RNA–Protein interactions for RNA: YNR031C

SSK2, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeast

Gene SSK2, Length 4,740 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSK2	YNR031C	YMR321C	Q04898	105 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	COA4	Q05809	96 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	YPR078C	Q06813	372 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	COS7	Q07788	383 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	SLK19	Q08581	821 aa	Known RBP	1.5	□□□□□ -2.17
SSK2	YNR031C	ESA1	Q08649	445 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	RTT10	Q08924	1013 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	FLC1	Q08967	793 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	YPL225W	Q08971	146 aa	Known RBP	1.5	□□□□□ -2.17
SSK2	YNR031C	HOS1	Q12214	470 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	SVS1	Q12254	260 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	NTO1	Q12311	748 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	SMC6	Q12749	1114 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	PRB1	P09232	635 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	RPS18A	P0CX55	146 aa	Known RBP	1.5	□□□□□ -2.17
SSK2	YNR031C	RPS18B	P0CX56	146 aa	Predicted RBP	1.5	□□□□□ -2.17
SSK2	YNR031C	INO1	P11986	533 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	DAL82	P21705	255 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	AMS1	P22855	1083 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	SPB1	P25582	841 aa	Predicted RBP	1.5	□□□□□ -2.17
SSK2	YNR031C	URA7	P28274	579 aa	Known RBP	1.5	□□□□□ -2.17
SSK2	YNR031C	CYS3	P31373	394 aa	Known RBP	1.5	□□□□□ -2.17
SSK2	YNR031C	MET4	P32389	672 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	UTR4	P32626	227 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	1.5	□□□□□ -2.17	not detected
SSK2	YNR031C	TPO5	P36029	618 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	ATG12	P38316	186 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	PAN5	P38787	379 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	MSS4	P38994	779 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	MBP1	P39678	833 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	RBG1	P39729	369 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	MTW1	P39731	289 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	EXO1	P39875	702 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	LSM5	P40089	93 aa	Known RBP	1.5	□□□□□ -2.17
SSK2	YNR031C	YMR147W	P40218	223 aa	Known RBP	1.5	□□□□□ -2.17
SSK2	YNR031C	DPH1	P40487	425 aa	Known RBP	1.5	□□□□□ -2.17
SSK2	YNR031C	ASE1	P50275	885 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	BIO3	P50277	480 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	MPS2	P53159	387 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	MNT4	P53745	580 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	NCS2	P53923	493 aa	Predicted RBP	1.5	□□□□□ -2.17
SSK2	YNR031C	CEG1	Q01159	459 aa	Predicted RBP	1.5	□□□□□ -2.17
SSK2	YNR031C	MZM1	Q03429	123 aa	Predicted RBP	1.5	□□□□□ -2.17
SSK2	YNR031C	NHP10	Q03435	203 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	SND1	Q04007	877 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	YET2	Q04210	160 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	SPC24	Q04477	213 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	GLO2	Q05584	274 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	YLR345W	Q06137	509 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	MRI1	Q06489	411 aa	Known RBP	1.5	□□□□□ -2.17
SSK2	YNR031C	CYK3	Q07533	885 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	AAD4	Q07747	329 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	CRT10	Q08226	957 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	AAD15	Q08361	143 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	BUD7	Q08754	746 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	YOR223W	Q12015	292 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	COX17	Q12287	69 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	MED4	Q12343	284 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	RMP1	Q12530	201 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	YBR255C-A	Q3E776	120 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	MED11	Q99278	115 aa		1.5	□□□□□ -2.17
SSK2	YNR031C	TDH1	P00360	332 aa	Known RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	PGK1	P00560	416 aa	Known RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	SSC1	P0CS90	654 aa	Known RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	SAM2	P19358	384 aa	Known RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	CNS1	P33313	385 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	MDJ1	P35191	511 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	PCH2	P38126	564 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	PPS1	P38148	807 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	PHO88	P38264	188 aa	Predicted RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	YIL077C	P40508	320 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	AGE2	P40529	298 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	TRF5	P48561	642 aa	Known RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	GNP1	P48813	663 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	FMS1	P50264	508 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	MAL11	P53048	616 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	ZIP2	P53061	704 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	1.49	□□□□□ -2.17	not detected
SSK2	YNR031C	GRX5	Q02784	150 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	ROD1	Q02805	837 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	YMR010W	Q03687	405 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	ECM11	Q04110	302 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	ARG7	Q04728	441 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	SPN1	Q06505	410 aa	Predicted RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	GRS2	Q06817	618 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	MDM12	Q92328	271 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	IRA2	P19158	3079 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	TRP3	P00937	484 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	SCEI	P03882	235 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	CYT1	P07143	309 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	TCP1	P12612	559 aa	Known RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	ABF1	P14164	731 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	RGR1	P19263	1082 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	RNR3	P21672	869 aa	Known RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	ERG6	P25087	383 aa	Known RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	KTR1	P27810	393 aa	Known RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	PRR1	P28708	518 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	EFT1	P32324	842 aa	Known RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	VMA8	P32610	256 aa	Known RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	STE13	P33894	931 aa		1.49	□□□□□ -2.17

Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms