RNA–Protein interactions for RNA: YLR383W

SMC6, Transcript of Component of the SMC5-SMC6 complex, yeastyeast

Gene SMC6, Length 3,345 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC6YLR383W SGO1Q08490 590 aa2.42□□□□□ -2.02
SMC6YLR383W RUD3Q12234 484 aaKnown RBP2.42□□□□□ -2.02
SMC6YLR383W Q0142Q9ZZW4 58 aa2.42□□□□□ -2.02
SMC6YLR383W IME1P21190 360 aa2.41□□□□□ -2.02
SMC6YLR383W SNT1P25357 1226 aa2.41□□□□□ -2.02
SMC6YLR383W RRT12P25381 491 aa2.41□□□□□ -2.02
SMC6YLR383W SEC1P30619 724 aaKnown RBP2.41□□□□□ -2.02
SMC6YLR383W PRP19P32523 503 aaKnown RBP2.41□□□□□ -2.02
SMC6YLR383W STO1P34160 861 aaKnown RBP2.41□□□□□ -2.02
SMC6YLR383W NNK1P36003 928 aa2.41□□□□□ -2.02
SMC6YLR383W MIC60P36112 540 aa2.41□□□□□ -2.02
SMC6YLR383W CTP1P38152 299 aa2.41□□□□□ -2.02
SMC6YLR383W YBR062CP38239 180 aa2.41□□□□□ -2.02
SMC6YLR383W BIT2P38346 545 aa2.41□□□□□ -2.02
SMC6YLR383W SSZ1P38788 538 aaKnown RBP2.41□□□□□ -2.02
SMC6YLR383W PEX7P39108 375 aa2.41□□□□□ -2.02
SMC6YLR383W YAT2P40017 923 aa2.41□□□□□ -2.02
SMC6YLR383W QRI7P43122 407 aa2.41□□□□□ -2.02
SMC6YLR383W ARC1P46672 376 aaKnown RBP2.41□□□□□ -2.02
SMC6YLR383W GUF1P46943 645 aa2.41□□□□□ -2.02
SMC6YLR383W YDR444WQ04093 687 aa2.41□□□□□ -2.02
SMC6YLR383W YDR109CQ04585 715 aa2.41□□□□□ -2.02
SMC6YLR383W YLR287CQ05881 355 aa2.41□□□□□ -2.02
SMC6YLR383W CDD1Q06549 142 aa2.41□□□□□ -2.02
SMC6YLR383W SLD7Q08457 257 aa2.41□□□□□ -2.02
SMC6YLR383W YPQ1Q12010 308 aa2.41□□□□□ -2.02
SMC6YLR383W NDJ1Q12366 352 aa2.41□□□□□ -2.02
SMC6YLR383W AI5_ALPHAQ9ZZX1 630 aa2.41□□□□□ -2.02
SMC6YLR383W JIP3O13555 125 aa2.41□□□□□ -2.02
SMC6YLR383W DAL2P25335 343 aa2.41□□□□□ -2.02
SMC6YLR383W PRR1P28708 518 aa2.41□□□□□ -2.02
SMC6YLR383W TPS2P31688 896 aaKnown RBP2.41□□□□□ -2.02
SMC6YLR383W DBF4P32325 704 aa2.41□□□□□ -2.02
SMC6YLR383W PEX5P35056 612 aa2.41□□□□□ -2.02
SMC6YLR383W HEL1P36113 551 aa2.41□□□□□ -2.02
SMC6YLR383W YBR032WP38223 100 aa2.41□□□□□ -2.02
SMC6YLR383W IML3P38265 245 aa2.41□□□□□ -2.02
SMC6YLR383W OSW5P40219 148 aa2.41□□□□□ -2.02
SMC6YLR383W YJR061WP40355 935 aa2.41□□□□□ -2.02
SMC6YLR383W FAF1P40546 346 aaPredicted RBP2.41□□□□□ -2.02
SMC6YLR383W ERR3P42222 437 aa2.41□□□□□ -2.02
SMC6YLR383W RET2P43621 546 aa2.41□□□□□ -2.02
SMC6YLR383W AIM23P47015 356 aa2.41□□□□□ -2.02
SMC6YLR383W UBC9P50623 157 aaPredicted RBP2.41□□□□□ -2.02
SMC6YLR383W BUD9P53226 547 aa2.41□□□□□ -2.02
SMC6YLR383W MAP1Q01662 387 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
SMC6YLR383W SLU7Q02775 382 aaKnown RBP2.41□□□□□ -2.02
SMC6YLR383W FMN1Q03778 218 aa2.41□□□□□ -2.02
SMC6YLR383W GYL1Q04322 720 aa2.41□□□□□ -2.02
SMC6YLR383W TMN2Q04562 672 aa2.41□□□□□ -2.02
SMC6YLR383W ESC8Q08119 714 aa2.41□□□□□ -2.02
SMC6YLR383W MCH5Q08777 521 aa2.41□□□□□ -2.02
SMC6YLR383W HAL9Q12180 1030 aa2.41□□□□□ -2.02
SMC6YLR383W YVC1Q12324 675 aa2.41□□□□□ -2.02
SMC6YLR383W CET1O13297 549 aaPredicted RBP2.4□□□□□ -2.02
SMC6YLR383W ADE8P04161 214 aa2.4□□□□□ -2.02
SMC6YLR383W HOP1P20050 605 aa2.4□□□□□ -2.02
SMC6YLR383W MNE1P24720 663 aa2.4□□□□□ -2.02
SMC6YLR383W DBF20P32328 564 aa2.4□□□□□ -2.02
SMC6YLR383W SWH1P35845 1188 aa2.4□□□□□ -2.02
SMC6YLR383W MAE1P36013 669 aaKnown RBP2.4□□□□□ -2.02
SMC6YLR383W SIF2P38262 535 aa2.4□□□□□ -2.02
SMC6YLR383W PPE1P38796 400 aa2.4□□□□□ -2.02
SMC6YLR383W CIN4P39110 191 aa2.4□□□□□ -2.02
SMC6YLR383W FMP10P40098 244 aa2.4□□□□□ -2.02
SMC6YLR383W GID8P40208 455 aa2.4□□□□□ -2.02
SMC6YLR383W IRC5P43610 853 aa2.4□□□□□ -2.02
SMC6YLR383W COG1P53079 417 aa2.4□□□□□ -2.02
SMC6YLR383W DRN1P53255 507 aaKnown RBP2.4□□□□□ -2.02
SMC6YLR383W BUD32P53323 261 aa2.4□□□□□ -2.02
SMC6YLR383W COP1P53622 1201 aaKnown RBP2.4□□□□□ -2.02
SMC6YLR383W RHO3Q00245 231 aaKnown RBP2.4□□□□□ -2.02
SMC6YLR383W YDR132CQ03900 495 aa2.4□□□□□ -2.02
SMC6YLR383W NHX1Q04121 633 aa2.4□□□□□ -2.02
SMC6YLR383W TPO1Q07824 586 aa2.4□□□□□ -2.02
SMC6YLR383W NOP56Q12460 504 aaKnown RBP RIP-Chip data2.4□□□□□ -2.02not detected
SMC6YLR383W SPT3P06844 337 aa2.4□□□□□ -2.03
SMC6YLR383W MRPL8P22353 238 aa2.4□□□□□ -2.03
SMC6YLR383W GPI10P30777 616 aa2.4□□□□□ -2.03
SMC6YLR383W FUN30P31380 1131 aa2.4□□□□□ -2.03
SMC6YLR383W MF(ALPHA)2P32435 120 aa2.4□□□□□ -2.03
SMC6YLR383W THI80P35202 319 aa2.4□□□□□ -2.03
SMC6YLR383W ATG14P38270 344 aa2.4□□□□□ -2.03
SMC6YLR383W BEM4P39011 633 aa2.4□□□□□ -2.03
SMC6YLR383W YIL161WP40449 235 aaKnown RBP2.4□□□□□ -2.03
SMC6YLR383W RRT5P43607 289 aa2.4□□□□□ -2.03
SMC6YLR383W DAM1P53267 343 aa2.4□□□□□ -2.03
SMC6YLR383W HER2Q03557 464 aa2.4□□□□□ -2.03
SMC6YLR383W NDD1Q08887 554 aa2.4□□□□□ -2.03
SMC6YLR383W AHC1Q12433 566 aa2.4□□□□□ -2.03
SMC6YLR383W NSI1Q12457 570 aa2.4□□□□□ -2.03
SMC6YLR383W ZPS1Q12512 249 aa2.4□□□□□ -2.03
SMC6YLR383W YOL087CQ99247 1116 aa2.4□□□□□ -2.03
SMC6YLR383W YPR096CO13587 100 aa2.4□□□□□ -2.03
SMC6YLR383W SAC7P17121 654 aa2.4□□□□□ -2.03
SMC6YLR383W TRX1P22217 103 aaKnown RBP2.4□□□□□ -2.03
SMC6YLR383W NFS1P25374 497 aa2.4□□□□□ -2.03
SMC6YLR383W SGE1P33335 543 aa2.4□□□□□ -2.03
SMC6YLR383W NIC96P34077 839 aa2.4□□□□□ -2.03
SMC6YLR383W AGP2P38090 596 aa2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms