RNA–Protein interactions for RNA: YIL156W

UBP7, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeast

Gene UBP7, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP7	YIL156W	HNM1	P19807	563 aa		5.11	□□□□□ -1.59
UBP7	YIL156W	SMC2	P38989	1170 aa	Known RBP	5.11	□□□□□ -1.59
UBP7	YIL156W	PEX7	P39108	375 aa		5.11	□□□□□ -1.59
UBP7	YIL156W	INP52	P50942	1183 aa		5.11	□□□□□ -1.59
UBP7	YIL156W	VID30	P53076	958 aa		5.11	□□□□□ -1.59
UBP7	YIL156W	RPL6A	Q02326	176 aa	Known RBP	5.11	□□□□□ -1.59
UBP7	YIL156W	BUD22	Q04347	519 aa	Known RBP	5.11	□□□□□ -1.59
UBP7	YIL156W	SKI3	P17883	1432 aa	Known RBP	5.1	□□□□□ -1.59
UBP7	YIL156W	YML003W	P0CF16	290 aa		5.1	□□□□□ -1.59
UBP7	YIL156W	RAD51	P25454	400 aa		5.1	□□□□□ -1.59
UBP7	YIL156W	WBP1	P33767	430 aa	Known RBP	5.1	□□□□□ -1.59
UBP7	YIL156W	URM1	P40554	99 aa	Predicted RBP	5.1	□□□□□ -1.59
UBP7	YIL156W	ALK1	P43633	760 aa	Known RBP	5.1	□□□□□ -1.59
UBP7	YIL156W	YGR266W	P53326	701 aa		5.1	□□□□□ -1.59
UBP7	YIL156W	DIA2	Q08496	732 aa	Predicted RBP	5.1	□□□□□ -1.59
UBP7	YIL156W	UBX3	Q12229	455 aa		5.1	□□□□□ -1.59
UBP7	YIL156W	PET123	P17558	318 aa		5.1	□□□□□ -1.59
UBP7	YIL156W	CLC1	P17891	233 aa		5.1	□□□□□ -1.59
UBP7	YIL156W	LRE1	P25579	583 aa	Known RBP	5.1	□□□□□ -1.59
UBP7	YIL156W	YCR061W	P25639	631 aa		5.1	□□□□□ -1.59
UBP7	YIL156W	DSS4	P32601	143 aa		5.1	□□□□□ -1.59
UBP7	YIL156W	COS111	P38308	924 aa		5.1	□□□□□ -1.59
UBP7	YIL156W	MET12	P46151	657 aa		5.1	□□□□□ -1.59
UBP7	YIL156W	TEX1	P53851	422 aa	Known RBP	5.1	□□□□□ -1.59
UBP7	YIL156W	ABZ2	Q03266	374 aa		5.1	□□□□□ -1.59
UBP7	YIL156W	VTA1	Q06263	330 aa		5.1	□□□□□ -1.59
UBP7	YIL156W	PFK27	Q12471	397 aa	Predicted RBP	5.1	□□□□□ -1.59
UBP7	YIL156W	ARO3	P14843	370 aa	Known RBP	5.1	□□□□□ -1.59
UBP7	YIL156W	MRE11	P32829	692 aa		5.1	□□□□□ -1.59
UBP7	YIL156W	SEC66	P33754	206 aa		5.1	□□□□□ -1.59
UBP7	YIL156W	TCD2	P36101	447 aa	Known RBP	5.1	□□□□□ -1.59
UBP7	YIL156W	AGP2	P38090	596 aa		5.1	□□□□□ -1.59
UBP7	YIL156W	SLM4	P38247	162 aa		5.1	□□□□□ -1.59
UBP7	YIL156W	STR3	P53101	465 aa	Known RBP	5.1	□□□□□ -1.59
UBP7	YIL156W	PPM1	Q04081	328 aa		5.1	□□□□□ -1.59
UBP7	YIL156W	PEX19	Q07418	342 aa		5.1	□□□□□ -1.59
UBP7	YIL156W	YCR015C	P25616	317 aa		5.09	□□□□□ -1.59
UBP7	YIL156W	HXT3	P32466	567 aa	Known RBP	5.09	□□□□□ -1.59
UBP7	YIL156W	YME2	P32843	850 aa		5.09	□□□□□ -1.59
UBP7	YIL156W	MEF2	P39677	819 aa		5.09	□□□□□ -1.59
UBP7	YIL156W	TMN3	P40071	706 aa		5.09	□□□□□ -1.59
UBP7	YIL156W	YIL077C	P40508	320 aa		5.09	□□□□□ -1.59
UBP7	YIL156W	ARI1	P53111	347 aa	Known RBP	5.09	□□□□□ -1.59
UBP7	YIL156W	VTC3	Q02725	835 aa		5.09	□□□□□ -1.59
UBP7	YIL156W	YDR444W	Q04093	687 aa		5.09	□□□□□ -1.59
UBP7	YIL156W	GPN2	Q08726	347 aa	Predicted RBP	5.09	□□□□□ -1.59
UBP7	YIL156W	PRS5	Q12265	496 aa	Known RBP	5.09	□□□□□ -1.59
UBP7	YIL156W	CHS2	P14180	963 aa		5.09	□□□□□ -1.59
UBP7	YIL156W	PTC7	P38797	343 aa		5.09	□□□□□ -1.59
UBP7	YIL156W	YJL206C	P39529	758 aa		5.09	□□□□□ -1.59
UBP7	YIL156W	RIA1	P53893	1110 aa		5.09	□□□□□ -1.59
UBP7	YIL156W	RCM1	P53972	490 aa		5.09	□□□□□ -1.59
UBP7	YIL156W	INA17	Q02888	182 aa		5.09	□□□□□ -1.59
UBP7	YIL156W	YFT2	Q06676	274 aa		5.09	□□□□□ -1.59
UBP7	YIL156W	VPS54	Q12071	889 aa		5.09	□□□□□ -1.59
UBP7	YIL156W	PUT4	P15380	627 aa		5.08	□□□□□ -1.6
UBP7	YIL156W	VPS34	P22543	875 aa		5.08	□□□□□ -1.6
UBP7	YIL156W	PEX1	P24004	1043 aa		5.08	□□□□□ -1.6
UBP7	YIL156W	BUD5	P25300	642 aa	Predicted RBP	5.08	□□□□□ -1.6
UBP7	YIL156W	SPC110	P32380	944 aa		5.08	□□□□□ -1.6
UBP7	YIL156W	YUH1	P35127	236 aa		5.08	□□□□□ -1.6
UBP7	YIL156W	TIF5	P38431	405 aa	Known RBP	5.08	□□□□□ -1.6
UBP7	YIL156W	OYE3	P41816	400 aa	Predicted RBP	5.08	□□□□□ -1.6
UBP7	YIL156W	BOP3	P53958	396 aa		5.08	□□□□□ -1.6
UBP7	YIL156W	YML133C	Q03099	1374 aa		5.08	□□□□□ -1.6
UBP7	YIL156W	YLL067C	Q07888	1374 aa		5.08	□□□□□ -1.6
UBP7	YIL156W	YLL066C	Q99208	1374 aa		5.08	□□□□□ -1.6
UBP7	YIL156W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	5.08	□□□□□ -1.6	not detected
UBP7	YIL156W	CRM1	P30822	1084 aa	Known RBP	5.08	□□□□□ -1.6
UBP7	YIL156W	NTH1	P32356	751 aa		5.08	□□□□□ -1.6
UBP7	YIL156W	RML2	P32611	393 aa		5.08	□□□□□ -1.6
UBP7	YIL156W	CTM1	P38818	585 aa		5.08	□□□□□ -1.6
UBP7	YIL156W	SMC3	P47037	1230 aa		5.08	□□□□□ -1.6
UBP7	YIL156W	APT1	P49435	187 aa	Known RBP	5.08	□□□□□ -1.6
UBP7	YIL156W	IMD4	P50094	524 aa	Known RBP	5.08	□□□□□ -1.6
UBP7	YIL156W	MCP2	Q06567	569 aa		5.08	□□□□□ -1.6
UBP7	YIL156W	RLM1	Q12224	676 aa		5.08	□□□□□ -1.6
UBP7	YIL156W	TFB5	Q3E7C1	72 aa	Predicted RBP	5.08	□□□□□ -1.6
UBP7	YIL156W	YBT1	P32386	1661 aa		5.08	□□□□□ -1.6
UBP7	YIL156W	GAL7	P08431	366 aa		5.08	□□□□□ -1.6
UBP7	YIL156W	AFG1	P32317	509 aa		5.08	□□□□□ -1.6
UBP7	YIL156W	PDB1	P32473	366 aa	Known RBP	5.08	□□□□□ -1.6
UBP7	YIL156W	DEF1	P35732	738 aa	Known RBP	5.08	□□□□□ -1.6
UBP7	YIL156W	SER3	P40054	469 aa		5.08	□□□□□ -1.6
UBP7	YIL156W	EPL1	P43572	832 aa		5.08	□□□□□ -1.6
UBP7	YIL156W	AQR1	P53943	586 aa		5.08	□□□□□ -1.6
UBP7	YIL156W	ARV1	Q06541	321 aa		5.08	□□□□□ -1.6
UBP7	YIL156W	ATG23	Q06671	453 aa		5.08	□□□□□ -1.6
UBP7	YIL156W	HBT1	Q07653	1046 aa	Known RBP	5.08	□□□□□ -1.6
UBP7	YIL156W	TPO1	Q07824	586 aa		5.08	□□□□□ -1.6
UBP7	YIL156W	HIP1	P06775	603 aa		5.07	□□□□□ -1.6
UBP7	YIL156W	HCS1	P34243	683 aa		5.07	□□□□□ -1.6
UBP7	YIL156W	GDT1	P38301	280 aa	Predicted RBP	5.07	□□□□□ -1.6
UBP7	YIL156W	SEC31	P38968	1273 aa	Known RBP	5.07	□□□□□ -1.6
UBP7	YIL156W	IMO32	P53219	342 aa		5.07	□□□□□ -1.6
UBP7	YIL156W	FMP40	Q08968	688 aa	Predicted RBP	5.07	□□□□□ -1.6
UBP7	YIL156W	YDR061W	Q12298	539 aa		5.07	□□□□□ -1.6
UBP7	YIL156W	TAL1	P15019	335 aa	Known RBP	5.07	□□□□□ -1.6
UBP7	YIL156W	PDA1	P16387	420 aa	Known RBP	5.07	□□□□□ -1.6
UBP7	YIL156W	FEN2	P25621	512 aa	Known RBP	5.07	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms