RNA–Protein interactions for RNA: YLR408C

BLS1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeast

Gene BLS1, Length 369 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BLS1	YLR408C	YBR126W-A	Q8TGU7	68 aa		4.82	□□□□□ -1.64
BLS1	YLR408C	SPE2	P21182	396 aa		4.81	□□□□□ -1.64
BLS1	YLR408C	SAN1	P22470	610 aa		4.81	□□□□□ -1.64
BLS1	YLR408C	VMA16	P23968	213 aa		4.81	□□□□□ -1.64
BLS1	YLR408C	ATO2	P32907	282 aa		4.81	□□□□□ -1.64
BLS1	YLR408C	TSC10	P38342	320 aa		4.81	□□□□□ -1.64
BLS1	YLR408C	RFC1	P38630	861 aa	Known RBP	4.81	□□□□□ -1.64
BLS1	YLR408C	PHO90	P39535	881 aa		4.81	□□□□□ -1.64
BLS1	YLR408C	ELO1	P39540	310 aa		4.81	□□□□□ -1.64
BLS1	YLR408C	TMA108	P40462	946 aa		4.81	□□□□□ -1.64
BLS1	YLR408C	RPS7B	P48164	190 aa	Known RBP	4.81	□□□□□ -1.64
BLS1	YLR408C	DIA3	P52290	468 aa		4.81	□□□□□ -1.64
BLS1	YLR408C	IZH1	Q03419	316 aa		4.81	□□□□□ -1.64
BLS1	YLR408C	ADE13	Q05911	482 aa	Known RBP	4.81	□□□□□ -1.64
BLS1	YLR408C	ATG26	Q06321	1198 aa		4.81	□□□□□ -1.64
BLS1	YLR408C	IMH1	Q06704	911 aa	Known RBP	4.81	□□□□□ -1.64
BLS1	YLR408C	MLH2	Q07980	695 aa		4.81	□□□□□ -1.64
BLS1	YLR408C	ETT1	Q08421	412 aa	Known RBP	4.81	□□□□□ -1.64
BLS1	YLR408C	SRL1	Q08673	210 aa		4.81	□□□□□ -1.64
BLS1	YLR408C	NMD4	Q12129	218 aa		4.81	□□□□□ -1.64
BLS1	YLR408C	CBP1	P07252	654 aa		4.8	□□□□□ -1.64
BLS1	YLR408C	RPL42A	P0CX27	106 aa	Known RBP	4.8	□□□□□ -1.64
BLS1	YLR408C	RPL42B	P0CX28	106 aa	Known RBP	4.8	□□□□□ -1.64
BLS1	YLR408C	NOP4	P37838	685 aa	Known RBP	4.8	□□□□□ -1.64
BLS1	YLR408C	MNN2	P38069	597 aa		4.8	□□□□□ -1.64
BLS1	YLR408C	YBL029W	P38201	376 aa		4.8	□□□□□ -1.64
BLS1	YLR408C	FLC2	P39719	783 aa		4.8	□□□□□ -1.64
BLS1	YLR408C	SGF73	P53165	657 aa		4.8	□□□□□ -1.64
BLS1	YLR408C	EFM6	P53970	246 aa		4.8	□□□□□ -1.64
BLS1	YLR408C	CTL1	Q03220	320 aa	Known RBP	4.8	□□□□□ -1.64
BLS1	YLR408C	YAP7	Q08182	245 aa		4.8	□□□□□ -1.64
BLS1	YLR408C	LEU9	Q12166	604 aa	Known RBP	4.8	□□□□□ -1.64
BLS1	YLR408C	RRI2	Q12348	645 aa		4.8	□□□□□ -1.64
BLS1	YLR408C	SPE4	Q12455	300 aa		4.8	□□□□□ -1.64
BLS1	YLR408C	NOP58	Q12499	511 aa	Known RBP	4.8	□□□□□ -1.64
BLS1	YLR408C	AAC3	P18238	307 aa		4.79	□□□□□ -1.64
BLS1	YLR408C	YPK3	P38070	525 aa		4.79	□□□□□ -1.64
BLS1	YLR408C	UBA4	P38820	440 aa		4.79	□□□□□ -1.64
BLS1	YLR408C	YIL060W	P40519	144 aa		4.79	□□□□□ -1.64
BLS1	YLR408C	YNL181W	P53878	407 aa		4.79	□□□□□ -1.64
BLS1	YLR408C	ESBP6	P53918	673 aa		4.79	□□□□□ -1.64
BLS1	YLR408C	DSE3	Q08729	430 aa		4.79	□□□□□ -1.64
BLS1	YLR408C	ENT1	Q12518	454 aa		4.79	□□□□□ -1.64
BLS1	YLR408C	RPB8	P20436	146 aa		4.78	□□□□□ -1.64
BLS1	YLR408C	LCB1	P25045	558 aa	Known RBP	4.78	□□□□□ -1.64
BLS1	YLR408C	ERG26	P53199	349 aa	Known RBP	4.78	□□□□□ -1.64
BLS1	YLR408C	NGL3	Q03210	505 aa		4.78	□□□□□ -1.64
BLS1	YLR408C	HUA2	Q12134	243 aa		4.78	□□□□□ -1.64
BLS1	YLR408C	ARD1	P07347	238 aa	Predicted RBP	4.77	□□□□□ -1.65
BLS1	YLR408C	OLE1	P21147	510 aa	Known RBP	4.77	□□□□□ -1.65
BLS1	YLR408C	PUP3	P25451	205 aa	Known RBP	4.77	□□□□□ -1.65
BLS1	YLR408C	SYN8	P31377	255 aa		4.77	□□□□□ -1.65
BLS1	YLR408C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	not detected
BLS1	YLR408C	CCT6	P39079	546 aa		4.77	□□□□□ -1.65
BLS1	YLR408C	VRG4	P40107	337 aa		4.77	□□□□□ -1.65
BLS1	YLR408C	RPS10B	P46784	105 aa	Known RBP	4.77	□□□□□ -1.65
BLS1	YLR408C	APT1	P49435	187 aa	Known RBP	4.77	□□□□□ -1.65
BLS1	YLR408C	EMI2	Q04409	500 aa	Known RBP	4.77	□□□□□ -1.65
BLS1	YLR408C	TMA64	Q04600	565 aa	Known RBP	4.77	□□□□□ -1.65
BLS1	YLR408C	YMR254C	Q04838	102 aa		4.77	□□□□□ -1.65
BLS1	YLR408C	SNA4	Q07549	140 aa		4.77	□□□□□ -1.65
BLS1	YLR408C	RPS10A	Q08745	105 aa	Predicted RBP	4.77	□□□□□ -1.65
BLS1	YLR408C	EDE1	P34216	1381 aa		4.77	□□□□□ -1.65
BLS1	YLR408C	PUT2	P07275	575 aa		4.76	□□□□□ -1.65
BLS1	YLR408C	SEC53	P07283	254 aa	Known RBP	4.76	□□□□□ -1.65
BLS1	YLR408C	HSC82	P15108	705 aa	Known RBP	4.76	□□□□□ -1.65
BLS1	YLR408C	YCR043C	P25361	127 aa		4.76	□□□□□ -1.65
BLS1	YLR408C	YIH1	P25637	258 aa		4.76	□□□□□ -1.65
BLS1	YLR408C	ARC40	P38328	384 aa	Known RBP	4.76	□□□□□ -1.65
BLS1	YLR408C	ANS1	P38832	159 aa		4.76	□□□□□ -1.65
BLS1	YLR408C	RGI2	P40188	164 aa		4.76	□□□□□ -1.65
BLS1	YLR408C	IAH1	P41734	238 aa		4.76	□□□□□ -1.65
BLS1	YLR408C	TES1	P41903	349 aa	Known RBP	4.76	□□□□□ -1.65
BLS1	YLR408C	FAR3	P46671	204 aa		4.76	□□□□□ -1.65
BLS1	YLR408C	PYK2	P52489	506 aa	Known RBP	4.76	□□□□□ -1.65
BLS1	YLR408C	NUP100	Q02629	959 aa		4.76	□□□□□ -1.65
BLS1	YLR408C	YML037C	Q03703	340 aa		4.76	□□□□□ -1.65
BLS1	YLR408C	EKI1	Q03764	534 aa		4.76	□□□□□ -1.65
BLS1	YLR408C	YMR034C	Q05131	434 aa	Predicted RBP	4.76	□□□□□ -1.65
BLS1	YLR408C	LUC7	Q07508	261 aa	Predicted RBP	4.76	□□□□□ -1.65
BLS1	YLR408C	YDL218W	Q07629	317 aa		4.76	□□□□□ -1.65
BLS1	YLR408C	YEH1	Q07804	573 aa		4.76	□□□□□ -1.65
BLS1	YLR408C	GRC3	Q07845	632 aa		4.76	□□□□□ -1.65
BLS1	YLR408C	MF(ALPHA)1	P01149	165 aa		4.75	□□□□□ -1.65
BLS1	YLR408C	ARG81	P05085	880 aa		4.75	□□□□□ -1.65
BLS1	YLR408C	KGD1	P20967	1014 aa	Known RBP	4.75	□□□□□ -1.65
BLS1	YLR408C	BUD5	P25300	642 aa	Predicted RBP	4.75	□□□□□ -1.65
BLS1	YLR408C	GID7	P25569	745 aa		4.75	□□□□□ -1.65
BLS1	YLR408C	POL4	P25615	582 aa		4.75	□□□□□ -1.65
BLS1	YLR408C	SSE2	P32590	693 aa	Known RBP	4.75	□□□□□ -1.65
BLS1	YLR408C	MTR2	P34232	184 aa	Known RBP	4.75	□□□□□ -1.65
BLS1	YLR408C	STV1	P37296	890 aa		4.75	□□□□□ -1.65
BLS1	YLR408C	DBP8	P38719	431 aa		4.75	□□□□□ -1.65
BLS1	YLR408C	PKP2	P53170	491 aa		4.75	□□□□□ -1.65
BLS1	YLR408C	BET4	Q00618	327 aa		4.75	□□□□□ -1.65
BLS1	YLR408C	BUD22	Q04347	519 aa	Known RBP	4.75	□□□□□ -1.65
BLS1	YLR408C	YLR281C	Q05863	155 aa		4.75	□□□□□ -1.65
BLS1	YLR408C	APL5	Q08951	932 aa	Known RBP	4.75	□□□□□ -1.65
BLS1	YLR408C	MED1	Q12321	566 aa		4.75	□□□□□ -1.65
BLS1	YLR408C	SGF29	P25554	259 aa		4.74	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 79.1 ms