RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C BPH1P25356 2167 aa2.4□□□□□ -2.03
PRE4YFR050C PHO5P00635 467 aa2.39□□□□□ -2.03
PRE4YFR050C TPK2P06245 380 aa2.39□□□□□ -2.03
PRE4YFR050C ADE5,7P07244 802 aaKnown RBP2.39□□□□□ -2.03
PRE4YFR050C TUP1P16649 713 aa2.39□□□□□ -2.03
PRE4YFR050C PRE4P30657 266 aa2.39□□□□□ -2.03
PRE4YFR050C SIN4P32259 974 aa2.39□□□□□ -2.03
PRE4YFR050C UGP1P32861 499 aaKnown RBP2.39□□□□□ -2.03
PRE4YFR050C DHR2P36009 735 aaPredicted RBP2.39□□□□□ -2.03
PRE4YFR050C FLO10P36170 1169 aa2.39□□□□□ -2.03
PRE4YFR050C YMC2P38087 329 aa2.39□□□□□ -2.03
PRE4YFR050C FAT1P38225 669 aa2.39□□□□□ -2.03
PRE4YFR050C VHC1P38329 1120 aa2.39□□□□□ -2.03
PRE4YFR050C CRG1P38892 291 aaRIP-Chip data2.39□□□□□ -2.03not detected
PRE4YFR050C PAC2P39937 518 aa2.39□□□□□ -2.03
PRE4YFR050C EAF5P39995 279 aa2.39□□□□□ -2.03
PRE4YFR050C YEN1P40028 759 aa2.39□□□□□ -2.03
PRE4YFR050C ALK1P43633 760 aaKnown RBP2.39□□□□□ -2.03
PRE4YFR050C YJR030CP47101 745 aa2.39□□□□□ -2.03
PRE4YFR050C ASN1P49089 572 aaKnown RBP2.39□□□□□ -2.03
PRE4YFR050C FLC3P53121 802 aa2.39□□□□□ -2.03
PRE4YFR050C TOF2Q02208 771 aa2.39□□□□□ -2.03
PRE4YFR050C CEF1Q03654 590 aaPredicted RBP2.39□□□□□ -2.03
PRE4YFR050C INP2Q03824 705 aa2.39□□□□□ -2.03
PRE4YFR050C COQ11Q05892 277 aa2.39□□□□□ -2.03
PRE4YFR050C CRD1Q07560 283 aa2.39□□□□□ -2.03
PRE4YFR050C TRE2Q08693 809 aa2.39□□□□□ -2.03
PRE4YFR050C YPL216WQ08964 1102 aa2.39□□□□□ -2.03
PRE4YFR050C SGT2Q12118 346 aaKnown RBP2.39□□□□□ -2.03
PRE4YFR050C ARP6Q12509 438 aa2.39□□□□□ -2.03
PRE4YFR050C COQ1P18900 473 aa2.38□□□□□ -2.03
PRE4YFR050C VPS34P22543 875 aa2.38□□□□□ -2.03
PRE4YFR050C PIH1P38768 344 aa2.38□□□□□ -2.03
PRE4YFR050C MIT1P40002 666 aa2.38□□□□□ -2.03
PRE4YFR050C FTR1P40088 404 aa2.38□□□□□ -2.03
PRE4YFR050C PRM2P40534 656 aa2.38□□□□□ -2.03
PRE4YFR050C POL31P46957 487 aa2.38□□□□□ -2.03
PRE4YFR050C YIP4P53093 235 aa2.38□□□□□ -2.03
PRE4YFR050C YGR054WP53235 642 aaKnown RBP2.38□□□□□ -2.03
PRE4YFR050C LSB1P53281 241 aa2.38□□□□□ -2.03
PRE4YFR050C SNF12P53628 566 aa2.38□□□□□ -2.03
PRE4YFR050C IOC4Q04213 475 aa2.38□□□□□ -2.03
PRE4YFR050C HLR1Q04429 423 aa2.38□□□□□ -2.03
PRE4YFR050C COQ9Q05779 260 aa2.38□□□□□ -2.03
PRE4YFR050C ULA1Q12059 462 aa2.38□□□□□ -2.03
PRE4YFR050C GAL80P04387 435 aa2.37□□□□□ -2.03
PRE4YFR050C ERG11P10614 530 aa2.37□□□□□ -2.03
PRE4YFR050C CDC26P14724 124 aa2.37□□□□□ -2.03
PRE4YFR050C ACO1P19414 778 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
PRE4YFR050C AEP2P22136 580 aa2.37□□□□□ -2.03
PRE4YFR050C CPR3P25719 182 aa2.37□□□□□ -2.03
PRE4YFR050C MF(ALPHA)2P32435 120 aa2.37□□□□□ -2.03
PRE4YFR050C DAL3P32459 195 aa2.37□□□□□ -2.03
PRE4YFR050C KRE6P32486 720 aa2.37□□□□□ -2.03
PRE4YFR050C ELO1P39540 310 aa2.37□□□□□ -2.03
PRE4YFR050C PES4P39684 611 aa2.37□□□□□ -2.03
PRE4YFR050C SER33P40510 469 aa2.37□□□□□ -2.03
PRE4YFR050C SPC105P53148 917 aa2.37□□□□□ -2.03
PRE4YFR050C ARK1P53974 638 aa2.37□□□□□ -2.03
PRE4YFR050C YPL014WQ02606 381 aa2.37□□□□□ -2.03
PRE4YFR050C YPL113CQ02961 396 aa2.37□□□□□ -2.03
PRE4YFR050C THI7Q05998 598 aa2.37□□□□□ -2.03
PRE4YFR050C CSR1Q06705 408 aaKnown RBP2.37□□□□□ -2.03
PRE4YFR050C NGL1Q08213 363 aaKnown RBP2.37□□□□□ -2.03
PRE4YFR050C YOR387CQ08910 206 aa2.37□□□□□ -2.03
PRE4YFR050C SRO7Q12038 1033 aa2.37□□□□□ -2.03
PRE4YFR050C NOP56Q12460 504 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
PRE4YFR050C ZPS1Q12512 249 aa2.37□□□□□ -2.03
PRE4YFR050C SEC12P11655 471 aa2.36□□□□□ -2.03
PRE4YFR050C SEC63P14906 663 aa2.36□□□□□ -2.03
PRE4YFR050C TSR4P25040 408 aa2.36□□□□□ -2.03
PRE4YFR050C YCR006CP25350 157 aa2.36□□□□□ -2.03
PRE4YFR050C YMC1P32331 307 aa2.36□□□□□ -2.03
PRE4YFR050C HXT4P32467 576 aa2.36□□□□□ -2.03
PRE4YFR050C LOT5P34234 306 aa2.36□□□□□ -2.03
PRE4YFR050C EHT1P38295 451 aa2.36□□□□□ -2.03
PRE4YFR050C YAT2P40017 923 aa2.36□□□□□ -2.03
PRE4YFR050C PYK2P52489 506 aaKnown RBP2.36□□□□□ -2.03
PRE4YFR050C BUD17P53727 317 aa2.36□□□□□ -2.03
PRE4YFR050C ALG11P53954 548 aaKnown RBP2.36□□□□□ -2.03
PRE4YFR050C EFR3Q03653 782 aaKnown RBP2.36□□□□□ -2.03
PRE4YFR050C STP3Q05937 343 aa2.36□□□□□ -2.03
PRE4YFR050C MRD1Q06106 887 aaKnown RBP2.36□□□□□ -2.03
PRE4YFR050C YDL073WQ07454 984 aa2.36□□□□□ -2.03
PRE4YFR050C TGS1Q12052 315 aa2.36□□□□□ -2.03
PRE4YFR050C RRP6Q12149 733 aaKnown RBP2.36□□□□□ -2.03
PRE4YFR050C TUF1P02992 437 aaKnown RBP2.35□□□□□ -2.03
PRE4YFR050C KAR1P11927 433 aa2.35□□□□□ -2.03
PRE4YFR050C SRV2P17555 526 aaKnown RBP2.35□□□□□ -2.03
PRE4YFR050C MDM10P18409 493 aa2.35□□□□□ -2.03
PRE4YFR050C NUP1P20676 1076 aa2.35□□□□□ -2.03
PRE4YFR050C CAP1P28495 268 aaKnown RBP2.35□□□□□ -2.03
PRE4YFR050C RAD24P32641 659 aa2.35□□□□□ -2.03
PRE4YFR050C CDS1P38221 457 aa2.35□□□□□ -2.03
PRE4YFR050C ATG12P38316 186 aa2.35□□□□□ -2.03
PRE4YFR050C SRP68P38687 599 aaKnown RBP2.35□□□□□ -2.03
PRE4YFR050C GPP2P40106 250 aaKnown RBP2.35□□□□□ -2.03
PRE4YFR050C SEC24P40482 926 aaKnown RBP2.35□□□□□ -2.03
PRE4YFR050C FYV8P46949 817 aaKnown RBP2.35□□□□□ -2.03
PRE4YFR050C JHD2P47156 728 aaPredicted RBP2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 24.9 ms