RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W YDR132CQ03900 495 aa5.03□□□□□ -1.6
MSH1YHR120W BUD22Q04347 519 aaKnown RBP5.03□□□□□ -1.6
MSH1YHR120W ADY3Q07732 790 aa5.03□□□□□ -1.6
MSH1YHR120W ATG10Q07879 167 aa5.03□□□□□ -1.6
MSH1YHR120W NPP1P25353 742 aa5.02□□□□□ -1.61
MSH1YHR120W EMC1P25574 760 aa5.02□□□□□ -1.61
MSH1YHR120W PHO11P35842 467 aa5.02□□□□□ -1.61
MSH1YHR120W EAP1P36041 632 aaKnown RBP5.02□□□□□ -1.61
MSH1YHR120W UTH1P36135 365 aa5.02□□□□□ -1.61
MSH1YHR120W PHO12P38693 467 aa5.02□□□□□ -1.61
MSH1YHR120W YHL008CP38750 627 aa5.02□□□□□ -1.61
MSH1YHR120W MRM2P53123 320 aa5.02□□□□□ -1.61
MSH1YHR120W UBX4P54730 416 aa5.02□□□□□ -1.61
MSH1YHR120W PSR1Q07800 427 aa5.02□□□□□ -1.61
MSH1YHR120W HOS1Q12214 470 aa5.02□□□□□ -1.61
MSH1YHR120W LDB17Q12342 491 aa5.02□□□□□ -1.61
MSH1YHR120W YEL077CQ3E7X8 1277 aa5.02□□□□□ -1.61
MSH1YHR120W COX3P00420 269 aa5.02□□□□□ -1.61
MSH1YHR120W RPL24AP04449 155 aaKnown RBP5.02□□□□□ -1.61
MSH1YHR120W TYR1P20049 452 aa5.02□□□□□ -1.61
MSH1YHR120W YSP3P25036 478 aa5.02□□□□□ -1.61
MSH1YHR120W GID7P25569 745 aa5.02□□□□□ -1.61
MSH1YHR120W CIN8P27895 1000 aa5.02□□□□□ -1.61
MSH1YHR120W RAD14P28519 371 aa5.02□□□□□ -1.61
MSH1YHR120W NDI1P32340 513 aa5.02□□□□□ -1.61
MSH1YHR120W RIM1P32445 135 aaKnown RBP5.02□□□□□ -1.61
MSH1YHR120W KES1P35844 434 aaKnown RBP5.02□□□□□ -1.61
MSH1YHR120W LRP1P38801 184 aaKnown RBP5.02□□□□□ -1.61
MSH1YHR120W YJL070CP40361 888 aa5.02□□□□□ -1.61
MSH1YHR120W IAH1P41734 238 aa5.02□□□□□ -1.61
MSH1YHR120W GCN20P43535 752 aaKnown RBP5.02□□□□□ -1.61
MSH1YHR120W YNL143CP53908 130 aa5.02□□□□□ -1.61
MSH1YHR120W ATG17Q06410 417 aa5.02□□□□□ -1.61
MSH1YHR120W KCS1Q12494 1050 aa5.02□□□□□ -1.61
MSH1YHR120W FRT1Q99332 602 aa5.02□□□□□ -1.61
MSH1YHR120W SUC2P00724 532 aa5.02□□□□□ -1.61
MSH1YHR120W ATP2P00830 511 aaKnown RBP5.02□□□□□ -1.61
MSH1YHR120W TFC1P32367 649 aa5.02□□□□□ -1.61
MSH1YHR120W UBP14P38237 781 aaKnown RBP5.02□□□□□ -1.61
MSH1YHR120W STN1P38960 494 aa5.02□□□□□ -1.61
MSH1YHR120W MCP2Q06567 569 aa5.02□□□□□ -1.61
MSH1YHR120W GCY1P14065 312 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
MSH1YHR120W UBA1P22515 1024 aaKnown RBP5.01□□□□□ -1.61
MSH1YHR120W AMD2P22580 549 aa5.01□□□□□ -1.61
MSH1YHR120W YSC84P32793 468 aa5.01□□□□□ -1.61
MSH1YHR120W TDA11P38854 504 aa5.01□□□□□ -1.61
MSH1YHR120W TIM17P39515 158 aa5.01□□□□□ -1.61
MSH1YHR120W RPH1P39956 796 aa5.01□□□□□ -1.61
MSH1YHR120W SLX8P40072 274 aa5.01□□□□□ -1.61
MSH1YHR120W PEP8P40335 379 aa5.01□□□□□ -1.61
MSH1YHR120W SEC27P41811 889 aaKnown RBP5.01□□□□□ -1.61
MSH1YHR120W FAR3P46671 204 aa5.01□□□□□ -1.61
MSH1YHR120W MAD3P47074 515 aa5.01□□□□□ -1.61
MSH1YHR120W RNR4P49723 345 aaKnown RBP5.01□□□□□ -1.61
MSH1YHR120W SWC4P53201 476 aa5.01□□□□□ -1.61
MSH1YHR120W GSF2Q04697 403 aaKnown RBP5.01□□□□□ -1.61
MSH1YHR120W YDL129WQ07555 291 aa5.01□□□□□ -1.61
MSH1YHR120W SLD7Q08457 257 aa5.01□□□□□ -1.61
MSH1YHR120W RUP1Q12242 671 aa5.01□□□□□ -1.61
MSH1YHR120W SMI1P32566 505 aa5.01□□□□□ -1.61
MSH1YHR120W IMP3P32899 183 aaPredicted RBP5.01□□□□□ -1.61
MSH1YHR120W CTF13P35203 478 aa5.01□□□□□ -1.61
MSH1YHR120W GND1P38720 489 aaKnown RBP5.01□□□□□ -1.61
MSH1YHR120W RGI2P40188 164 aa5.01□□□□□ -1.61
MSH1YHR120W MAM33P40513 266 aa5.01□□□□□ -1.61
MSH1YHR120W RPS0BP46654 252 aaKnown RBP5.01□□□□□ -1.61
MSH1YHR120W EFM6P53970 246 aa5.01□□□□□ -1.61
MSH1YHR120W TAF11Q04226 346 aa5.01□□□□□ -1.61
MSH1YHR120W BCP1Q06338 283 aa5.01□□□□□ -1.61
MSH1YHR120W MCH5Q08777 521 aa5.01□□□□□ -1.61
MSH1YHR120W SPT15P13393 240 aaKnown RBP5□□□□□ -1.61
MSH1YHR120W POL30P15873 258 aaKnown RBP5□□□□□ -1.61
MSH1YHR120W URA10P30402 227 aa5□□□□□ -1.61
MSH1YHR120W SPT16P32558 1035 aaKnown RBP5□□□□□ -1.61
MSH1YHR120W YBR259WP38338 688 aa5□□□□□ -1.61
MSH1YHR120W SRP72P38688 640 aaKnown RBP5□□□□□ -1.61
MSH1YHR120W YPS6P40583 537 aa5□□□□□ -1.61
MSH1YHR120W YFL012WP43580 148 aa5□□□□□ -1.61
MSH1YHR120W FRE4P53746 719 aa5□□□□□ -1.61
MSH1YHR120W ASI1P54074 624 aa5□□□□□ -1.61
MSH1YHR120W TRS31Q03337 283 aa5□□□□□ -1.61
MSH1YHR120W YFT2Q06676 274 aa5□□□□□ -1.61
MSH1YHR120W BUD20Q08004 166 aaPredicted RBP5□□□□□ -1.61
MSH1YHR120W YPR202WQ08993 238 aa5□□□□□ -1.61
MSH1YHR120W SRO7Q12038 1033 aa5□□□□□ -1.61
MSH1YHR120W YKR104WP0CE69 306 aa5□□□□□ -1.61
MSH1YHR120W INO1P11986 533 aa5□□□□□ -1.61
MSH1YHR120W DGR2P32330 852 aa5□□□□□ -1.61
MSH1YHR120W SPR1P32603 445 aa5□□□□□ -1.61
MSH1YHR120W MRP8P35719 219 aa5□□□□□ -1.61
MSH1YHR120W RRP3P38712 501 aaKnown RBP5□□□□□ -1.61
MSH1YHR120W YPT35P38815 214 aaKnown RBP5□□□□□ -1.61
MSH1YHR120W CCT8P47079 568 aaKnown RBP5□□□□□ -1.61
MSH1YHR120W VMA10P48836 114 aaKnown RBP5□□□□□ -1.61
MSH1YHR120W SWS2P53937 143 aa5□□□□□ -1.61
MSH1YHR120W ADE12P80210 433 aaKnown RBP5□□□□□ -1.61
MSH1YHR120W TRM82Q03774 444 aa5□□□□□ -1.61
MSH1YHR120W CIA1Q05583 330 aa5□□□□□ -1.61
MSH1YHR120W HBT1Q07653 1046 aaKnown RBP5□□□□□ -1.61
MSH1YHR120W TMA46Q12000 345 aaKnown RBP5□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms