□□□ -1.7
VPS21YOR089C IRC8P47046 822 aa4.46□□□□□ -1.7
VPS21YOR089C STB4P50104 949 aa4.46□□□□□ -1.7
VPS21YOR089C BOP3P53958 396 aa4.46□□□□□ -1.7
VPS21YOR089C MUK1Q02866 612 aa4.46□□□□□ -1.7
VPS21YOR089C RMT2Q03305 412 aa4.46□□□□□ -1.7
VPS21YOR089C LEA1Q08963 238 aaPredicted RBP4.46□□□□□ -1.7
VPS21YOR089C SPE4Q12455 300 aa4.46□□□□□ -1.7
VPS21YOR089C ARD1P07347 238 aaPredicted RBP4.45□□□□□ -1.7
VPS21YOR089C MRP2P10663 115 aaPredicted RBP4.45□□□□□ -1.7
VPS21YOR089C CLC1P17891 233 aa4.45□□□□□ -1.7
VPS21YOR089C PMA2P19657 947 aa4.45□□□□□ -1.7
VPS21YOR089C SRP54P20424 541 aaKnown RBP4.45□□□□□ -1.7
VPS21YOR089C RRP43P25359 394 aaPredicted RBP4.45□□□□□ -1.7
VPS21YOR089C ECM10P39987 644 aa4.45□□□□□ -1.7
VPS21YOR089C MIT1P40002 666 aa4.45□□□□□ -1.7
VPS21YOR089C DOT5P40553 215 aa4.45□□□□□ -1.7
VPS21YOR089C TDA10P42938 290 aa4.45□□□□□ -1.7
VPS21YOR089C YFL015CP43578 164 aa4.45□□□□□ -1.7
VPS21YOR089C ASN1P49089 572 aaKnown RBP4.45□□□□□ -1.7
VPS21YOR089C JJJ1P53863 590 aa4.45□□□□□ -1.7
VPS21YOR089C ZDS2P54786 942 aa4.45□□□□□ -1.7
VPS21YOR089C CIK1Q01649 594 aa4.45□□□□□ -1.7
VPS21YOR089C MAK10Q02197 733 aa4.45□□□□□ -1.7
VPS21YOR089C FIN1Q03898 291 aa4.45□□□□□ -1.7
VPS21YOR089C LUC7Q07508 261 aaPredicted RBP4.45□□□□□ -1.7
VPS21YOR089C ETT1Q08421 412 aaKnown RBP4.45□□□□□ -1.7
VPS21YOR089C BUD7Q08754 746 aa4.45□□□□□ -1.7
VPS21YOR089C ATG29Q12092 213 aa4.45□□□□□ -1.7
VPS21YOR089C INP53Q12271 1107 aa4.45□□□□□ -1.7
VPS21YOR089C HEM1P09950 548 aaPredicted RBP4.44□□□□□ -1.7
VPS21YOR089C PCT1P13259 424 aa4.44□□□□□ -1.7
VPS21YOR089C STE12P13574 688 aa4.44□□□□□ -1.7
VPS21YOR089C SAT4P25333 603 aaKnown RBP4.44□□□□□ -1.7
VPS21YOR089C UGP1P32861 499 aaKnown RBP4.44□□□□□ -1.7
VPS21YOR089C RPC34P32910 317 aa4.44□□□□□ -1.7
VPS21YOR089C CMC1P36064 111 aa4.44□□□□□ -1.7
VPS21YOR089C CST26P38226 397 aa4.44□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms