RNA–Protein interactions for RNA: YMR296C

LCB1, Transcript of Component of serine palmitoyltransferase, yeast

Gene LCB1, Length 1,677 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCB1	YMR296C	GIP4	P39732	760 aa		11.33	□□□□□ -0.6
LCB1	YMR296C	YJR061W	P40355	935 aa		11.33	□□□□□ -0.6
LCB1	YMR296C	SER33	P40510	469 aa		11.33	□□□□□ -0.6
LCB1	YMR296C	DIM1	P41819	318 aa	Known RBP	11.33	□□□□□ -0.6
LCB1	YMR296C	REF2	P42073	533 aa	Predicted RBP	11.33	□□□□□ -0.6
LCB1	YMR296C	EMC4	P53073	190 aa		11.33	□□□□□ -0.6
LCB1	YMR296C	ARI1	P53111	347 aa	Known RBP	11.33	□□□□□ -0.6
LCB1	YMR296C	IPI3	P53877	555 aa		11.33	□□□□□ -0.6
LCB1	YMR296C	CDC14	Q00684	551 aa		11.33	□□□□□ -0.6
LCB1	YMR296C	SEC10	Q06245	871 aa		11.33	□□□□□ -0.6
LCB1	YMR296C	HDA3	Q06623	655 aa		11.33	□□□□□ -0.6
LCB1	YMR296C	CCR4	P31384	837 aa	Known RBP	11.33	□□□□□ -0.6
LCB1	YMR296C	VRP1	P37370	817 aa		11.33	□□□□□ -0.6
LCB1	YMR296C	PDX3	P38075	228 aa	Known RBP	11.33	□□□□□ -0.6
LCB1	YMR296C	PAN6	P40459	309 aa		11.33	□□□□□ -0.6
LCB1	YMR296C	REG1	Q00816	1014 aa		11.33	□□□□□ -0.6
LCB1	YMR296C	NUP100	Q02629	959 aa		11.33	□□□□□ -0.6
LCB1	YMR296C	CRN1	Q06440	651 aa		11.33	□□□□□ -0.6
LCB1	YMR296C	YIG1	Q08956	461 aa		11.33	□□□□□ -0.6
LCB1	YMR296C	UBX3	Q12229	455 aa		11.33	□□□□□ -0.6
LCB1	YMR296C	ART10	P18634	518 aa	Known RBP	11.32	□□□□□ -0.6
LCB1	YMR296C	CLN1	P20437	546 aa		11.32	□□□□□ -0.6
LCB1	YMR296C	MRPS28	P21771	286 aa		11.32	□□□□□ -0.6
LCB1	YMR296C	ZIP1	P31111	875 aa		11.32	□□□□□ -0.6
LCB1	YMR296C	LIP5	P32875	414 aa		11.32	□□□□□ -0.6
LCB1	YMR296C	YHL041W	P38730	149 aa		11.32	□□□□□ -0.6
LCB1	YMR296C	IST3	P40565	148 aa	Predicted RBP	11.32	□□□□□ -0.6
LCB1	YMR296C	STR3	P53101	465 aa	Known RBP	11.32	□□□□□ -0.6
LCB1	YMR296C	YDR131C	Q03899	556 aa		11.32	□□□□□ -0.6
LCB1	YMR296C	TRE2	Q08693	809 aa		11.32	□□□□□ -0.6
LCB1	YMR296C	MDY2	Q12285	212 aa		11.32	□□□□□ -0.6
LCB1	YMR296C	TUB1	P09733	447 aa	Known RBP	11.31	□□□□□ -0.6
LCB1	YMR296C	TRX2	P22803	104 aa	Known RBP	11.31	□□□□□ -0.6
LCB1	YMR296C	MAP2	P38174	421 aa	Known RBP	11.31	□□□□□ -0.6
LCB1	YMR296C	RIM11	P38615	370 aa		11.31	□□□□□ -0.6
LCB1	YMR296C	SEC27	P41811	889 aa	Known RBP	11.31	□□□□□ -0.6
LCB1	YMR296C	MNT2	P53059	558 aa		11.31	□□□□□ -0.6
LCB1	YMR296C	LSM3	P57743	89 aa	Known RBP	11.31	□□□□□ -0.6
LCB1	YMR296C	RPN9	Q04062	393 aa	Known RBP	11.31	□□□□□ -0.6
LCB1	YMR296C	ATG26	Q06321	1198 aa		11.31	□□□□□ -0.6
LCB1	YMR296C	YEH2	Q07950	538 aa		11.31	□□□□□ -0.6
LCB1	YMR296C	ESA1	Q08649	445 aa		11.31	□□□□□ -0.6
LCB1	YMR296C	LEU1	P07264	779 aa	Known RBP	11.3	□□□□□ -0.6
LCB1	YMR296C	SCH9	P11792	824 aa	Known RBP	11.3	□□□□□ -0.6
LCB1	YMR296C	AEP1	P32493	518 aa		11.3	□□□□□ -0.6
LCB1	YMR296C	YHB1	P39676	399 aa	Known RBP	11.3	□□□□□ -0.6
LCB1	YMR296C	PEX8	P53248	589 aa		11.3	□□□□□ -0.6
LCB1	YMR296C	AQR1	P53943	586 aa		11.3	□□□□□ -0.6
LCB1	YMR296C	RMI1	Q02685	241 aa		11.3	□□□□□ -0.6
LCB1	YMR296C	CLU1	Q03690	1277 aa	Known RBP	11.3	□□□□□ -0.6
LCB1	YMR296C	JIP5	Q06214	492 aa	Predicted RBP	11.3	□□□□□ -0.6
LCB1	YMR296C	AMD1	P15274	810 aa	Known RBP	11.3	□□□□□ -0.6
LCB1	YMR296C	MNE1	P24720	663 aa		11.3	□□□□□ -0.6
LCB1	YMR296C	YCR090C	P25654	182 aa	Known RBP	11.3	□□□□□ -0.6
LCB1	YMR296C	ARN1	P38731	627 aa		11.3	□□□□□ -0.6
LCB1	YMR296C	CCT7	P42943	550 aa	Known RBP	11.3	□□□□□ -0.6
LCB1	YMR296C	YNL010W	P53981	241 aa	Known RBP	11.3	□□□□□ -0.6
LCB1	YMR296C	PET117	Q02771	107 aa		11.3	□□□□□ -0.6
LCB1	YMR296C	YPR114W	Q06107	315 aa		11.3	□□□□□ -0.6
LCB1	YMR296C	NKP1	Q12493	238 aa		11.3	□□□□□ -0.6
LCB1	YMR296C	UBR1	P19812	1950 aa		11.29	□□□□□ -0.6
LCB1	YMR296C	NMT1	P14743	455 aa		11.29	□□□□□ -0.6
LCB1	YMR296C	YSP3	P25036	478 aa		11.29	□□□□□ -0.6
LCB1	YMR296C	RML2	P32611	393 aa		11.29	□□□□□ -0.6
LCB1	YMR296C	DCW1	P36091	449 aa		11.29	□□□□□ -0.6
LCB1	YMR296C	YKR078W	P36158	585 aa	Known RBP	11.29	□□□□□ -0.6
LCB1	YMR296C	BUD13	P46947	266 aa	Predicted RBP	11.29	□□□□□ -0.6
LCB1	YMR296C	GLG2	P47011	380 aa		11.29	□□□□□ -0.6
LCB1	YMR296C	NOP9	P47077	666 aa	Known RBP	11.29	□□□□□ -0.6
LCB1	YMR296C	SLM2	P53955	656 aa		11.29	□□□□□ -0.6
LCB1	YMR296C	SPO19	Q03029	223 aa		11.29	□□□□□ -0.6
LCB1	YMR296C	HEL2	Q05580	639 aa	Known RBP	11.29	□□□□□ -0.6
LCB1	YMR296C	LDB18	Q07887	179 aa		11.29	□□□□□ -0.6
LCB1	YMR296C	MCH5	Q08777	521 aa		11.29	□□□□□ -0.6
LCB1	YMR296C	ADF1	Q2V2Q1	113 aa		11.29	□□□□□ -0.6
LCB1	YMR296C	HSH49	Q99181	213 aa	Predicted RBP	11.29	□□□□□ -0.6
LCB1	YMR296C	YLR149C	Q99296	730 aa		11.29	□□□□□ -0.6
LCB1	YMR296C	RBK1	P25332	333 aa		11.28	□□□□□ -0.6
LCB1	YMR296C	YCR099C	P25657	155 aa		11.28	□□□□□ -0.6
LCB1	YMR296C	TFC1	P32367	649 aa		11.28	□□□□□ -0.6
LCB1	YMR296C	PTM1	P32857	523 aa		11.28	□□□□□ -0.6
LCB1	YMR296C	PTH2	P34222	208 aa		11.28	□□□□□ -0.6
LCB1	YMR296C	MUP3	P38734	546 aa		11.28	□□□□□ -0.6
LCB1	YMR296C	COA1	P40452	197 aa		11.28	□□□□□ -0.6
LCB1	YMR296C	YJR124C	P47159	448 aa		11.28	□□□□□ -0.6
LCB1	YMR296C	YJR154W	P47181	346 aa		11.28	□□□□□ -0.6
LCB1	YMR296C	PRP3	Q03338	469 aa	Predicted RBP	11.28	□□□□□ -0.6
LCB1	YMR296C	RPC11	Q04307	110 aa	Predicted RBP	11.28	□□□□□ -0.6
LCB1	YMR296C	NUS1	Q12063	375 aa		11.28	□□□□□ -0.6
LCB1	YMR296C	SEC53	P07283	254 aa	Known RBP	11.27	□□□□□ -0.6
LCB1	YMR296C	PMA2	P19657	947 aa		11.27	□□□□□ -0.6
LCB1	YMR296C	URA4	P20051	364 aa		11.27	□□□□□ -0.6
LCB1	YMR296C	PMT1	P33775	817 aa		11.27	□□□□□ -0.6
LCB1	YMR296C	HAT2	P39984	401 aa		11.27	□□□□□ -0.6
LCB1	YMR296C	DAN4	P47179	1161 aa		11.27	□□□□□ -0.6
LCB1	YMR296C	SAP4	P53036	818 aa		11.27	□□□□□ -0.6
LCB1	YMR296C	RSC4	Q02206	625 aa		11.27	□□□□□ -0.6
LCB1	YMR296C	GAS3	Q03655	524 aa		11.27	□□□□□ -0.6
LCB1	YMR296C	TAF12	Q03761	539 aa		11.27	□□□□□ -0.6
LCB1	YMR296C	DYN3	Q04949	312 aa		11.27	□□□□□ -0.6

Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms