RNA–Protein interactions for RNA: YJR041C

URB2, Protein required for normal metabolism of the rRNA primary transcript, yeast

Gene URB2, Length 3,525 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URB2	YJR041C	PLM2	Q04383	521 aa		3.03	□□□□□ -1.92
URB2	YJR041C	MMR1	Q06324	491 aa		3.03	□□□□□ -1.92
URB2	YJR041C	CRT10	Q08226	957 aa		3.03	□□□□□ -1.92
URB2	YJR041C	AHA1	Q12449	350 aa	Known RBP	3.03	□□□□□ -1.92
URB2	YJR041C	APN1	P22936	367 aa		3.03	□□□□□ -1.92
URB2	YJR041C	POT1	P27796	417 aa	Known RBP RIP-Chip data	3.03	□□□□□ -1.92	not detected
URB2	YJR041C	YKL100C	P34248	587 aa		3.03	□□□□□ -1.92
URB2	YJR041C	OTU2	P38747	307 aa	Known RBP	3.03	□□□□□ -1.92
URB2	YJR041C	PIH1	P38768	344 aa		3.03	□□□□□ -1.92
URB2	YJR041C	TWF1	P53250	332 aa		3.03	□□□□□ -1.92
URB2	YJR041C	WAR1	Q03631	944 aa		3.03	□□□□□ -1.92
URB2	YJR041C	AAC1	P04710	309 aa		3.02	□□□□□ -1.93
URB2	YJR041C	PET111	P08468	800 aa		3.02	□□□□□ -1.93
URB2	YJR041C	PCT1	P13259	424 aa		3.02	□□□□□ -1.93
URB2	YJR041C	FTH1	P38310	465 aa		3.02	□□□□□ -1.93
URB2	YJR041C	CAK1	P43568	368 aa	Predicted RBP	3.02	□□□□□ -1.93
URB2	YJR041C	DCP2	P53550	970 aa	Known RBP	3.02	□□□□□ -1.93
URB2	YJR041C	ATG4	P53867	494 aa		3.02	□□□□□ -1.93
URB2	YJR041C	CTF4	Q01454	927 aa		3.02	□□□□□ -1.93
URB2	YJR041C	MUK1	Q02866	612 aa		3.02	□□□□□ -1.93
URB2	YJR041C	ARO10	Q06408	635 aa		3.02	□□□□□ -1.93
URB2	YJR041C	YPL272C	Q08984	517 aa		3.02	□□□□□ -1.93
URB2	YJR041C	VPS54	Q12071	889 aa		3.02	□□□□□ -1.93
URB2	YJR041C	RPN5	Q12250	445 aa	Known RBP	3.02	□□□□□ -1.93
URB2	YJR041C	PPR1	P07272	904 aa	Predicted RBP	3.02	□□□□□ -1.93
URB2	YJR041C	IMG1	P25626	169 aa		3.02	□□□□□ -1.93
URB2	YJR041C	SYN8	P31377	255 aa		3.02	□□□□□ -1.93
URB2	YJR041C	TUL1	P36096	758 aa		3.02	□□□□□ -1.93
URB2	YJR041C	DLD2	P46681	530 aa	Known RBP	3.02	□□□□□ -1.93
URB2	YJR041C	CFT2	Q12102	859 aa	Predicted RBP	3.02	□□□□□ -1.93
URB2	YJR041C	SRP54	P20424	541 aa	Known RBP	3.02	□□□□□ -1.93
URB2	YJR041C	RNQ1	P25367	405 aa		3.02	□□□□□ -1.93
URB2	YJR041C	GMH1	P36125	273 aa		3.02	□□□□□ -1.93
URB2	YJR041C	PXL1	P36166	706 aa		3.02	□□□□□ -1.93
URB2	YJR041C	ECM10	P39987	644 aa		3.02	□□□□□ -1.93
URB2	YJR041C	ARG2	P40360	574 aa		3.02	□□□□□ -1.93
URB2	YJR041C	PTR3	P43606	678 aa		3.02	□□□□□ -1.93
URB2	YJR041C	RIA1	P53893	1110 aa		3.02	□□□□□ -1.93
URB2	YJR041C	INA17	Q02888	182 aa		3.02	□□□□□ -1.93
URB2	YJR041C	YDL073W	Q07454	984 aa		3.02	□□□□□ -1.93
URB2	YJR041C	YOR389W	Q08912	624 aa		3.02	□□□□□ -1.93
URB2	YJR041C	INP53	Q12271	1107 aa		3.02	□□□□□ -1.93
URB2	YJR041C	BUD14	P27637	709 aa		3.01	□□□□□ -1.93
URB2	YJR041C	MSP1	P28737	362 aa		3.01	□□□□□ -1.93
URB2	YJR041C	RPN2	P32565	945 aa	Known RBP	3.01	□□□□□ -1.93
URB2	YJR041C	ANS1	P38832	159 aa		3.01	□□□□□ -1.93
URB2	YJR041C	STU2	P46675	888 aa		3.01	□□□□□ -1.93
URB2	YJR041C	YGR111W	P53265	400 aa		3.01	□□□□□ -1.93
URB2	YJR041C	RAD33	Q04231	177 aa		3.01	□□□□□ -1.93
URB2	YJR041C	PML1	Q07930	204 aa	Predicted RBP	3.01	□□□□□ -1.93
URB2	YJR041C	REX3	Q12090	404 aa		3.01	□□□□□ -1.93
URB2	YJR041C	MRH1	Q12117	320 aa	Predicted RBP	3.01	□□□□□ -1.93
URB2	YJR041C	ATG9	Q12142	997 aa		3.01	□□□□□ -1.93
URB2	YJR041C	ZPS1	Q12512	249 aa		3.01	□□□□□ -1.93
URB2	YJR041C	SRV2	P17555	526 aa	Known RBP	3.01	□□□□□ -1.93
URB2	YJR041C	CPR2	P23285	205 aa		3.01	□□□□□ -1.93
URB2	YJR041C	STE11	P23561	717 aa		3.01	□□□□□ -1.93
URB2	YJR041C	HCM1	P25364	564 aa		3.01	□□□□□ -1.93
URB2	YJR041C	GSH1	P32477	678 aa		3.01	□□□□□ -1.93
URB2	YJR041C	SSE2	P32590	693 aa	Known RBP	3.01	□□□□□ -1.93
URB2	YJR041C	SIF2	P38262	535 aa		3.01	□□□□□ -1.93
URB2	YJR041C	VBA2	P38358	474 aa	Known RBP	3.01	□□□□□ -1.93
URB2	YJR041C	GND1	P38720	489 aa	Known RBP	3.01	□□□□□ -1.93
URB2	YJR041C	ATF1	P40353	525 aa		3.01	□□□□□ -1.93
URB2	YJR041C	DPB11	P47027	764 aa	Predicted RBP	3.01	□□□□□ -1.93
URB2	YJR041C	VPS73	P53142	486 aa	Known RBP	3.01	□□□□□ -1.93
URB2	YJR041C	COQ9	Q05779	260 aa		3.01	□□□□□ -1.93
URB2	YJR041C	TEN1	Q07921	160 aa		3.01	□□□□□ -1.93
URB2	YJR041C	YOL073C	Q08232	322 aa		3.01	□□□□□ -1.93
URB2	YJR041C	BAG7	Q12128	409 aa		3.01	□□□□□ -1.93
URB2	YJR041C	CHO2	P05374	869 aa	Known RBP	3.01	□□□□□ -1.93
URB2	YJR041C	LPD1	P09624	499 aa	Known RBP	3.01	□□□□□ -1.93
URB2	YJR041C	YBR144C	P34215	104 aa		3.01	□□□□□ -1.93
URB2	YJR041C	ICS2	P38284	255 aa		3.01	□□□□□ -1.93
URB2	YJR041C	TIF4631	P39935	952 aa	Known RBP	3.01	□□□□□ -1.93
URB2	YJR041C	MIT1	P40002	666 aa		3.01	□□□□□ -1.93
URB2	YJR041C	YFL015C	P43578	164 aa		3.01	□□□□□ -1.93
URB2	YJR041C	RHO5	P53879	331 aa	Known RBP	3.01	□□□□□ -1.93
URB2	YJR041C	NCS2	P53923	493 aa	Predicted RBP	3.01	□□□□□ -1.93
URB2	YJR041C	PFA5	Q03289	374 aa		3.01	□□□□□ -1.93
URB2	YJR041C	RQC1	Q05468	723 aa	Known RBP	3.01	□□□□□ -1.93
URB2	YJR041C	DCI1	Q08558	271 aa		3.01	□□□□□ -1.93
URB2	YJR041C	MRE11	P32829	692 aa		3	□□□□□ -1.93
URB2	YJR041C	AAP1	P37898	856 aa	Known RBP	3	□□□□□ -1.93
URB2	YJR041C	SEC31	P38968	1273 aa	Known RBP	3	□□□□□ -1.93
URB2	YJR041C	MRX1	P40050	688 aa		3	□□□□□ -1.93
URB2	YJR041C	COQ6	P53318	479 aa		3	□□□□□ -1.93
URB2	YJR041C	EFM6	P53970	246 aa		3	□□□□□ -1.93
URB2	YJR041C	HRD3	Q05787	833 aa		3	□□□□□ -1.93
URB2	YJR041C	TAF3	Q12297	353 aa		3	□□□□□ -1.93
URB2	YJR041C	YER145C-A	A0A023PYF4	145 aa		3	□□□□□ -1.93
URB2	YJR041C	PMA1	P05030	918 aa	Known RBP	3	□□□□□ -1.93
URB2	YJR041C	YIM1	P28625	365 aa		3	□□□□□ -1.93
URB2	YJR041C	PUP2	P32379	260 aa		3	□□□□□ -1.93
URB2	YJR041C	IMD2	P38697	523 aa	Known RBP	3	□□□□□ -1.93
URB2	YJR041C	YNG2	P38806	282 aa	Known RBP	3	□□□□□ -1.93
URB2	YJR041C	ELO1	P39540	310 aa		3	□□□□□ -1.93
URB2	YJR041C	FYV8	P46949	817 aa	Known RBP	3	□□□□□ -1.93
URB2	YJR041C	EOS1	P53938	366 aa		3	□□□□□ -1.93
URB2	YJR041C	VPS9	P54787	451 aa		3	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 39.9 ms