RNA–Protein interactions for RNA: YLR097C

HRT3, Transcript of Putative SCF-ubiquitin ligase F-box protein, yeast

Gene HRT3, Length 1,035 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HRT3	YLR097C	SPE4	Q12455	300 aa		4.65	□□□□□ -1.67
HRT3	YLR097C	RTP1	Q12751	981 aa		4.65	□□□□□ -1.67
HRT3	YLR097C	MF(ALPHA)1	P01149	165 aa		4.64	□□□□□ -1.67
HRT3	YLR097C	GCN4	P03069	281 aa		4.64	□□□□□ -1.67
HRT3	YLR097C	MRP7	P12687	371 aa		4.64	□□□□□ -1.67
HRT3	YLR097C	MET8	P15807	274 aa		4.64	□□□□□ -1.67
HRT3	YLR097C	AIM17	P23180	465 aa	Known RBP	4.64	□□□□□ -1.67
HRT3	YLR097C	PEP3	P27801	918 aa		4.64	□□□□□ -1.67
HRT3	YLR097C	MIA40	P36046	403 aa		4.64	□□□□□ -1.67
HRT3	YLR097C	STV1	P37296	890 aa		4.64	□□□□□ -1.67
HRT3	YLR097C	YBR225W	P38321	900 aa		4.64	□□□□□ -1.67
HRT3	YLR097C	VRG4	P40107	337 aa		4.64	□□□□□ -1.67
HRT3	YLR097C	PCI8	P40512	444 aa		4.64	□□□□□ -1.67
HRT3	YLR097C	FAR3	P46671	204 aa		4.64	□□□□□ -1.67
HRT3	YLR097C	IRC8	P47046	822 aa		4.64	□□□□□ -1.67
HRT3	YLR097C	YGR127W	P53275	312 aa		4.64	□□□□□ -1.67
HRT3	YLR097C	RPL15B	P54780	204 aa	Predicted RBP	4.64	□□□□□ -1.67
HRT3	YLR097C	EMI2	Q04409	500 aa	Known RBP	4.64	□□□□□ -1.67
HRT3	YLR097C	UTP21	Q06078	939 aa	Predicted RBP	4.64	□□□□□ -1.67
HRT3	YLR097C	GSH2	Q08220	491 aa		4.64	□□□□□ -1.67
HRT3	YLR097C	SDH5	Q08230	162 aa		4.64	□□□□□ -1.67
HRT3	YLR097C	YPL272C	Q08984	517 aa		4.64	□□□□□ -1.67
HRT3	YLR097C	YLR112W	Q12130	139 aa		4.64	□□□□□ -1.67
HRT3	YLR097C	HER1	Q12276	1246 aa		4.64	□□□□□ -1.67
HRT3	YLR097C	RPB8	P20436	146 aa		4.63	□□□□□ -1.67
HRT3	YLR097C	GAC1	P28006	793 aa		4.63	□□□□□ -1.67
HRT3	YLR097C	MGM1	P32266	881 aa		4.63	□□□□□ -1.67
HRT3	YLR097C	TSC10	P38342	320 aa		4.63	□□□□□ -1.67
HRT3	YLR097C	DBP8	P38719	431 aa		4.63	□□□□□ -1.67
HRT3	YLR097C	NDE1	P40215	560 aa		4.63	□□□□□ -1.67
HRT3	YLR097C	PTR3	P43606	678 aa		4.63	□□□□□ -1.67
HRT3	YLR097C	MRX6	P48564	524 aa		4.63	□□□□□ -1.67
HRT3	YLR097C	LYS20	P48570	428 aa	Known RBP	4.63	□□□□□ -1.67
HRT3	YLR097C	LCL3	P53153	274 aa		4.63	□□□□□ -1.67
HRT3	YLR097C	RBG2	P53295	368 aa	Known RBP	4.63	□□□□□ -1.67
HRT3	YLR097C	EFM6	P53970	246 aa		4.63	□□□□□ -1.67
HRT3	YLR097C	DPB4	Q04603	196 aa	Known RBP	4.63	□□□□□ -1.67
HRT3	YLR097C	ECI1	Q05871	280 aa		4.63	□□□□□ -1.67
HRT3	YLR097C	LUC7	Q07508	261 aa	Predicted RBP	4.63	□□□□□ -1.67
HRT3	YLR097C	YEH1	Q07804	573 aa		4.63	□□□□□ -1.67
HRT3	YLR097C	ETT1	Q08421	412 aa	Known RBP	4.63	□□□□□ -1.67
HRT3	YLR097C	CIR2	Q08822	631 aa		4.63	□□□□□ -1.67
HRT3	YLR097C	FMP40	Q08968	688 aa	Predicted RBP	4.63	□□□□□ -1.67
HRT3	YLR097C	INH1	P01097	85 aa		4.62	□□□□□ -1.67
HRT3	YLR097C	PGS1	P25578	521 aa		4.62	□□□□□ -1.67
HRT3	YLR097C	RGI2	P40188	164 aa		4.62	□□□□□ -1.67
HRT3	YLR097C	ESL1	P40456	1118 aa		4.62	□□□□□ -1.67
HRT3	YLR097C	YIR016W	P40572	265 aa		4.62	□□□□□ -1.67
HRT3	YLR097C	MDV1	P47025	714 aa		4.62	□□□□□ -1.67
HRT3	YLR097C	SGF73	P53165	657 aa		4.62	□□□□□ -1.67
HRT3	YLR097C	ERG26	P53199	349 aa	Known RBP	4.62	□□□□□ -1.67
HRT3	YLR097C	VPS75	P53853	264 aa		4.62	□□□□□ -1.67
HRT3	YLR097C	MDM1	Q01846	1127 aa		4.62	□□□□□ -1.67
HRT3	YLR097C	ATG26	Q06321	1198 aa		4.62	□□□□□ -1.67
HRT3	YLR097C	YJR112W-A	Q3E743	109 aa		4.62	□□□□□ -1.67
HRT3	YLR097C	ARG81	P05085	880 aa		4.61	□□□□□ -1.67
HRT3	YLR097C	CBS1	P14066	229 aa		4.61	□□□□□ -1.67
HRT3	YLR097C	PUP3	P25451	205 aa	Known RBP	4.61	□□□□□ -1.67
HRT3	YLR097C	SSE2	P32590	693 aa	Known RBP	4.61	□□□□□ -1.67
HRT3	YLR097C	YBR144C	P34215	104 aa		4.61	□□□□□ -1.67
HRT3	YLR097C	REG2	P38232	338 aa		4.61	□□□□□ -1.67
HRT3	YLR097C	ICS2	P38284	255 aa		4.61	□□□□□ -1.67
HRT3	YLR097C	ANS1	P38832	159 aa		4.61	□□□□□ -1.67
HRT3	YLR097C	VID30	P53076	958 aa		4.61	□□□□□ -1.67
HRT3	YLR097C	ARE2	P53629	642 aa	Known RBP	4.61	□□□□□ -1.67
HRT3	YLR097C	RPT6	Q01939	405 aa	Known RBP	4.61	□□□□□ -1.67
HRT3	YLR097C	CTL1	Q03220	320 aa	Known RBP	4.61	□□□□□ -1.67
HRT3	YLR097C	MFB1	Q04922	465 aa		4.61	□□□□□ -1.67
HRT3	YLR097C	GRC3	Q07845	632 aa		4.61	□□□□□ -1.67
HRT3	YLR097C	TEN1	Q07921	160 aa		4.61	□□□□□ -1.67
HRT3	YLR097C	AFT2	Q08957	416 aa		4.61	□□□□□ -1.67
HRT3	YLR097C	YPT6	Q99260	215 aa		4.61	□□□□□ -1.67
HRT3	YLR097C	CBP1	P07252	654 aa		4.6	□□□□□ -1.67
HRT3	YLR097C	YCP4	P25349	247 aa	Known RBP	4.6	□□□□□ -1.67
HRT3	YLR097C	IMG1	P25626	169 aa		4.6	□□□□□ -1.67
HRT3	YLR097C	ASK1	P35734	292 aa		4.6	□□□□□ -1.67
HRT3	YLR097C	CCT6	P39079	546 aa		4.6	□□□□□ -1.67
HRT3	YLR097C	NPR2	P39923	615 aa		4.6	□□□□□ -1.67
HRT3	YLR097C	HXT9	P40885	567 aa		4.6	□□□□□ -1.67
HRT3	YLR097C	RMD8	P43620	662 aa		4.6	□□□□□ -1.67
HRT3	YLR097C	YGR066C	P53242	292 aa		4.6	□□□□□ -1.67
HRT3	YLR097C	YNL234W	P53857	426 aa		4.6	□□□□□ -1.67
HRT3	YLR097C	IZH1	Q03419	316 aa		4.6	□□□□□ -1.67
HRT3	YLR097C	ECM30	Q06673	1274 aa		4.6	□□□□□ -1.67
HRT3	YLR097C	TAH18	Q12181	623 aa		4.6	□□□□□ -1.67
HRT3	YLR097C	UBX3	Q12229	455 aa		4.6	□□□□□ -1.67
HRT3	YLR097C	KGD1	P20967	1014 aa	Known RBP	4.59	□□□□□ -1.67
HRT3	YLR097C	OCA4	P25366	362 aa		4.59	□□□□□ -1.67
HRT3	YLR097C	BOS1	P25385	244 aa		4.59	□□□□□ -1.67
HRT3	YLR097C	EDE1	P34216	1381 aa		4.59	□□□□□ -1.67
HRT3	YLR097C	YBL055C	P34220	418 aa	Predicted RBP	4.59	□□□□□ -1.67
HRT3	YLR097C	JNM1	P36224	373 aa		4.59	□□□□□ -1.67
HRT3	YLR097C	ARP1	P38696	384 aa		4.59	□□□□□ -1.67
HRT3	YLR097C	LEU5	P38702	357 aa		4.59	□□□□□ -1.67
HRT3	YLR097C	YIL060W	P40519	144 aa		4.59	□□□□□ -1.67
HRT3	YLR097C	ARF3	P40994	183 aa	RIP-Chip data	4.59	□□□□□ -1.67	not detected
HRT3	YLR097C	SCW4	P53334	386 aa	Known RBP	4.59	□□□□□ -1.67
HRT3	YLR097C	TIM10	P87108	93 aa		4.59	□□□□□ -1.67
HRT3	YLR097C	RSM23	Q01163	450 aa		4.59	□□□□□ -1.67
HRT3	YLR097C	TDA9	Q04545	1251 aa		4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 47 ms