RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W SHE10P53075 577 aa2.05□□□□□ -2.08
CFT2YLR115W JJJ1P53863 590 aa2.05□□□□□ -2.08
CFT2YLR115W ZDS2P54786 942 aa2.05□□□□□ -2.08
CFT2YLR115W VPS9P54787 451 aa2.05□□□□□ -2.08
CFT2YLR115W YAT1P80235 687 aa2.05□□□□□ -2.08
CFT2YLR115W TRS130Q03660 1102 aa2.05□□□□□ -2.08
CFT2YLR115W CRF1Q04930 467 aa2.05□□□□□ -2.08
CFT2YLR115W AIM6Q07716 390 aa2.05□□□□□ -2.08
CFT2YLR115W YER175W-AQ8TGU4 54 aa2.05□□□□□ -2.08
CFT2YLR115W NUC1P08466 329 aa2.04□□□□□ -2.08
CFT2YLR115W RAD51P25454 400 aa2.04□□□□□ -2.08
CFT2YLR115W APE3P37302 537 aaKnown RBP2.04□□□□□ -2.08
CFT2YLR115W LRP1P38801 184 aaKnown RBP2.04□□□□□ -2.08
CFT2YLR115W FLO5P38894 1075 aa2.04□□□□□ -2.08
CFT2YLR115W YMR124WP39523 943 aaKnown RBP2.04□□□□□ -2.08
CFT2YLR115W SWD1P39706 426 aa2.04□□□□□ -2.08
CFT2YLR115W NOP16P40007 231 aaKnown RBP2.04□□□□□ -2.08
CFT2YLR115W AXL1P40851 1208 aa2.04□□□□□ -2.08
CFT2YLR115W QRI7P43122 407 aa2.04□□□□□ -2.08
CFT2YLR115W CEG1Q01159 459 aaPredicted RBP2.04□□□□□ -2.08
CFT2YLR115W RMT2Q03305 412 aa2.04□□□□□ -2.08
CFT2YLR115W PFA4Q12006 378 aa2.04□□□□□ -2.08
CFT2YLR115W NUR1Q12066 484 aa2.04□□□□□ -2.08
CFT2YLR115W YOL114CQ12322 202 aa2.04□□□□□ -2.08
CFT2YLR115W QCR6P00127 147 aa2.04□□□□□ -2.08
CFT2YLR115W POL3P15436 1097 aa2.04□□□□□ -2.08
CFT2YLR115W XRS2P33301 854 aa2.04□□□□□ -2.08
CFT2YLR115W CNS1P33313 385 aa2.04□□□□□ -2.08
CFT2YLR115W SDS22P36047 338 aa2.04□□□□□ -2.08
CFT2YLR115W MUD2P36084 527 aaKnown RBP2.04□□□□□ -2.08
CFT2YLR115W GND1P38720 489 aaKnown RBP2.04□□□□□ -2.08
CFT2YLR115W YLF2P38746 405 aa2.04□□□□□ -2.08
CFT2YLR115W OTU2P38747 307 aaKnown RBP2.04□□□□□ -2.08
CFT2YLR115W BFR1P38934 470 aaKnown RBP RIP-Chip data2.04□□□□□ -2.08not detected
CFT2YLR115W YJL068CP40363 299 aa2.04□□□□□ -2.08
CFT2YLR115W MNP1P53163 194 aaPredicted RBP2.04□□□□□ -2.08
CFT2YLR115W CBK1P53894 756 aa2.04□□□□□ -2.08
CFT2YLR115W TEP1P53916 434 aa2.04□□□□□ -2.08
CFT2YLR115W PEX25Q02969 394 aa2.04□□□□□ -2.08
CFT2YLR115W GYL1Q04322 720 aa2.04□□□□□ -2.08
CFT2YLR115W MRPL1Q04599 285 aa2.04□□□□□ -2.08
CFT2YLR115W EIS1Q05050 843 aaKnown RBP2.04□□□□□ -2.08
CFT2YLR115W SEC39Q12745 709 aa2.04□□□□□ -2.08
CFT2YLR115W NUP157P40064 1391 aaKnown RBP2.04□□□□□ -2.08
CFT2YLR115W PDX1P16451 410 aa2.04□□□□□ -2.08
CFT2YLR115W RPB4P20433 221 aaPredicted RBP2.04□□□□□ -2.08
CFT2YLR115W RPS7AP26786 190 aaKnown RBP2.04□□□□□ -2.08
CFT2YLR115W NTG1P31378 399 aa2.04□□□□□ -2.08
CFT2YLR115W FRD1P32614 470 aaKnown RBP2.04□□□□□ -2.08
CFT2YLR115W RIB7P33312 244 aa2.04□□□□□ -2.08
CFT2YLR115W NIP100P33420 868 aa2.04□□□□□ -2.08
CFT2YLR115W VBA2P38358 474 aaKnown RBP2.04□□□□□ -2.08
CFT2YLR115W ERC1P38767 581 aa2.04□□□□□ -2.08
CFT2YLR115W VPS45P38932 577 aa2.04□□□□□ -2.08
CFT2YLR115W SEC28P40509 296 aaKnown RBP2.04□□□□□ -2.08
CFT2YLR115W CDC1P40986 491 aa2.04□□□□□ -2.08
CFT2YLR115W ZIM17P42844 174 aa2.04□□□□□ -2.08
CFT2YLR115W YJL107CP42947 387 aa2.04□□□□□ -2.08
CFT2YLR115W ASK10P48361 1146 aa2.04□□□□□ -2.08
CFT2YLR115W ART5P53244 586 aaKnown RBP2.04□□□□□ -2.08
CFT2YLR115W EOS1P53938 366 aa2.04□□□□□ -2.08
CFT2YLR115W TIM11P81449 96 aaPredicted RBP2.04□□□□□ -2.08
CFT2YLR115W MRPL13Q02204 264 aa2.04□□□□□ -2.08
CFT2YLR115W CRD1Q07560 283 aa2.04□□□□□ -2.08
CFT2YLR115W SRL1Q08673 210 aa2.04□□□□□ -2.08
CFT2YLR115W HUA2Q12134 243 aa2.04□□□□□ -2.08
CFT2YLR115W YSP2Q06681 1438 aa2.03□□□□□ -2.08
CFT2YLR115W HNM1P19807 563 aa2.03□□□□□ -2.08
CFT2YLR115W RPC53P25441 422 aa2.03□□□□□ -2.08
CFT2YLR115W PSF2P40359 213 aa2.03□□□□□ -2.08
CFT2YLR115W YIL152WP40455 235 aa2.03□□□□□ -2.08
CFT2YLR115W NPA3P47122 385 aa2.03□□□□□ -2.08
CFT2YLR115W YMR155WQ03795 547 aa2.03□□□□□ -2.08
CFT2YLR115W RNH1Q04740 348 aa2.03□□□□□ -2.08
CFT2YLR115W MCP2Q06567 569 aa2.03□□□□□ -2.08
CFT2YLR115W AAD4Q07747 329 aa2.03□□□□□ -2.08
CFT2YLR115W MLH2Q07980 695 aa2.03□□□□□ -2.08
CFT2YLR115W CLP1Q08685 445 aaPredicted RBP2.03□□□□□ -2.08
CFT2YLR115W ATX2Q12067 313 aa2.03□□□□□ -2.08
CFT2YLR115W PAR32Q12515 295 aaKnown RBP2.03□□□□□ -2.08
CFT2YLR115W PDR11P40550 1411 aa2.03□□□□□ -2.08
CFT2YLR115W MSS18P08593 268 aa2.03□□□□□ -2.09
CFT2YLR115W ILS1P09436 1072 aaKnown RBP2.03□□□□□ -2.09
CFT2YLR115W REC107P21651 314 aa2.03□□□□□ -2.09
CFT2YLR115W CNA1P23287 553 aa2.03□□□□□ -2.09
CFT2YLR115W DAL80P26343 269 aa2.03□□□□□ -2.09
CFT2YLR115W TEF4P36008 412 aaKnown RBP2.03□□□□□ -2.09
CFT2YLR115W RPC37P36121 282 aa2.03□□□□□ -2.09
CFT2YLR115W UTP9P38882 575 aaKnown RBP2.03□□□□□ -2.09
CFT2YLR115W RMD8P43620 662 aa2.03□□□□□ -2.09
CFT2YLR115W TIM10P87108 93 aa2.03□□□□□ -2.09
CFT2YLR115W TAF11Q04226 346 aa2.03□□□□□ -2.09
CFT2YLR115W MFB1Q04922 465 aa2.03□□□□□ -2.09
CFT2YLR115W YLH47Q06493 454 aa2.03□□□□□ -2.09
CFT2YLR115W ICL2Q12031 575 aa2.03□□□□□ -2.09
CFT2YLR115W REX3Q12090 404 aa2.03□□□□□ -2.09
CFT2YLR115W RUD3Q12234 484 aaKnown RBP2.03□□□□□ -2.09
CFT2YLR115W SKM1Q12469 655 aa2.03□□□□□ -2.09
CFT2YLR115W GCN4P03069 281 aa2.02□□□□□ -2.09
CFT2YLR115W PTC6P25646 442 aa2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 48.4 ms