RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W ECI1Q05871 280 aa3.99□□□□□ -1.77
PRP18YGR006W UTP21Q06078 939 aaPredicted RBP3.99□□□□□ -1.77
PRP18YGR006W TSR2Q06672 205 aaKnown RBP3.99□□□□□ -1.77
PRP18YGR006W RTP1Q12751 981 aa3.99□□□□□ -1.77
PRP18YGR006W MF(ALPHA)1P01149 165 aa3.98□□□□□ -1.77
PRP18YGR006W GCN4P03069 281 aa3.98□□□□□ -1.77
PRP18YGR006W ARD1P07347 238 aaPredicted RBP3.98□□□□□ -1.77
PRP18YGR006W MRP7P12687 371 aa3.98□□□□□ -1.77
PRP18YGR006W RPB8P20436 146 aa3.98□□□□□ -1.77
PRP18YGR006W ASK1P35734 292 aa3.98□□□□□ -1.77
PRP18YGR006W TSC10P38342 320 aa3.98□□□□□ -1.77
PRP18YGR006W DBP8P38719 431 aa3.98□□□□□ -1.77
PRP18YGR006W AFG3P39925 761 aa3.98□□□□□ -1.77
PRP18YGR006W VRG4P40107 337 aa3.98□□□□□ -1.77
PRP18YGR006W GLO1P50107 326 aa3.98□□□□□ -1.77
PRP18YGR006W ERG26P53199 349 aaKnown RBP3.98□□□□□ -1.77
PRP18YGR006W MAK10Q02197 733 aa3.98□□□□□ -1.77
PRP18YGR006W NGL3Q03210 505 aa3.98□□□□□ -1.77
PRP18YGR006W EMI2Q04409 500 aaKnown RBP3.98□□□□□ -1.77
PRP18YGR006W ARP9Q05123 467 aa3.98□□□□□ -1.77
PRP18YGR006W GSH2Q08220 491 aa3.98□□□□□ -1.77
PRP18YGR006W CTI6Q08923 506 aa3.98□□□□□ -1.77
PRP18YGR006W AFT2Q08957 416 aa3.98□□□□□ -1.77
PRP18YGR006W FMP40Q08968 688 aaPredicted RBP3.98□□□□□ -1.77
PRP18YGR006W YPL272CQ08984 517 aa3.98□□□□□ -1.77
PRP18YGR006W HER1Q12276 1246 aa3.98□□□□□ -1.77
PRP18YGR006W SPE4Q12455 300 aa3.98□□□□□ -1.77
PRP18YGR006W CMK1P27466 446 aaKnown RBP3.97□□□□□ -1.77
PRP18YGR006W YIR016WP40572 265 aa3.97□□□□□ -1.77
PRP18YGR006W PTR3P43606 678 aa3.97□□□□□ -1.77
PRP18YGR006W MDV1P47025 714 aa3.97□□□□□ -1.77
PRP18YGR006W DSD1P53095 428 aa3.97□□□□□ -1.77
PRP18YGR006W SGF73P53165 657 aa3.97□□□□□ -1.77
PRP18YGR006W CTL1Q03220 320 aaKnown RBP3.97□□□□□ -1.77
PRP18YGR006W DPB4Q04603 196 aaKnown RBP3.97□□□□□ -1.77
PRP18YGR006W ATG26Q06321 1198 aa3.97□□□□□ -1.77
PRP18YGR006W LUC7Q07508 261 aaPredicted RBP3.97□□□□□ -1.77
PRP18YGR006W YEH1Q07804 573 aa3.97□□□□□ -1.77
PRP18YGR006W SDH5Q08230 162 aa3.97□□□□□ -1.77
PRP18YGR006W YOL159CQ08300 171 aa3.97□□□□□ -1.77
PRP18YGR006W UBX3Q12229 455 aa3.97□□□□□ -1.77
PRP18YGR006W ARG81P05085 880 aa3.96□□□□□ -1.78
PRP18YGR006W MET8P15807 274 aa3.96□□□□□ -1.78
PRP18YGR006W YCP4P25349 247 aaKnown RBP3.96□□□□□ -1.78
PRP18YGR006W PEP3P27801 918 aa3.96□□□□□ -1.78
PRP18YGR006W SSE2P32590 693 aaKnown RBP3.96□□□□□ -1.78
PRP18YGR006W MNN2P38069 597 aa3.96□□□□□ -1.78
PRP18YGR006W IRC8P47046 822 aa3.96□□□□□ -1.78
PRP18YGR006W MRX6P48564 524 aa3.96□□□□□ -1.78
PRP18YGR006W VID30P53076 958 aa3.96□□□□□ -1.78
PRP18YGR006W YGR066CP53242 292 aa3.96□□□□□ -1.78
PRP18YGR006W RBG2P53295 368 aaKnown RBP3.96□□□□□ -1.78
PRP18YGR006W SCW4P53334 386 aaKnown RBP3.96□□□□□ -1.78
PRP18YGR006W VPS75P53853 264 aa3.96□□□□□ -1.78
PRP18YGR006W YLR112WQ12130 139 aa3.96□□□□□ -1.78
PRP18YGR006W RGT2Q12300 763 aa3.96□□□□□ -1.78
PRP18YGR006W YJR112W-AQ3E743 109 aa3.96□□□□□ -1.78
PRP18YGR006W CBS1P14066 229 aa3.95□□□□□ -1.78
PRP18YGR006W BOS1P25385 244 aa3.95□□□□□ -1.78
PRP18YGR006W PUP3P25451 205 aaKnown RBP3.95□□□□□ -1.78
PRP18YGR006W PGS1P25578 521 aa3.95□□□□□ -1.78
PRP18YGR006W YBR144CP34215 104 aa3.95□□□□□ -1.78
PRP18YGR006W REG2P38232 338 aa3.95□□□□□ -1.78
PRP18YGR006W ICS2P38284 255 aa3.95□□□□□ -1.78
PRP18YGR006W YBR225WP38321 900 aa3.95□□□□□ -1.78
PRP18YGR006W LEU5P38702 357 aa3.95□□□□□ -1.78
PRP18YGR006W RGI2P40188 164 aa3.95□□□□□ -1.78
PRP18YGR006W LCL3P53153 274 aa3.95□□□□□ -1.78
PRP18YGR006W YNL234WP53857 426 aa3.95□□□□□ -1.78
PRP18YGR006W YNL181WP53878 407 aa3.95□□□□□ -1.78
PRP18YGR006W BOP3P53958 396 aa3.95□□□□□ -1.78
PRP18YGR006W RPT6Q01939 405 aaKnown RBP3.95□□□□□ -1.78
PRP18YGR006W IZH1Q03419 316 aa3.95□□□□□ -1.78
PRP18YGR006W ECM30Q06673 1274 aa3.95□□□□□ -1.78
PRP18YGR006W GRC3Q07845 632 aa3.95□□□□□ -1.78
PRP18YGR006W TEN1Q07921 160 aa3.95□□□□□ -1.78
PRP18YGR006W CIR2Q08822 631 aa3.95□□□□□ -1.78
PRP18YGR006W YPT6Q99260 215 aa3.95□□□□□ -1.78
PRP18YGR006W EDE1P34216 1381 aa3.94□□□□□ -1.78
PRP18YGR006W INH1P01097 85 aa3.94□□□□□ -1.78
PRP18YGR006W YPT1P01123 206 aaKnown RBP3.94□□□□□ -1.78
PRP18YGR006W CBP1P07252 654 aa3.94□□□□□ -1.78
PRP18YGR006W PUT2P07275 575 aa3.94□□□□□ -1.78
PRP18YGR006W BUD5P25300 642 aaPredicted RBP3.94□□□□□ -1.78
PRP18YGR006W OCA4P25366 362 aa3.94□□□□□ -1.78
PRP18YGR006W IMG1P25626 169 aa3.94□□□□□ -1.78
PRP18YGR006W YBL055CP34220 418 aaPredicted RBP3.94□□□□□ -1.78
PRP18YGR006W YKL100CP34248 587 aa3.94□□□□□ -1.78
PRP18YGR006W UBA4P38820 440 aa3.94□□□□□ -1.78
PRP18YGR006W ANS1P38832 159 aa3.94□□□□□ -1.78
PRP18YGR006W CCT6P39079 546 aa3.94□□□□□ -1.78
PRP18YGR006W PHO90P39535 881 aa3.94□□□□□ -1.78
PRP18YGR006W PCL6P40038 420 aa3.94□□□□□ -1.78
PRP18YGR006W NDE1P40215 560 aa3.94□□□□□ -1.78
PRP18YGR006W ESL1P40456 1118 aa3.94□□□□□ -1.78
PRP18YGR006W HXT9P40885 567 aa3.94□□□□□ -1.78
PRP18YGR006W ARF3P40994 183 aaRIP-Chip data3.94□□□□□ -1.78not detected
PRP18YGR006W RMD8P43620 662 aa3.94□□□□□ -1.78
PRP18YGR006W APT1P49435 187 aaKnown RBP3.94□□□□□ -1.78
PRP18YGR006W ARE2P53629 642 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 34.1 ms