RNA–Protein interactions for RNA: YGR150C

CCM1, Transcript of Mitochondrial 15S rRNA-binding protein, yeast

Gene CCM1, Length 2,595 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCM1	YGR150C	EHT1	P38295	451 aa		3.37	□□□□□ -1.87
CCM1	YGR150C	PZF1	P39933	429 aa		3.37	□□□□□ -1.87
CCM1	YGR150C	FTR1	P40088	404 aa		3.37	□□□□□ -1.87
CCM1	YGR150C	ECM27	P47144	725 aa		3.37	□□□□□ -1.87
CCM1	YGR150C	YGL138C	P53122	345 aa		3.37	□□□□□ -1.87
CCM1	YGR150C	RMD9	P53140	646 aa	Known RBP	3.37	□□□□□ -1.87
CCM1	YGR150C	PNC1	P53184	216 aa	Known RBP	3.37	□□□□□ -1.87
CCM1	YGR150C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	3.37	□□□□□ -1.87	not detected
CCM1	YGR150C	HMO1	Q03973	246 aa	Known RBP	3.37	□□□□□ -1.87
CCM1	YGR150C	BCP1	Q06338	283 aa		3.37	□□□□□ -1.87
CCM1	YGR150C	SYT1	Q06836	1226 aa		3.37	□□□□□ -1.87
CCM1	YGR150C	STE3	P06783	470 aa		3.37	□□□□□ -1.87
CCM1	YGR150C	ARG80	P07249	177 aa		3.37	□□□□□ -1.87
CCM1	YGR150C	CBP1	P07252	654 aa		3.37	□□□□□ -1.87
CCM1	YGR150C	VPS33	P20795	691 aa		3.37	□□□□□ -1.87
CCM1	YGR150C	NDI1	P32340	513 aa		3.37	□□□□□ -1.87
CCM1	YGR150C	CTF8	P38877	133 aa		3.37	□□□□□ -1.87
CCM1	YGR150C	GTS1	P40956	396 aa		3.37	□□□□□ -1.87
CCM1	YGR150C	MMM1	P41800	426 aa		3.37	□□□□□ -1.87
CCM1	YGR150C	PFA3	P42836	336 aa		3.37	□□□□□ -1.87
CCM1	YGR150C	YJL132W	P47014	750 aa		3.37	□□□□□ -1.87
CCM1	YGR150C	YGR149W	P48236	432 aa		3.37	□□□□□ -1.87
CCM1	YGR150C	PRP31	P49704	494 aa	Predicted RBP	3.37	□□□□□ -1.87
CCM1	YGR150C	COS12	P53053	380 aa		3.37	□□□□□ -1.87
CCM1	YGR150C	VID30	P53076	958 aa		3.37	□□□□□ -1.87
CCM1	YGR150C	HST3	P53687	447 aa		3.37	□□□□□ -1.87
CCM1	YGR150C	YNL144C	P53907	740 aa		3.37	□□□□□ -1.87
CCM1	YGR150C	BOP3	P53958	396 aa		3.37	□□□□□ -1.87
CCM1	YGR150C	ARG5,6	Q01217	863 aa		3.37	□□□□□ -1.87
CCM1	YGR150C	REC102	Q02721	264 aa		3.37	□□□□□ -1.87
CCM1	YGR150C	MTG1	Q03151	367 aa	Predicted RBP	3.37	□□□□□ -1.87
CCM1	YGR150C	ACL4	Q03771	387 aa		3.37	□□□□□ -1.87
CCM1	YGR150C	BUD22	Q04347	519 aa	Known RBP	3.37	□□□□□ -1.87
CCM1	YGR150C	MSS116	P15424	664 aa	Known RBP	3.36	□□□□□ -1.87
CCM1	YGR150C	BOS1	P25385	244 aa		3.36	□□□□□ -1.87
CCM1	YGR150C	URK1	P27515	501 aa		3.36	□□□□□ -1.87
CCM1	YGR150C	MCM4	P30665	933 aa	Known RBP	3.36	□□□□□ -1.87
CCM1	YGR150C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	3.36	□□□□□ -1.87	not detected
CCM1	YGR150C	ASH1	P34233	588 aa		3.36	□□□□□ -1.87
CCM1	YGR150C	ECM4	P36156	370 aa		3.36	□□□□□ -1.87
CCM1	YGR150C	YHR078W	P38799	552 aa		3.36	□□□□□ -1.87
CCM1	YGR150C	AFG3	P39925	761 aa		3.36	□□□□□ -1.87
CCM1	YGR150C	SEC24	P40482	926 aa	Known RBP	3.36	□□□□□ -1.87
CCM1	YGR150C	YIR014W	P40570	242 aa		3.36	□□□□□ -1.87
CCM1	YGR150C	GCD14	P46959	383 aa	Predicted RBP	3.36	□□□□□ -1.87
CCM1	YGR150C	RPA34	P47006	233 aa	Predicted RBP	3.36	□□□□□ -1.87
CCM1	YGR150C	STR3	P53101	465 aa	Known RBP	3.36	□□□□□ -1.87
CCM1	YGR150C	RPT4	P53549	437 aa	Known RBP	3.36	□□□□□ -1.87
CCM1	YGR150C	PRM1	P53835	661 aa		3.36	□□□□□ -1.87
CCM1	YGR150C	ATC1	Q04005	294 aa		3.36	□□□□□ -1.87
CCM1	YGR150C	MUS81	Q04149	632 aa	Predicted RBP	3.36	□□□□□ -1.87
CCM1	YGR150C	RRB1	Q04225	511 aa	Known RBP	3.36	□□□□□ -1.87
CCM1	YGR150C	CSI1	Q04368	295 aa		3.36	□□□□□ -1.87
CCM1	YGR150C	YFH1	Q07540	174 aa		3.36	□□□□□ -1.87
CCM1	YGR150C	AIM41	Q12032	185 aa		3.36	□□□□□ -1.87
CCM1	YGR150C	AHC1	Q12433	566 aa		3.36	□□□□□ -1.87
CCM1	YGR150C	JIP3	O13555	125 aa		3.36	□□□□□ -1.87
CCM1	YGR150C	YBR085C-A	O43137	85 aa		3.36	□□□□□ -1.87
CCM1	YGR150C	SPO7	P18410	259 aa		3.36	□□□□□ -1.87
CCM1	YGR150C	IDH2	P28241	369 aa	Known RBP	3.36	□□□□□ -1.87
CCM1	YGR150C	SRB5	P32585	307 aa		3.36	□□□□□ -1.87
CCM1	YGR150C	SSE2	P32590	693 aa	Known RBP	3.36	□□□□□ -1.87
CCM1	YGR150C	SLX1	P38324	304 aa		3.36	□□□□□ -1.87
CCM1	YGR150C	SIP3	P38717	1229 aa		3.36	□□□□□ -1.87
CCM1	YGR150C	TOM71	P38825	639 aa	Known RBP	3.36	□□□□□ -1.87
CCM1	YGR150C	MNL1	P38888	796 aa		3.36	□□□□□ -1.87
CCM1	YGR150C	YGR012W	P53206	393 aa		3.36	□□□□□ -1.87
CCM1	YGR150C	INA17	Q02888	182 aa		3.36	□□□□□ -1.87
CCM1	YGR150C	CRF1	Q04930	467 aa		3.36	□□□□□ -1.87
CCM1	YGR150C	YLR455W	Q06188	304 aa		3.36	□□□□□ -1.87
CCM1	YGR150C	MCM21	Q06675	368 aa		3.36	□□□□□ -1.87
CCM1	YGR150C	CDA1	Q06702	301 aa		3.36	□□□□□ -1.87
CCM1	YGR150C	RLM1	Q12224	676 aa		3.36	□□□□□ -1.87
CCM1	YGR150C	TAF3	Q12297	353 aa		3.36	□□□□□ -1.87
CCM1	YGR150C	SFG1	Q12507	346 aa		3.36	□□□□□ -1.87
CCM1	YGR150C	GPM1	P00950	247 aa	Known RBP	3.35	□□□□□ -1.87
CCM1	YGR150C	SEC12	P11655	471 aa		3.35	□□□□□ -1.87
CCM1	YGR150C	SAM35	P14693	329 aa		3.35	□□□□□ -1.87
CCM1	YGR150C	PDA1	P16387	420 aa	Known RBP	3.35	□□□□□ -1.87
CCM1	YGR150C	TUP1	P16649	713 aa		3.35	□□□□□ -1.87
CCM1	YGR150C	NAR1	P23503	491 aa	Known RBP	3.35	□□□□□ -1.87
CCM1	YGR150C	PET18	P25362	215 aa		3.35	□□□□□ -1.87
CCM1	YGR150C	PDB1	P32473	366 aa	Known RBP	3.35	□□□□□ -1.87
CCM1	YGR150C	KKQ8	P36004	724 aa		3.35	□□□□□ -1.87
CCM1	YGR150C	YKL070W	P36087	169 aa		3.35	□□□□□ -1.87
CCM1	YGR150C	AGP2	P38090	596 aa		3.35	□□□□□ -1.87
CCM1	YGR150C	TCD1	P38756	429 aa		3.35	□□□□□ -1.87
CCM1	YGR150C	UTP18	P40362	594 aa	Predicted RBP	3.35	□□□□□ -1.87
CCM1	YGR150C	SDP1	P40479	209 aa		3.35	□□□□□ -1.87
CCM1	YGR150C	MSS2	P40990	351 aa		3.35	□□□□□ -1.87
CCM1	YGR150C	IMD4	P50094	524 aa	Known RBP	3.35	□□□□□ -1.87
CCM1	YGR150C	COP1	P53622	1201 aa	Known RBP	3.35	□□□□□ -1.87
CCM1	YGR150C	DSL1	P53847	754 aa		3.35	□□□□□ -1.87
CCM1	YGR150C	NAM8	Q00539	523 aa	Known RBP	3.35	□□□□□ -1.87
CCM1	YGR150C	UTP6	Q02354	440 aa	Known RBP	3.35	□□□□□ -1.87
CCM1	YGR150C	YDR179W-A	Q03983	463 aa		3.35	□□□□□ -1.87
CCM1	YGR150C	URC2	Q04411	772 aa		3.35	□□□□□ -1.87
CCM1	YGR150C	SSQ1	Q05931	657 aa	Predicted RBP	3.35	□□□□□ -1.87
CCM1	YGR150C	YLR173W	Q06247	608 aa		3.35	□□□□□ -1.87
CCM1	YGR150C	GPN2	Q08726	347 aa	Predicted RBP	3.35	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 17 ms