RNA–Protein interactions for RNA: YKL061W

BLI1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeast

Gene BLI1, Length 342 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BLI1	YKL061W	BI3	Q9ZZW7	517 aa		1.34	□□□□□ -2.19
BLI1	YKL061W	ADH2	P00331	348 aa	Known RBP	1.33	□□□□□ -2.2
BLI1	YKL061W	GEX2	P36173	615 aa		1.33	□□□□□ -2.2
BLI1	YKL061W	MRP21	P38175	177 aa		1.33	□□□□□ -2.2
BLI1	YKL061W	VPS52	P39904	641 aa		1.33	□□□□□ -2.2
BLI1	YKL061W	NPR2	P39923	615 aa		1.33	□□□□□ -2.2
BLI1	YKL061W	SWP82	P43554	623 aa		1.33	□□□□□ -2.2
BLI1	YKL061W	YGL082W	P53155	381 aa		1.33	□□□□□ -2.2
BLI1	YKL061W	ELP3	Q02908	557 aa	Known RBP	1.33	□□□□□ -2.2
BLI1	YKL061W	TSA2	Q04120	196 aa		1.33	□□□□□ -2.2
BLI1	YKL061W	ATG26	Q06321	1198 aa		1.33	□□□□□ -2.2
BLI1	YKL061W	CRN1	Q06440	651 aa		1.33	□□□□□ -2.2
BLI1	YKL061W	MRPL35	Q06678	367 aa		1.33	□□□□□ -2.2
BLI1	YKL061W	YTA7	P40340	1379 aa		1.33	□□□□□ -2.2
BLI1	YKL061W	CCH1	P50077	2039 aa		1.32	□□□□□ -2.2
BLI1	YKL061W	KAR1	P11927	433 aa		1.32	□□□□□ -2.2
BLI1	YKL061W	PCL1	P24867	279 aa		1.32	□□□□□ -2.2
BLI1	YKL061W	SWI4	P25302	1093 aa	Known RBP	1.32	□□□□□ -2.2
BLI1	YKL061W	VPS17	P32913	551 aa		1.32	□□□□□ -2.2
BLI1	YKL061W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	1.32	□□□□□ -2.2	not detected
BLI1	YKL061W	AAP1	P37898	856 aa	Known RBP	1.32	□□□□□ -2.2
BLI1	YKL061W	ENT4	Q07872	247 aa		1.32	□□□□□ -2.2
BLI1	YKL061W	TRE2	Q08693	809 aa		1.32	□□□□□ -2.2
BLI1	YKL061W	ERV2	Q12284	196 aa		1.32	□□□□□ -2.2
BLI1	YKL061W	ADE3	P07245	946 aa	Known RBP	1.31	□□□□□ -2.2
BLI1	YKL061W	RIT1	P23796	513 aa		1.31	□□□□□ -2.2
BLI1	YKL061W	GCD7	P32502	381 aa	Predicted RBP	1.31	□□□□□ -2.2
BLI1	YKL061W	YNK1	P36010	153 aa	Known RBP	1.31	□□□□□ -2.2
BLI1	YKL061W	STT3	P39007	718 aa	Known RBP	1.31	□□□□□ -2.2
BLI1	YKL061W	RSM28	Q03430	361 aa		1.31	□□□□□ -2.2
BLI1	YKL061W	SWT1	Q12104	458 aa		1.31	□□□□□ -2.2
BLI1	YKL061W	ATR1	P13090	542 aa		1.3	□□□□□ -2.2
BLI1	YKL061W	RNA14	P25298	677 aa	Known RBP	1.3	□□□□□ -2.2
BLI1	YKL061W	ARP2	P32381	391 aa	Known RBP	1.3	□□□□□ -2.2
BLI1	YKL061W	TIF4631	P39935	952 aa	Known RBP	1.3	□□□□□ -2.2
BLI1	YKL061W	MAD3	P47074	515 aa		1.3	□□□□□ -2.2
BLI1	YKL061W	NNF2	P53253	936 aa		1.3	□□□□□ -2.2
BLI1	YKL061W	ARK1	P53974	638 aa		1.3	□□□□□ -2.2
BLI1	YKL061W	RLI1	Q03195	608 aa	Known RBP	1.3	□□□□□ -2.2
BLI1	YKL061W	PHM6	Q05637	104 aa		1.3	□□□□□ -2.2
BLI1	YKL061W	VAM6	Q07468	1049 aa		1.3	□□□□□ -2.2
BLI1	YKL061W	SNF3	P10870	884 aa		1.29	□□□□□ -2.2
BLI1	YKL061W	SIR1	P21691	654 aa		1.29	□□□□□ -2.2
BLI1	YKL061W	YIL067C	P40514	678 aa		1.29	□□□□□ -2.2
BLI1	YKL061W	HAL1	Q01766	294 aa		1.29	□□□□□ -2.2
BLI1	YKL061W	PBA1	Q05778	276 aa		1.29	□□□□□ -2.2
BLI1	YKL061W	YOL057W	Q08225	711 aa		1.29	□□□□□ -2.2
BLI1	YKL061W	PUT3	P25502	979 aa	Predicted RBP	1.28	□□□□□ -2.2
BLI1	YKL061W	CMK1	P27466	446 aa	Known RBP	1.28	□□□□□ -2.2
BLI1	YKL061W	CBF2	P32504	956 aa		1.28	□□□□□ -2.2
BLI1	YKL061W	UBA4	P38820	440 aa		1.28	□□□□□ -2.2
BLI1	YKL061W	CTF18	P49956	741 aa		1.28	□□□□□ -2.2
BLI1	YKL061W	SHY1	P53266	389 aa		1.28	□□□□□ -2.2
BLI1	YKL061W	SSK1	Q07084	712 aa		1.28	□□□□□ -2.2
BLI1	YKL061W	HHF1	P02309	103 aa	Known RBP	1.27	□□□□□ -2.21
BLI1	YKL061W	RVS161	P25343	265 aa	Known RBP	1.27	□□□□□ -2.21
BLI1	YKL061W	SGF29	P25554	259 aa		1.27	□□□□□ -2.21
BLI1	YKL061W	PGS1	P25578	521 aa		1.27	□□□□□ -2.21
BLI1	YKL061W	SNC1	P31109	117 aa		1.27	□□□□□ -2.21
BLI1	YKL061W	YBR071W	P38243	211 aa		1.27	□□□□□ -2.21
BLI1	YKL061W	ENP1	P38333	483 aa	Known RBP	1.27	□□□□□ -2.21
BLI1	YKL061W	ERR3	P42222	437 aa		1.27	□□□□□ -2.21
BLI1	YKL061W	CEG1	Q01159	459 aa	Predicted RBP	1.27	□□□□□ -2.21
BLI1	YKL061W	CSR1	Q06705	408 aa	Known RBP	1.27	□□□□□ -2.21
BLI1	YKL061W	CPR1	P14832	162 aa	Known RBP	1.26	□□□□□ -2.21
BLI1	YKL061W	TFC4	P33339	1025 aa		1.26	□□□□□ -2.21
BLI1	YKL061W	HCS1	P34243	683 aa		1.26	□□□□□ -2.21
BLI1	YKL061W	ESL2	P36168	1195 aa		1.26	□□□□□ -2.21
BLI1	YKL061W	BMT2	P38278	337 aa		1.26	□□□□□ -2.21
BLI1	YKL061W	SHO1	P40073	367 aa		1.26	□□□□□ -2.21
BLI1	YKL061W	ALG8	P40351	577 aa		1.26	□□□□□ -2.21
BLI1	YKL061W	RPN11	P43588	306 aa	Known RBP	1.26	□□□□□ -2.21
BLI1	YKL061W	CNM67	P53865	581 aa	Known RBP	1.26	□□□□□ -2.21
BLI1	YKL061W	INN1	P53901	409 aa		1.26	□□□□□ -2.21
BLI1	YKL061W	CIA1	Q05583	330 aa		1.26	□□□□□ -2.21
BLI1	YKL061W	ARP7	Q12406	477 aa		1.26	□□□□□ -2.21
BLI1	YKL061W	CTF3	Q12748	733 aa		1.26	□□□□□ -2.21
BLI1	YKL061W	SUP35	P05453	685 aa	Known RBP	1.25	□□□□□ -2.21
BLI1	YKL061W	BIK1	P11709	440 aa		1.25	□□□□□ -2.21
BLI1	YKL061W	CDC60	P26637	1090 aa	Known RBP	1.25	□□□□□ -2.21
BLI1	YKL061W	MID2	P36027	376 aa		1.25	□□□□□ -2.21
BLI1	YKL061W	ANS1	P38832	159 aa		1.25	□□□□□ -2.21
BLI1	YKL061W	YGR161W-C	Q3E744	92 aa		1.25	□□□□□ -2.21
BLI1	YKL061W	CAR1	P00812	333 aa	Known RBP	1.24	□□□□□ -2.21
BLI1	YKL061W	AMD1	P15274	810 aa	Known RBP	1.24	□□□□□ -2.21
BLI1	YKL061W	PAH1	P32567	862 aa		1.24	□□□□□ -2.21
BLI1	YKL061W	YKL097C	P34245	136 aa		1.24	□□□□□ -2.21
BLI1	YKL061W	UBP12	P39538	1254 aa		1.24	□□□□□ -2.21
BLI1	YKL061W	YIL161W	P40449	235 aa	Known RBP	1.24	□□□□□ -2.21
BLI1	YKL061W	YJR120W	P47157	116 aa		1.24	□□□□□ -2.21
BLI1	YKL061W	YPL014W	Q02606	381 aa		1.24	□□□□□ -2.21
BLI1	YKL061W	RRP6	Q12149	733 aa	Known RBP	1.24	□□□□□ -2.21
BLI1	YKL061W	SGV1	P23293	657 aa	Known RBP	1.23	□□□□□ -2.21
BLI1	YKL061W	ARO2	P28777	376 aa	Known RBP	1.23	□□□□□ -2.21
BLI1	YKL061W	REE1	P40893	198 aa		1.23	□□□□□ -2.21
BLI1	YKL061W	STR3	P53101	465 aa	Known RBP	1.23	□□□□□ -2.21
BLI1	YKL061W	COG6	P53959	839 aa		1.23	□□□□□ -2.21
BLI1	YKL061W	YMR027W	Q04371	470 aa		1.23	□□□□□ -2.21
BLI1	YKL061W	IWR1	Q07532	353 aa	Predicted RBP	1.23	□□□□□ -2.21
BLI1	YKL061W	APE1	P14904	514 aa		1.22	□□□□□ -2.21

Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms