RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C ASH1P34233 588 aa2.32□□□□□ -2.04
CSF1YLR087C UBP13P38187 747 aa2.32□□□□□ -2.04
CSF1YLR087C SEC72P39742 193 aaKnown RBP2.32□□□□□ -2.04
CSF1YLR087C ALG2P43636 503 aa2.32□□□□□ -2.04
CSF1YLR087C TRS85P46944 698 aa2.32□□□□□ -2.04
CSF1YLR087C YGL108CP53139 140 aa2.32□□□□□ -2.04
CSF1YLR087C YGR017WP53210 297 aa2.32□□□□□ -2.04
CSF1YLR087C YDR338CQ05497 695 aa2.32□□□□□ -2.04
CSF1YLR087C BOP2Q06150 570 aa2.32□□□□□ -2.04
CSF1YLR087C CWC2Q12046 339 aaPredicted RBP2.32□□□□□ -2.04
CSF1YLR087C PUS9Q12069 462 aa2.32□□□□□ -2.04
CSF1YLR087C YOR019WQ99248 730 aa2.32□□□□□ -2.04
CSF1YLR087C RAD61Q99359 647 aa2.32□□□□□ -2.04
CSF1YLR087C RIF1P29539 1916 aa2.32□□□□□ -2.04
CSF1YLR087C GAL7P08431 366 aa2.32□□□□□ -2.04
CSF1YLR087C RNR2P09938 399 aaKnown RBP2.32□□□□□ -2.04
CSF1YLR087C RPC31P17890 251 aa2.32□□□□□ -2.04
CSF1YLR087C ADK2P26364 225 aa2.32□□□□□ -2.04
CSF1YLR087C GDH2P33327 1092 aaKnown RBP2.32□□□□□ -2.04
CSF1YLR087C YBL029WP38201 376 aa2.32□□□□□ -2.04
CSF1YLR087C MSS4P38994 779 aa2.32□□□□□ -2.04
CSF1YLR087C PHM8P40025 321 aa2.32□□□□□ -2.04
CSF1YLR087C TOK1P40310 691 aa2.32□□□□□ -2.04
CSF1YLR087C YGL117WP53133 265 aa2.32□□□□□ -2.04
CSF1YLR087C LCL3P53153 274 aa2.32□□□□□ -2.04
CSF1YLR087C RRP40Q08285 240 aaKnown RBP2.32□□□□□ -2.04
CSF1YLR087C AEP3Q12089 606 aa2.32□□□□□ -2.04
CSF1YLR087C SFG1Q12507 346 aa2.32□□□□□ -2.04
CSF1YLR087C MET17P06106 444 aa2.31□□□□□ -2.04
CSF1YLR087C AMD1P15274 810 aaKnown RBP2.31□□□□□ -2.04
CSF1YLR087C RPS1BP23248 255 aaKnown RBP2.31□□□□□ -2.04
CSF1YLR087C TFC1P32367 649 aa2.31□□□□□ -2.04
CSF1YLR087C MRP49P32388 137 aa2.31□□□□□ -2.04
CSF1YLR087C NUP2P32499 720 aa2.31□□□□□ -2.04
CSF1YLR087C YBL010CP32788 280 aa2.31□□□□□ -2.04
CSF1YLR087C MOT2P34909 587 aaKnown RBP2.31□□□□□ -2.04
CSF1YLR087C YBR259WP38338 688 aa2.31□□□□□ -2.04
CSF1YLR087C PAC2P39937 518 aa2.31□□□□□ -2.04
CSF1YLR087C RPN3P40016 523 aaKnown RBP2.31□□□□□ -2.04
CSF1YLR087C CAF120P53836 1060 aa2.31□□□□□ -2.04
CSF1YLR087C UFO1Q04511 668 aa2.31□□□□□ -2.04
CSF1YLR087C RRP45Q05636 305 aaKnown RBP2.31□□□□□ -2.04
CSF1YLR087C HKR1P41809 1802 aa2.31□□□□□ -2.04
CSF1YLR087C EST1P17214 699 aaPredicted RBP2.31□□□□□ -2.04
CSF1YLR087C CKI1P20485 582 aa2.31□□□□□ -2.04
CSF1YLR087C SCL1P21243 252 aaKnown RBP2.31□□□□□ -2.04
CSF1YLR087C YCR007CP25354 239 aa2.31□□□□□ -2.04
CSF1YLR087C CCR4P31384 837 aaKnown RBP2.31□□□□□ -2.04
CSF1YLR087C APE2P32454 952 aaKnown RBP2.31□□□□□ -2.04
CSF1YLR087C ORC6P38826 435 aa2.31□□□□□ -2.04
CSF1YLR087C MLH1P38920 769 aa2.31□□□□□ -2.04
CSF1YLR087C FMP10P40098 244 aa2.31□□□□□ -2.04
CSF1YLR087C ELP2P42935 788 aa2.31□□□□□ -2.04
CSF1YLR087C DAN4P47179 1161 aa2.31□□□□□ -2.04
CSF1YLR087C PYK2P52489 506 aaKnown RBP2.31□□□□□ -2.04
CSF1YLR087C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04 RIP-Chip
CSF1YLR087C YML037CQ03703 340 aa2.31□□□□□ -2.04
CSF1YLR087C SDH7Q04401 133 aa2.31□□□□□ -2.04
CSF1YLR087C ARP9Q05123 467 aa2.31□□□□□ -2.04
CSF1YLR087C RAD34Q06665 692 aa2.31□□□□□ -2.04
CSF1YLR087C HBT1Q07653 1046 aaKnown RBP2.31□□□□□ -2.04
CSF1YLR087C ZEO1Q08245 113 aa2.31□□□□□ -2.04
CSF1YLR087C YDL176WQ12027 708 aa2.31□□□□□ -2.04
CSF1YLR087C SRO7Q12038 1033 aa2.31□□□□□ -2.04
CSF1YLR087C HUA2Q12134 243 aa2.31□□□□□ -2.04
CSF1YLR087C CCP1P00431 361 aa2.31□□□□□ -2.04
CSF1YLR087C SNF1P06782 633 aaKnown RBP2.31□□□□□ -2.04
CSF1YLR087C YFL068WP0CX99 160 aa2.31□□□□□ -2.04
CSF1YLR087C YLL066W-AP0CY00 160 aa2.31□□□□□ -2.04
CSF1YLR087C YLL067W-AP0CY01 160 aa2.31□□□□□ -2.04
CSF1YLR087C FUS3P16892 353 aaKnown RBP2.31□□□□□ -2.04
CSF1YLR087C CMK1P27466 446 aaKnown RBP2.31□□□□□ -2.04
CSF1YLR087C NAM9P27929 486 aa2.31□□□□□ -2.04
CSF1YLR087C PMU1P36069 295 aa2.31□□□□□ -2.04
CSF1YLR087C YKR041WP36134 250 aa2.31□□□□□ -2.04
CSF1YLR087C YBL086CP38177 466 aa2.31□□□□□ -2.04
CSF1YLR087C DBP8P38719 431 aa2.31□□□□□ -2.04
CSF1YLR087C DHH1P39517 506 aaKnown RBP2.31□□□□□ -2.04
CSF1YLR087C PAC11P40960 533 aa2.31□□□□□ -2.04
CSF1YLR087C RPE1P46969 238 aa2.31□□□□□ -2.04
CSF1YLR087C SWC4P53201 476 aa2.31□□□□□ -2.04
CSF1YLR087C PRM1P53835 661 aa2.31□□□□□ -2.04
CSF1YLR087C HFD1Q04458 532 aa2.31□□□□□ -2.04
CSF1YLR087C RTT109Q07794 436 aa2.31□□□□□ -2.04
CSF1YLR087C TGS1Q12052 315 aa2.31□□□□□ -2.04
CSF1YLR087C URA2P07259 2214 aaKnown RBP2.31□□□□□ -2.04
CSF1YLR087C PHO5P00635 467 aa2.31□□□□□ -2.04
CSF1YLR087C RPL19AP0CX82 189 aaKnown RBP2.31□□□□□ -2.04
CSF1YLR087C RPL19BP0CX83 189 aaPredicted RBP2.31□□□□□ -2.04
CSF1YLR087C SNA3P14359 133 aa2.31□□□□□ -2.04
CSF1YLR087C PRP28P23394 588 aa2.31□□□□□ -2.04
CSF1YLR087C RML2P32611 393 aa2.31□□□□□ -2.04
CSF1YLR087C TKL2P33315 681 aa2.31□□□□□ -2.04
CSF1YLR087C WHI3P34761 661 aaKnown RBP2.31□□□□□ -2.04
CSF1YLR087C CTF13P35203 478 aa2.31□□□□□ -2.04
CSF1YLR087C RRP3P38712 501 aaKnown RBP2.31□□□□□ -2.04
CSF1YLR087C SEO1P39709 593 aa2.31□□□□□ -2.04
CSF1YLR087C ARC1P46672 376 aaKnown RBP2.31□□□□□ -2.04
CSF1YLR087C PRP24P49960 444 aaKnown RBP2.31□□□□□ -2.04
CSF1YLR087C YPL034WQ03083 165 aa2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms