RNA–Protein interactions for RNA: YEL012W

UBC8, Transcript of Ubiquitin-conjugating enzyme that regulates gluconeogenesis, yeast

Gene UBC8, Length 657 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC8	YEL012W	YIL077C	P40508	320 aa		4.44	□□□□□ -1.7
UBC8	YEL012W	RFX1	P48743	811 aa		4.44	□□□□□ -1.7
UBC8	YEL012W	CIA1	Q05583	330 aa		4.44	□□□□□ -1.7
UBC8	YEL012W	YFT2	Q06676	274 aa		4.44	□□□□□ -1.7
UBC8	YEL012W	MLH2	Q07980	695 aa		4.44	□□□□□ -1.7
UBC8	YEL012W	PSK2	Q08217	1101 aa		4.44	□□□□□ -1.7
UBC8	YEL012W	DBP10	Q12389	995 aa	Known RBP	4.44	□□□□□ -1.7
UBC8	YEL012W	UTP20	P35194	2493 aa	Known RBP	4.44	□□□□□ -1.7
UBC8	YEL012W	FOB1	O13329	566 aa		4.43	□□□□□ -1.7
UBC8	YEL012W	URA3	P03962	267 aa		4.43	□□□□□ -1.7
UBC8	YEL012W	MSF1	P08425	469 aa		4.43	□□□□□ -1.7
UBC8	YEL012W	ARG1	P22768	420 aa		4.43	□□□□□ -1.7
UBC8	YEL012W	SAT4	P25333	603 aa	Known RBP	4.43	□□□□□ -1.7
UBC8	YEL012W	MVD1	P32377	396 aa	Known RBP	4.43	□□□□□ -1.7
UBC8	YEL012W	CBF2	P32504	956 aa		4.43	□□□□□ -1.7
UBC8	YEL012W	XRS2	P33301	854 aa		4.43	□□□□□ -1.7
UBC8	YEL012W	MAL33	P38157	468 aa		4.43	□□□□□ -1.7
UBC8	YEL012W	WSC4	P38739	605 aa		4.43	□□□□□ -1.7
UBC8	YEL012W	FHL1	P39521	936 aa		4.43	□□□□□ -1.7
UBC8	YEL012W	SWD1	P39706	426 aa		4.43	□□□□□ -1.7
UBC8	YEL012W	SAW1	P39735	261 aa		4.43	□□□□□ -1.7
UBC8	YEL012W	SDS3	P40505	327 aa		4.43	□□□□□ -1.7
UBC8	YEL012W	ASG7	P46993	209 aa		4.43	□□□□□ -1.7
UBC8	YEL012W	MAD3	P47074	515 aa		4.43	□□□□□ -1.7
UBC8	YEL012W	PAN2	P53010	1115 aa	Predicted RBP	4.43	□□□□□ -1.7
UBC8	YEL012W	FHN1	P53279	174 aa		4.43	□□□□□ -1.7
UBC8	YEL012W	TEP1	P53916	434 aa		4.43	□□□□□ -1.7
UBC8	YEL012W	TIM8	P57744	87 aa		4.43	□□□□□ -1.7
UBC8	YEL012W	VMS1	Q04311	632 aa	Known RBP	4.43	□□□□□ -1.7
UBC8	YEL012W	YCG1	Q06680	1035 aa		4.43	□□□□□ -1.7
UBC8	YEL012W	DIA2	Q08496	732 aa	Predicted RBP	4.43	□□□□□ -1.7
UBC8	YEL012W	ABP140	Q08641	628 aa	Known RBP	4.43	□□□□□ -1.7
UBC8	YEL012W	MLH3	Q12083	715 aa		4.43	□□□□□ -1.7
UBC8	YEL012W	YPL150W	Q12152	901 aa		4.43	□□□□□ -1.7
UBC8	YEL012W	ALG7	P07286	448 aa		4.42	□□□□□ -1.7
UBC8	YEL012W	FPR1	P20081	114 aa	Known RBP	4.42	□□□□□ -1.7
UBC8	YEL012W	CWH43	P25618	953 aa		4.42	□□□□□ -1.7
UBC8	YEL012W	CDC15	P27636	974 aa		4.42	□□□□□ -1.7
UBC8	YEL012W	DSS4	P32601	143 aa		4.42	□□□□□ -1.7
UBC8	YEL012W	SDS22	P36047	338 aa		4.42	□□□□□ -1.7
UBC8	YEL012W	SRX1	P36077	127 aa		4.42	□□□□□ -1.7
UBC8	YEL012W	SHE3	P38272	425 aa	Known RBP	4.42	□□□□□ -1.7
UBC8	YEL012W	EHT1	P38295	451 aa		4.42	□□□□□ -1.7
UBC8	YEL012W	SPC72	P39723	622 aa		4.42	□□□□□ -1.7
UBC8	YEL012W	YPS6	P40583	537 aa		4.42	□□□□□ -1.7
UBC8	YEL012W	CDC1	P40986	491 aa		4.42	□□□□□ -1.7
UBC8	YEL012W	TOS3	P43637	560 aa		4.42	□□□□□ -1.7
UBC8	YEL012W	GUF1	P46943	645 aa		4.42	□□□□□ -1.7
UBC8	YEL012W	TAN1	P53072	289 aa	Predicted RBP	4.42	□□□□□ -1.7
UBC8	YEL012W	COQ6	P53318	479 aa		4.42	□□□□□ -1.7
UBC8	YEL012W	FDC1	Q03034	503 aa		4.42	□□□□□ -1.7
UBC8	YEL012W	DDC1	Q08949	612 aa		4.42	□□□□□ -1.7
UBC8	YEL012W	CHS5	Q12114	671 aa	Known RBP	4.42	□□□□□ -1.7
UBC8	YEL012W	PPR1	P07272	904 aa	Predicted RBP	4.41	□□□□□ -1.7
UBC8	YEL012W	PRP28	P23394	588 aa		4.41	□□□□□ -1.7
UBC8	YEL012W	RDS1	P25611	832 aa		4.41	□□□□□ -1.7
UBC8	YEL012W	YCR015C	P25616	317 aa		4.41	□□□□□ -1.7
UBC8	YEL012W	DBF20	P32328	564 aa		4.41	□□□□□ -1.7
UBC8	YEL012W	EFB1	P32471	206 aa	Known RBP	4.41	□□□□□ -1.7
UBC8	YEL012W	TFB1	P32776	642 aa		4.41	□□□□□ -1.7
UBC8	YEL012W	PHO11	P35842	467 aa		4.41	□□□□□ -1.7
UBC8	YEL012W	PHO12	P38693	467 aa		4.41	□□□□□ -1.7
UBC8	YEL012W	FMP52	P40008	231 aa		4.41	□□□□□ -1.7
UBC8	YEL012W	DSE1	P40077	573 aa		4.41	□□□□□ -1.7
UBC8	YEL012W	PIG2	P40187	538 aa		4.41	□□□□□ -1.7
UBC8	YEL012W	SMC3	P47037	1230 aa		4.41	□□□□□ -1.7
UBC8	YEL012W	TAH11	P47112	604 aa		4.41	□□□□□ -1.7
UBC8	YEL012W	YNL144C	P53907	740 aa		4.41	□□□□□ -1.7
UBC8	YEL012W	SVL3	Q03088	825 aa	Known RBP	4.41	□□□□□ -1.7
UBC8	YEL012W	VPS20	Q04272	221 aa		4.41	□□□□□ -1.7
UBC8	YEL012W	YOL075C	Q08234	1294 aa		4.41	□□□□□ -1.7
UBC8	YEL012W	TCO89	Q08921	799 aa		4.41	□□□□□ -1.7
UBC8	YEL012W	NBP2	Q12163	236 aa		4.41	□□□□□ -1.7
UBC8	YEL012W	ZRT2	Q12436	422 aa		4.41	□□□□□ -1.7
UBC8	YEL012W	RAD3	P06839	778 aa		4.4	□□□□□ -1.71
UBC8	YEL012W	NAT1	P12945	854 aa	Known RBP	4.4	□□□□□ -1.71
UBC8	YEL012W	CDC42	P19073	191 aa		4.4	□□□□□ -1.71
UBC8	YEL012W	LRE1	P25579	583 aa	Known RBP	4.4	□□□□□ -1.71
UBC8	YEL012W	CAP1	P28495	268 aa	Known RBP	4.4	□□□□□ -1.71
UBC8	YEL012W	PMI40	P29952	429 aa	Known RBP	4.4	□□□□□ -1.71
UBC8	YEL012W	SWI3	P32591	825 aa		4.4	□□□□□ -1.71
UBC8	YEL012W	HIS7	P33734	552 aa	Known RBP	4.4	□□□□□ -1.71
UBC8	YEL012W	PRX1	P34227	261 aa	Known RBP	4.4	□□□□□ -1.71
UBC8	YEL012W	EXO84	P38261	753 aa		4.4	□□□□□ -1.71
UBC8	YEL012W	BAT1	P38891	393 aa	Known RBP	4.4	□□□□□ -1.71
UBC8	YEL012W	HEM14	P40012	539 aa		4.4	□□□□□ -1.71
UBC8	YEL012W	KAP123	P40069	1113 aa	Known RBP	4.4	□□□□□ -1.71
UBC8	YEL012W	OSW5	P40219	148 aa		4.4	□□□□□ -1.71
UBC8	YEL012W	SHQ1	P40486	507 aa	Predicted RBP	4.4	□□□□□ -1.71
UBC8	YEL012W	ERR3	P42222	437 aa		4.4	□□□□□ -1.71
UBC8	YEL012W	MPS3	P47069	682 aa		4.4	□□□□□ -1.71
UBC8	YEL012W	YJR054W	P47114	497 aa		4.4	□□□□□ -1.71
UBC8	YEL012W	NPA3	P47122	385 aa		4.4	□□□□□ -1.71
UBC8	YEL012W	TOF2	Q02208	771 aa		4.4	□□□□□ -1.71
UBC8	YEL012W	RNT1	Q02555	471 aa		4.4	□□□□□ -1.71
UBC8	YEL012W	PIR3	Q03180	325 aa		4.4	□□□□□ -1.71
UBC8	YEL012W	MZM1	Q03429	123 aa	Predicted RBP	4.4	□□□□□ -1.71
UBC8	YEL012W	TRI1	Q05024	226 aa		4.4	□□□□□ -1.71
UBC8	YEL012W	DON1	Q05610	365 aa		4.4	□□□□□ -1.71
UBC8	YEL012W	HRD3	Q05787	833 aa		4.4	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 34.1 ms