RNA–Protein interactions for RNA: YGL098W

USE1, Transcript of Essential SNARE protein localized to the ER, yeastyeast

Gene USE1, Length 738 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USE1YGL098W GTF1P53260 183 aaPredicted RBP3.26□□□□□ -1.89
USE1YGL098W TEP1P53916 434 aa3.26□□□□□ -1.89
USE1YGL098W COG5P53951 403 aa3.26□□□□□ -1.89
USE1YGL098W ACS1Q01574 713 aa3.26□□□□□ -1.89
USE1YGL098W MAK10Q02197 733 aa3.26□□□□□ -1.89
USE1YGL098W YDR249CQ03787 373 aa3.26□□□□□ -1.89
USE1YGL098W MUS81Q04149 632 aaPredicted RBP3.26□□□□□ -1.89
USE1YGL098W GIS4Q04233 774 aa3.26□□□□□ -1.89
USE1YGL098W SPO20Q04359 397 aa3.26□□□□□ -1.89
USE1YGL098W PDR8Q06149 701 aa3.26□□□□□ -1.89
USE1YGL098W VPS74Q06385 345 aa3.26□□□□□ -1.89
USE1YGL098W YPR091CQ06833 770 aa3.26□□□□□ -1.89
USE1YGL098W NGL1Q08213 363 aaKnown RBP3.26□□□□□ -1.89
USE1YGL098W SSP2Q08646 371 aa3.26□□□□□ -1.89
USE1YGL098W FRE5Q08908 694 aa3.26□□□□□ -1.89
USE1YGL098W SMF3Q12078 473 aaPredicted RBP3.26□□□□□ -1.89
USE1YGL098W PSY3Q12318 242 aa3.26□□□□□ -1.89
USE1YGL098W ARP7Q12406 477 aa3.26□□□□□ -1.89
USE1YGL098W GRX6Q12438 231 aa3.26□□□□□ -1.89
USE1YGL098W SKM1Q12469 655 aa3.26□□□□□ -1.89
USE1YGL098W RRP12Q12754 1228 aaKnown RBP3.26□□□□□ -1.89
USE1YGL098W LAG2Q92325 660 aa3.26□□□□□ -1.89
USE1YGL098W MED11Q99278 115 aa3.26□□□□□ -1.89
USE1YGL098W SEC7P11075 2009 aaKnown RBP3.26□□□□□ -1.89
USE1YGL098W FOB1O13329 566 aa3.25□□□□□ -1.89
USE1YGL098W ATP2P00830 511 aaKnown RBP3.25□□□□□ -1.89
USE1YGL098W RPP2BP02400 110 aaKnown RBP3.25□□□□□ -1.89
USE1YGL098W RPP1AP05318 106 aaPredicted RBP3.25□□□□□ -1.89
USE1YGL098W GAL3P13045 520 aa3.25□□□□□ -1.89
USE1YGL098W CAP2P13517 287 aa3.25□□□□□ -1.89
USE1YGL098W CBF1P17106 351 aa3.25□□□□□ -1.89
USE1YGL098W KGD1P20967 1014 aaKnown RBP3.25□□□□□ -1.89
USE1YGL098W SAN1P22470 610 aa3.25□□□□□ -1.89
USE1YGL098W ATG22P25568 528 aa3.25□□□□□ -1.89
USE1YGL098W SEC1P30619 724 aaKnown RBP3.25□□□□□ -1.89
USE1YGL098W ATP7P30902 174 aa3.25□□□□□ -1.89
USE1YGL098W CCR4P31384 837 aaKnown RBP3.25□□□□□ -1.89
USE1YGL098W HYM1P32464 399 aa3.25□□□□□ -1.89
USE1YGL098W NAB2P32505 525 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89 RIP-Chip
USE1YGL098W SPR1P32603 445 aa3.25□□□□□ -1.89
USE1YGL098W IMP3P32899 183 aaPredicted RBP3.25□□□□□ -1.89
USE1YGL098W PGM1P33401 570 aaKnown RBP3.25□□□□□ -1.89
USE1YGL098W SIP2P34164 415 aaKnown RBP3.25□□□□□ -1.89
USE1YGL098W YKL133CP36066 463 aa3.25□□□□□ -1.89
USE1YGL098W BAP2P38084 609 aa3.25□□□□□ -1.89
USE1YGL098W CST26P38226 397 aa3.25□□□□□ -1.89
USE1YGL098W FMP23P38231 175 aa3.25□□□□□ -1.89
USE1YGL098W RRT2P38332 387 aa3.25□□□□□ -1.89
USE1YGL098W SRP72P38688 640 aaKnown RBP3.25□□□□□ -1.89
USE1YGL098W OCA5P38738 679 aa3.25□□□□□ -1.89
USE1YGL098W SBE22P38814 852 aa3.25□□□□□ -1.89
USE1YGL098W YHR219WP38900 624 aa3.25□□□□□ -1.89
USE1YGL098W PLB1P39105 664 aa3.25□□□□□ -1.89
USE1YGL098W DSS1P39112 969 aa3.25□□□□□ -1.89
USE1YGL098W PES4P39684 611 aa3.25□□□□□ -1.89
USE1YGL098W EXO1P39875 702 aa3.25□□□□□ -1.89
USE1YGL098W ECM10P39987 644 aa3.25□□□□□ -1.89
USE1YGL098W KRE29P40026 464 aa3.25□□□□□ -1.89
USE1YGL098W THO1P40040 218 aaKnown RBP3.25□□□□□ -1.89
USE1YGL098W YJR061WP40355 935 aa3.25□□□□□ -1.89
USE1YGL098W GTT1P40582 234 aa3.25□□□□□ -1.89
USE1YGL098W FAR3P46671 204 aa3.25□□□□□ -1.89
USE1YGL098W MNN5P46982 586 aa3.25□□□□□ -1.89
USE1YGL098W PRP24P49960 444 aaKnown RBP3.25□□□□□ -1.89
USE1YGL098W PYK2P52489 506 aaKnown RBP3.25□□□□□ -1.89
USE1YGL098W CWC23P52868 283 aaPredicted RBP3.25□□□□□ -1.89
USE1YGL098W TAD1P53065 400 aa3.25□□□□□ -1.89
USE1YGL098W NUT1P53114 1132 aa3.25□□□□□ -1.89
USE1YGL098W TWF1P53250 332 aa3.25□□□□□ -1.89
USE1YGL098W NOP19P53317 196 aaPredicted RBP3.25□□□□□ -1.89
USE1YGL098W YTP1P53584 459 aa3.25□□□□□ -1.89
USE1YGL098W KAP120Q02932 1032 aa3.25□□□□□ -1.89
USE1YGL098W YMR279CQ03263 540 aa3.25□□□□□ -1.89
USE1YGL098W SCS7Q03529 384 aa3.25□□□□□ -1.89
USE1YGL098W DLT1Q04216 342 aa3.25□□□□□ -1.89
USE1YGL098W YDR514CQ04408 483 aa3.25□□□□□ -1.89
USE1YGL098W ARP10Q04549 284 aa3.25□□□□□ -1.89
USE1YGL098W RNH1Q04740 348 aa3.25□□□□□ -1.89
USE1YGL098W FAR10Q06001 478 aa3.25□□□□□ -1.89
USE1YGL098W ASA1Q06822 443 aa3.25□□□□□ -1.89
USE1YGL098W PUN1Q06991 263 aa3.25□□□□□ -1.89
USE1YGL098W NDE2Q07500 545 aa3.25□□□□□ -1.89
USE1YGL098W LOT6Q07923 191 aa3.25□□□□□ -1.89
USE1YGL098W RSC58Q07979 502 aa3.25□□□□□ -1.89
USE1YGL098W RCL1Q08096 367 aaPredicted RBP3.25□□□□□ -1.89
USE1YGL098W ZEO1Q08245 113 aa3.25□□□□□ -1.89
USE1YGL098W TRE2Q08693 809 aa3.25□□□□□ -1.89
USE1YGL098W YOR342CQ12182 319 aa3.25□□□□□ -1.89
USE1YGL098W HAT1Q12341 374 aa3.25□□□□□ -1.89
USE1YGL098W DCN1Q12395 269 aa3.25□□□□□ -1.89
USE1YGL098W HMS1Q12398 434 aa3.25□□□□□ -1.89
USE1YGL098W ERP4Q12450 207 aa3.25□□□□□ -1.89
USE1YGL098W CYB2P00175 591 aa3.24□□□□□ -1.89
USE1YGL098W CBP2P03874 630 aaPredicted RBP3.24□□□□□ -1.89
USE1YGL098W COX4P04037 155 aa3.24□□□□□ -1.89
USE1YGL098W GAL1P04385 528 aa3.24□□□□□ -1.89
USE1YGL098W MET6P05694 767 aaKnown RBP3.24□□□□□ -1.89
USE1YGL098W SNF1P06782 633 aaKnown RBP3.24□□□□□ -1.89
USE1YGL098W CBP6P07253 162 aaPredicted RBP3.24□□□□□ -1.89
USE1YGL098W RAD18P10862 487 aa3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms