RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeastyeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS27YNR006W RPL3P14126 387 aaKnown RBP3.95□□□□□ -1.78
VPS27YNR006W PRD1P25375 712 aa3.95□□□□□ -1.78
VPS27YNR006W YME2P32843 850 aa3.95□□□□□ -1.78
VPS27YNR006W AGP2P38090 596 aa3.95□□□□□ -1.78
VPS27YNR006W SLM4P38247 162 aa3.95□□□□□ -1.78
VPS27YNR006W YHR131CP38835 850 aa3.95□□□□□ -1.78
VPS27YNR006W HRB1P38922 454 aaKnown RBP RIP-Chip data3.95□□□□□ -1.78not detected
VPS27YNR006W SMC3P47037 1230 aa3.95□□□□□ -1.78
VPS27YNR006W FMS1P50264 508 aa3.95□□□□□ -1.78
VPS27YNR006W VID30P53076 958 aa3.95□□□□□ -1.78
VPS27YNR006W MLC1P53141 149 aa3.95□□□□□ -1.78
VPS27YNR006W MNP1P53163 194 aaPredicted RBP3.95□□□□□ -1.78
VPS27YNR006W DCI1Q08558 271 aa3.95□□□□□ -1.78
VPS27YNR006W RTC5Q12108 567 aaKnown RBP3.95□□□□□ -1.78
VPS27YNR006W ARO3P14843 370 aaKnown RBP3.94□□□□□ -1.78
VPS27YNR006W YBR053CP38235 358 aa3.94□□□□□ -1.78
VPS27YNR006W CHS6P40955 746 aa3.94□□□□□ -1.78
VPS27YNR006W MPS3P47069 682 aa3.94□□□□□ -1.78
VPS27YNR006W RPS7BP48164 190 aaKnown RBP3.94□□□□□ -1.78
VPS27YNR006W APT1P49435 187 aaKnown RBP3.94□□□□□ -1.78
VPS27YNR006W MUP1P50276 574 aa3.94□□□□□ -1.78
VPS27YNR006W RHO5P53879 331 aaKnown RBP3.94□□□□□ -1.78
VPS27YNR006W YAT1P80235 687 aa3.94□□□□□ -1.78
VPS27YNR006W TOF2Q02208 771 aa3.94□□□□□ -1.78
VPS27YNR006W YMR111CQ04461 462 aaPredicted RBP3.94□□□□□ -1.78
VPS27YNR006W VTA1Q06263 330 aa3.94□□□□□ -1.78
VPS27YNR006W CRN1Q06440 651 aa3.94□□□□□ -1.78
VPS27YNR006W TRM13Q12383 476 aa3.94□□□□□ -1.78
VPS27YNR006W SEC39Q12745 709 aa3.94□□□□□ -1.78
VPS27YNR006W PMA1P05030 918 aaKnown RBP3.94□□□□□ -1.78
VPS27YNR006W MRP13P12686 339 aa3.94□□□□□ -1.78
VPS27YNR006W KGD1P20967 1014 aaKnown RBP3.94□□□□□ -1.78
VPS27YNR006W PDE1P22434 369 aa3.94□□□□□ -1.78
VPS27YNR006W IDH2P28241 369 aaKnown RBP3.94□□□□□ -1.78
VPS27YNR006W YDR089WP38966 869 aa3.94□□□□□ -1.78
VPS27YNR006W PIG2P40187 538 aa3.94□□□□□ -1.78
VPS27YNR006W PKP1P40530 394 aa3.94□□□□□ -1.78
VPS27YNR006W YIR042CP40586 236 aa3.94□□□□□ -1.78
VPS27YNR006W AMA1P50082 593 aa3.94□□□□□ -1.78
VPS27YNR006W CUE3P53137 624 aaKnown RBP3.94□□□□□ -1.78
VPS27YNR006W MAK10Q02197 733 aa3.94□□□□□ -1.78
VPS27YNR006W MRI1Q06489 411 aaKnown RBP3.94□□□□□ -1.78
VPS27YNR006W FMP40Q08968 688 aaPredicted RBP3.94□□□□□ -1.78
VPS27YNR006W UBX3Q12229 455 aa3.94□□□□□ -1.78
VPS27YNR006W PDA1P16387 420 aaKnown RBP3.93□□□□□ -1.78
VPS27YNR006W CLC1P17891 233 aa3.93□□□□□ -1.78
VPS27YNR006W SRP54P20424 541 aaKnown RBP3.93□□□□□ -1.78
VPS27YNR006W APN1P22936 367 aa3.93□□□□□ -1.78
VPS27YNR006W AFG1P32317 509 aa3.93□□□□□ -1.78
VPS27YNR006W CDC5P32562 705 aa3.93□□□□□ -1.78
VPS27YNR006W SSE1P32589 693 aaKnown RBP3.93□□□□□ -1.78
VPS27YNR006W VPS17P32913 551 aa3.93□□□□□ -1.78
VPS27YNR006W SRB2P34162 210 aa3.93□□□□□ -1.78
VPS27YNR006W SGS1P35187 1447 aa3.93□□□□□ -1.78
VPS27YNR006W SEC31P38968 1273 aaKnown RBP3.93□□□□□ -1.78
VPS27YNR006W ELO3P40319 345 aa3.93□□□□□ -1.78
VPS27YNR006W MKT1P40850 830 aaKnown RBP3.93□□□□□ -1.78
VPS27YNR006W IRC8P47046 822 aa3.93□□□□□ -1.78
VPS27YNR006W PHO23P50947 330 aa3.93□□□□□ -1.78
VPS27YNR006W SHE10P53075 577 aa3.93□□□□□ -1.78
VPS27YNR006W RPN14P53196 417 aa3.93□□□□□ -1.78
VPS27YNR006W RIA1P53893 1110 aa3.93□□□□□ -1.78
VPS27YNR006W DAK1P54838 584 aaKnown RBP3.93□□□□□ -1.78
VPS27YNR006W FIN1Q03898 291 aa3.93□□□□□ -1.78
VPS27YNR006W DLT1Q04216 342 aa3.93□□□□□ -1.78
VPS27YNR006W TAP42Q04372 366 aa3.93□□□□□ -1.78
VPS27YNR006W YER175W-AQ8TGU4 54 aa3.93□□□□□ -1.78
VPS27YNR006W MF(ALPHA)1P01149 165 aa3.92□□□□□ -1.78
VPS27YNR006W HIP1P06775 603 aa3.92□□□□□ -1.78
VPS27YNR006W CRM1P30822 1084 aaKnown RBP3.92□□□□□ -1.78
VPS27YNR006W SSE2P32590 693 aaKnown RBP3.92□□□□□ -1.78
VPS27YNR006W MIC60P36112 540 aa3.92□□□□□ -1.78
VPS27YNR006W NTR2P36118 322 aaPredicted RBP3.92□□□□□ -1.78
VPS27YNR006W AFG3P39925 761 aa3.92□□□□□ -1.78
VPS27YNR006W ECM27P47144 725 aa3.92□□□□□ -1.78
VPS27YNR006W MSE1P48525 536 aa3.92□□□□□ -1.78
VPS27YNR006W YNL092WP53934 400 aa3.92□□□□□ -1.78
VPS27YNR006W RPS15Q01855 142 aaKnown RBP3.92□□□□□ -1.78
VPS27YNR006W CFT2Q12102 859 aaPredicted RBP3.92□□□□□ -1.78
VPS27YNR006W PCT1P13259 424 aa3.92□□□□□ -1.78
VPS27YNR006W VMA16P23968 213 aa3.92□□□□□ -1.78
VPS27YNR006W PHO91P27514 894 aa3.92□□□□□ -1.78
VPS27YNR006W CDC15P27636 974 aa3.92□□□□□ -1.78
VPS27YNR006W MVD1P32377 396 aaKnown RBP3.92□□□□□ -1.78
VPS27YNR006W HCS1P34243 683 aa3.92□□□□□ -1.78
VPS27YNR006W PIM1P36775 1133 aa3.92□□□□□ -1.78
VPS27YNR006W MLH1P38920 769 aa3.92□□□□□ -1.78
VPS27YNR006W ALG5P40350 334 aa3.92□□□□□ -1.78
VPS27YNR006W ALK1P43633 760 aaKnown RBP3.92□□□□□ -1.78
VPS27YNR006W NPA3P47122 385 aa3.92□□□□□ -1.78
VPS27YNR006W MSY1P48527 492 aa3.92□□□□□ -1.78
VPS27YNR006W IPI3P53877 555 aa3.92□□□□□ -1.78
VPS27YNR006W EFM6P53970 246 aa3.92□□□□□ -1.78
VPS27YNR006W VTC3Q02725 835 aa3.92□□□□□ -1.78
VPS27YNR006W ABZ2Q03266 374 aa3.92□□□□□ -1.78
VPS27YNR006W ACL4Q03771 387 aa3.92□□□□□ -1.78
VPS27YNR006W PPM1Q04081 328 aa3.92□□□□□ -1.78
VPS27YNR006W RTT109Q07794 436 aa3.92□□□□□ -1.78
VPS27YNR006W FRE3Q08905 711 aa3.92□□□□□ -1.78
VPS27YNR006W COX1P00401 534 aa3.91□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 32.4 ms