RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROD1YOR018W RIM2P38127 377 aa3.83□□□□□ -1.8
ROD1YOR018W DOT6P40059 670 aaKnown RBP3.83□□□□□ -1.8
ROD1YOR018W UBP6P43593 499 aaKnown RBP3.83□□□□□ -1.8
ROD1YOR018W RNR4P49723 345 aaKnown RBP3.83□□□□□ -1.8
ROD1YOR018W NBP35P52920 328 aa3.83□□□□□ -1.8
ROD1YOR018W MNT2P53059 558 aa3.83□□□□□ -1.8
ROD1YOR018W MRS2Q01926 470 aa3.83□□□□□ -1.8
ROD1YOR018W NOG1Q02892 647 aaKnown RBP3.83□□□□□ -1.8
ROD1YOR018W YET2Q04210 160 aa3.83□□□□□ -1.8
ROD1YOR018W SLF1Q12034 447 aaKnown RBP3.83□□□□□ -1.8
ROD1YOR018W PDH1Q12428 516 aaKnown RBP3.83□□□□□ -1.8
ROD1YOR018W RGS2Q99188 309 aa3.83□□□□□ -1.8
ROD1YOR018W PHO5P00635 467 aa3.83□□□□□ -1.8
ROD1YOR018W MSF1P08425 469 aa3.83□□□□□ -1.8
ROD1YOR018W SYN8P31377 255 aa3.83□□□□□ -1.8
ROD1YOR018W MRP21P38175 177 aa3.83□□□□□ -1.8
ROD1YOR018W YBR259WP38338 688 aa3.83□□□□□ -1.8
ROD1YOR018W ARP1P38696 384 aa3.83□□□□□ -1.8
ROD1YOR018W ALG8P40351 577 aa3.83□□□□□ -1.8
ROD1YOR018W PXA1P41909 870 aa3.83□□□□□ -1.8
ROD1YOR018W MRPS18P42847 217 aa3.83□□□□□ -1.8
ROD1YOR018W FAR3P46671 204 aa3.83□□□□□ -1.8
ROD1YOR018W HST3P53687 447 aa3.83□□□□□ -1.8
ROD1YOR018W ADE12P80210 433 aaKnown RBP3.83□□□□□ -1.8
ROD1YOR018W RNT1Q02555 471 aa3.83□□□□□ -1.8
ROD1YOR018W LEE1Q02799 301 aaKnown RBP3.83□□□□□ -1.8
ROD1YOR018W YDR338CQ05497 695 aa3.83□□□□□ -1.8
ROD1YOR018W LDB18Q07887 179 aa3.83□□□□□ -1.8
ROD1YOR018W YVC1Q12324 675 aa3.83□□□□□ -1.8
ROD1YOR018W KCS1Q12494 1050 aa3.83□□□□□ -1.8
ROD1YOR018W YMR084WA2P2R3 262 aa3.82□□□□□ -1.8
ROD1YOR018W PMA2P19657 947 aa3.82□□□□□ -1.8
ROD1YOR018W NPR1P22211 790 aa3.82□□□□□ -1.8
ROD1YOR018W MIH1P23748 554 aa3.82□□□□□ -1.8
ROD1YOR018W YSP3P25036 478 aa3.82□□□□□ -1.8
ROD1YOR018W HRR25P29295 494 aaKnown RBP3.82□□□□□ -1.8
ROD1YOR018W SEC31P38968 1273 aaKnown RBP3.82□□□□□ -1.8
ROD1YOR018W SSP120P39931 234 aaKnown RBP3.82□□□□□ -1.8
ROD1YOR018W IST3P40565 148 aaPredicted RBP3.82□□□□□ -1.8
ROD1YOR018W BUD13P46947 266 aaPredicted RBP3.82□□□□□ -1.8
ROD1YOR018W MRX6P48564 524 aa3.82□□□□□ -1.8
ROD1YOR018W YNR065CP53751 1116 aa3.82□□□□□ -1.8
ROD1YOR018W PEX13P80667 386 aa3.82□□□□□ -1.8
ROD1YOR018W TOF2Q02208 771 aa3.82□□□□□ -1.8
ROD1YOR018W EAR1Q03212 550 aa3.82□□□□□ -1.8
ROD1YOR018W GOT1Q03554 138 aa3.82□□□□□ -1.8
ROD1YOR018W OSW1Q08692 278 aa3.82□□□□□ -1.8
ROD1YOR018W NUS1Q12063 375 aa3.82□□□□□ -1.8
ROD1YOR018W GUK1P15454 187 aaKnown RBP3.82□□□□□ -1.8
ROD1YOR018W MEF1P25039 761 aa3.82□□□□□ -1.8
ROD1YOR018W RPC19P28000 142 aaKnown RBP3.82□□□□□ -1.8
ROD1YOR018W DEP1P31385 405 aa3.82□□□□□ -1.8
ROD1YOR018W HEM12P32347 362 aaPredicted RBP3.82□□□□□ -1.8
ROD1YOR018W IMP3P32899 183 aaPredicted RBP3.82□□□□□ -1.8
ROD1YOR018W LOS1P33418 1100 aaPredicted RBP3.82□□□□□ -1.8
ROD1YOR018W PTC1P35182 281 aa3.82□□□□□ -1.8
ROD1YOR018W NUP120P35729 1037 aa3.82□□□□□ -1.8
ROD1YOR018W MRPL40P36534 297 aa3.82□□□□□ -1.8
ROD1YOR018W EFM1P38732 585 aa3.82□□□□□ -1.8
ROD1YOR018W RGA1P39083 1007 aa3.82□□□□□ -1.8
ROD1YOR018W EXO1P39875 702 aa3.82□□□□□ -1.8
ROD1YOR018W RGI2P40188 164 aa3.82□□□□□ -1.8
ROD1YOR018W TY4A-JP47023 414 aa3.82□□□□□ -1.8
ROD1YOR018W RNH70P53331 553 aa3.82□□□□□ -1.8
ROD1YOR018W YNL143CP53908 130 aa3.82□□□□□ -1.8
ROD1YOR018W SLT2Q00772 484 aa3.82□□□□□ -1.8
ROD1YOR018W AAT1Q01802 451 aa3.82□□□□□ -1.8
ROD1YOR018W YPL014WQ02606 381 aa3.82□□□□□ -1.8
ROD1YOR018W SHE9Q04172 456 aa3.82□□□□□ -1.8
ROD1YOR018W RSC2Q06488 889 aa3.82□□□□□ -1.8
ROD1YOR018W HRK1Q08732 759 aaKnown RBP3.82□□□□□ -1.8
ROD1YOR018W YPL225WQ08971 146 aaKnown RBP3.82□□□□□ -1.8
ROD1YOR018W DAP1Q12091 152 aa3.82□□□□□ -1.8
ROD1YOR018W HOS1Q12214 470 aa3.82□□□□□ -1.8
ROD1YOR018W GAL11P19659 1081 aa3.81□□□□□ -1.8
ROD1YOR018W MVD1P32377 396 aaKnown RBP3.81□□□□□ -1.8
ROD1YOR018W SET3P36124 751 aa3.81□□□□□ -1.8
ROD1YOR018W LDB7P38210 180 aa3.81□□□□□ -1.8
ROD1YOR018W CRP1P38845 465 aaKnown RBP3.81□□□□□ -1.8
ROD1YOR018W YHR182WP38870 785 aa3.81□□□□□ -1.8
ROD1YOR018W SHU2P38957 223 aa3.81□□□□□ -1.8
ROD1YOR018W ACO2P39533 789 aa3.81□□□□□ -1.8
ROD1YOR018W SPF1P39986 1215 aaKnown RBP3.81□□□□□ -1.8
ROD1YOR018W GTS1P40956 396 aa3.81□□□□□ -1.8
ROD1YOR018W OYE3P41816 400 aaPredicted RBP3.81□□□□□ -1.8
ROD1YOR018W GAT1P43574 510 aa3.81□□□□□ -1.8
ROD1YOR018W GLG2P47011 380 aa3.81□□□□□ -1.8
ROD1YOR018W YJR154WP47181 346 aa3.81□□□□□ -1.8
ROD1YOR018W COG7P53195 279 aa3.81□□□□□ -1.8
ROD1YOR018W YNR061CP53747 219 aa3.81□□□□□ -1.8
ROD1YOR018W REX2P54964 269 aaKnown RBP3.81□□□□□ -1.8
ROD1YOR018W OSH6Q02201 448 aa3.81□□□□□ -1.8
ROD1YOR018W ECM9Q02202 377 aa3.81□□□□□ -1.8
ROD1YOR018W HDA2Q06629 674 aa3.81□□□□□ -1.8
ROD1YOR018W IRC10Q08118 586 aa3.81□□□□□ -1.8
ROD1YOR018W DIA2Q08496 732 aaPredicted RBP3.81□□□□□ -1.8
ROD1YOR018W SPE4Q12455 300 aa3.81□□□□□ -1.8
ROD1YOR018W UBR1P19812 1950 aa3.81□□□□□ -1.8
ROD1YOR018W RAD3P06839 778 aa3.81□□□□□ -1.8
ROD1YOR018W CLB1P24868 471 aa3.81□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms