RNA–Protein interactions for RNA: YML041C

VPS71, Transcript of Nucleosome-binding component of the SWR1 complex, yeast

Gene VPS71, Length 843 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS71	YML041C	HEM1	P09950	548 aa	Predicted RBP	4.62	□□□□□ -1.67
VPS71	YML041C	PRD1	P25375	712 aa		4.62	□□□□□ -1.67
VPS71	YML041C	PUP3	P25451	205 aa	Known RBP	4.62	□□□□□ -1.67
VPS71	YML041C	SSE2	P32590	693 aa	Known RBP	4.62	□□□□□ -1.67
VPS71	YML041C	ANP1	P32629	500 aa		4.62	□□□□□ -1.67
VPS71	YML041C	VID24	P38263	362 aa		4.62	□□□□□ -1.67
VPS71	YML041C	OTU2	P38747	307 aa	Known RBP	4.62	□□□□□ -1.67
VPS71	YML041C	LTP1	P40347	161 aa		4.62	□□□□□ -1.67
VPS71	YML041C	CIN1	P40987	1014 aa		4.62	□□□□□ -1.67
VPS71	YML041C	YFR020W	P43600	232 aa		4.62	□□□□□ -1.67
VPS71	YML041C	RPS7B	P48164	190 aa	Known RBP	4.62	□□□□□ -1.67
VPS71	YML041C	BUD22	Q04347	519 aa	Known RBP	4.62	□□□□□ -1.67
VPS71	YML041C	YLR345W	Q06137	509 aa		4.62	□□□□□ -1.67
VPS71	YML041C	YLR455W	Q06188	304 aa		4.62	□□□□□ -1.67
VPS71	YML041C	THI3	Q07471	609 aa		4.62	□□□□□ -1.67
VPS71	YML041C	RDL1	Q12305	139 aa	Known RBP	4.62	□□□□□ -1.67
VPS71	YML041C	HIF1	Q12373	385 aa		4.62	□□□□□ -1.67
VPS71	YML041C	PNS1	Q12412	539 aa		4.62	□□□□□ -1.67
VPS71	YML041C	MF(ALPHA)1	P01149	165 aa		4.61	□□□□□ -1.67
VPS71	YML041C	HXK2	P04807	486 aa	Known RBP	4.61	□□□□□ -1.67
VPS71	YML041C	VMA16	P23968	213 aa		4.61	□□□□□ -1.67
VPS71	YML041C	WBP1	P33767	430 aa	Known RBP	4.61	□□□□□ -1.67
VPS71	YML041C	FTH1	P38310	465 aa		4.61	□□□□□ -1.67
VPS71	YML041C	ELO1	P39540	310 aa		4.61	□□□□□ -1.67
VPS71	YML041C	SSU1	P41930	458 aa		4.61	□□□□□ -1.67
VPS71	YML041C	VID30	P53076	958 aa		4.61	□□□□□ -1.67
VPS71	YML041C	BOP3	P53958	396 aa		4.61	□□□□□ -1.67
VPS71	YML041C	MEH1	Q02205	184 aa		4.61	□□□□□ -1.67
VPS71	YML041C	VPS38	Q05919	439 aa		4.61	□□□□□ -1.67
VPS71	YML041C	MRD1	Q06106	887 aa	Known RBP	4.61	□□□□□ -1.67
VPS71	YML041C	AVL9	Q12500	764 aa		4.61	□□□□□ -1.67
VPS71	YML041C	YLR111W	Q12528	110 aa		4.61	□□□□□ -1.67
VPS71	YML041C	CLC1	P17891	233 aa		4.6	□□□□□ -1.67
VPS71	YML041C	STE50	P25344	346 aa		4.6	□□□□□ -1.67
VPS71	YML041C	SNT1	P25357	1226 aa		4.6	□□□□□ -1.67
VPS71	YML041C	ELO2	P25358	347 aa		4.6	□□□□□ -1.67
VPS71	YML041C	ADK2	P26364	225 aa		4.6	□□□□□ -1.67
VPS71	YML041C	GPI10	P30777	616 aa		4.6	□□□□□ -1.67
VPS71	YML041C	SEC66	P33754	206 aa		4.6	□□□□□ -1.67
VPS71	YML041C	YBR144C	P34215	104 aa		4.6	□□□□□ -1.67
VPS71	YML041C	TCD2	P36101	447 aa	Known RBP	4.6	□□□□□ -1.67
VPS71	YML041C	RFC1	P38630	861 aa	Known RBP	4.6	□□□□□ -1.67
VPS71	YML041C	SMC3	P47037	1230 aa		4.6	□□□□□ -1.67
VPS71	YML041C	IRC8	P47046	822 aa		4.6	□□□□□ -1.67
VPS71	YML041C	HOS2	P53096	452 aa	Predicted RBP	4.6	□□□□□ -1.67
VPS71	YML041C	YGR016W	P53209	190 aa		4.6	□□□□□ -1.67
VPS71	YML041C	APM1	Q00776	475 aa	Predicted RBP	4.6	□□□□□ -1.67
VPS71	YML041C	RQC1	Q05468	723 aa	Known RBP	4.6	□□□□□ -1.67
VPS71	YML041C	FMP40	Q08968	688 aa	Predicted RBP	4.6	□□□□□ -1.67
VPS71	YML041C	ISN1	Q99312	450 aa		4.6	□□□□□ -1.67
VPS71	YML041C	ILS1	P09436	1072 aa	Known RBP	4.59	□□□□□ -1.67
VPS71	YML041C	MRP2	P10663	115 aa	Predicted RBP	4.59	□□□□□ -1.67
VPS71	YML041C	MRP13	P12686	339 aa		4.59	□□□□□ -1.67
VPS71	YML041C	KRR1	P25586	316 aa	Predicted RBP	4.59	□□□□□ -1.67
VPS71	YML041C	ADY2	P25613	283 aa		4.59	□□□□□ -1.67
VPS71	YML041C	ECM32	P32644	1121 aa	Known RBP	4.59	□□□□□ -1.67
VPS71	YML041C	YJL043W	P47053	257 aa		4.59	□□□□□ -1.67
VPS71	YML041C	DIA3	P52290	468 aa		4.59	□□□□□ -1.67
VPS71	YML041C	AAT1	Q01802	451 aa		4.59	□□□□□ -1.67
VPS71	YML041C	MSC1	Q03104	513 aa		4.59	□□□□□ -1.67
VPS71	YML041C	PIG1	Q06216	648 aa		4.59	□□□□□ -1.67
VPS71	YML041C	BSP1	Q06604	576 aa		4.59	□□□□□ -1.67
VPS71	YML041C	ETT1	Q08421	412 aa	Known RBP	4.59	□□□□□ -1.67
VPS71	YML041C	YER145C-A	A0A023PYF4	145 aa		4.58	□□□□□ -1.68
VPS71	YML041C	GAL80	P04387	435 aa		4.58	□□□□□ -1.68
VPS71	YML041C	CLB2	P24869	491 aa		4.58	□□□□□ -1.68
VPS71	YML041C	MDL1	P33310	695 aa		4.58	□□□□□ -1.68
VPS71	YML041C	SAS3	P34218	831 aa		4.58	□□□□□ -1.68
VPS71	YML041C	NUP133	P36161	1157 aa		4.58	□□□□□ -1.68
VPS71	YML041C	APE3	P37302	537 aa	Known RBP	4.58	□□□□□ -1.68
VPS71	YML041C	TSC10	P38342	320 aa		4.58	□□□□□ -1.68
VPS71	YML041C	VPS41	P38959	992 aa		4.58	□□□□□ -1.68
VPS71	YML041C	AFG3	P39925	761 aa		4.58	□□□□□ -1.68
VPS71	YML041C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
VPS71	YML041C	FAR3	P46671	204 aa		4.58	□□□□□ -1.68
VPS71	YML041C	PET130	P47065	347 aa		4.58	□□□□□ -1.68
VPS71	YML041C	ATP22	P50273	684 aa	Predicted RBP	4.58	□□□□□ -1.68
VPS71	YML041C	TWF1	P53250	332 aa		4.58	□□□□□ -1.68
VPS71	YML041C	ASI1	P54074	624 aa		4.58	□□□□□ -1.68
VPS71	YML041C	FIN1	Q03898	291 aa		4.58	□□□□□ -1.68
VPS71	YML041C	ARO10	Q06408	635 aa		4.58	□□□□□ -1.68
VPS71	YML041C	ATG29	Q12092	213 aa		4.58	□□□□□ -1.68
VPS71	YML041C	LEU9	Q12166	604 aa	Known RBP	4.58	□□□□□ -1.68
VPS71	YML041C	RLM1	Q12224	676 aa		4.58	□□□□□ -1.68
VPS71	YML041C	SEC39	Q12745	709 aa		4.58	□□□□□ -1.68
VPS71	YML041C	GPA1	P08539	472 aa		4.57	□□□□□ -1.68
VPS71	YML041C	TKL1	P23254	680 aa	Known RBP	4.57	□□□□□ -1.68
VPS71	YML041C	BUD14	P27637	709 aa		4.57	□□□□□ -1.68
VPS71	YML041C	PAP1	P29468	568 aa	Known RBP	4.57	□□□□□ -1.68
VPS71	YML041C	RPN2	P32565	945 aa	Known RBP	4.57	□□□□□ -1.68
VPS71	YML041C	OCT1	P35999	772 aa		4.57	□□□□□ -1.68
VPS71	YML041C	PXL1	P36166	706 aa		4.57	□□□□□ -1.68
VPS71	YML041C	RXT2	P38255	430 aa		4.57	□□□□□ -1.68
VPS71	YML041C	APD1	P38281	316 aa		4.57	□□□□□ -1.68
VPS71	YML041C	GDI1	P39958	451 aa	Known RBP	4.57	□□□□□ -1.68
VPS71	YML041C	VMA13	P41807	478 aa	Known RBP	4.57	□□□□□ -1.68
VPS71	YML041C	YJL055W	P47044	245 aa		4.57	□□□□□ -1.68
VPS71	YML041C	IMD4	P50094	524 aa	Known RBP	4.57	□□□□□ -1.68
VPS71	YML041C	ART5	P53244	586 aa	Known RBP	4.57	□□□□□ -1.68
VPS71	YML041C	BTN2	P53286	410 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 66.5 ms